ptar1 (ptar1)


Basic Information

Item Value
gene id ptar1
gene name ptar1
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 3606395 ~ 3621480 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039803137.1
CCTTTTGGTCATGTTACGCGTCATTAGGTGCCCTAAAGATGGCGGAGTcggaggaggaggtggacgTATTGGTCCAGAGAGTTGTCAAAGACATCACTAACGCCTTCAAAAGAAACCCCAACATTGATGAGATTGGTGTGATCCCGTGTCCAGAGGCCCGCTACAACCGCAGTCCCATTGTGTTGGTGGAGAACAAGCTGGGTGTTGAGAGCTGGTGTGTCAAGTTCCTGCTGCCGTATGTCCACAACAAGCTGCTGCTCTACCGCCAGCGCAAACACTGGCTGGAGAGGGAAGCTTTAGCGGATATCACTTGCACTCTGTTGCTGCTTAACCCGGACTTCACCACTGCATGGAATGTCAGGAAGGAGCTACTGCAGTGCGGAGTTCTTAACCCAGAGAAGGACCTCTATCTGGGCAAGCTGGCCCTCACCAAATTCCCCAAGAGCCCTGAGACTTGGATACACCGACGCTGGGTGCTGCAGCAGATCCTGCGTCAGTGCTCTGCTATGGGCCGGAAGCATCAGCAGGGTGAAGCGGAGCAGGCCGATGCGGAGAGGAGCCAGCAGCTCAGTGACCATCTGGCCAGGACCCTCCATCAAGAGATGAAGGTGTGCTCGGACGCTGCCTGCCGCTATCCCAGCAACTACAACGCCTGGTCCCACCGCATCTGGGTGCTGCAGCACATGGCCAAGGGCAACGTCAAGgtGTTCCATGATGAGCTGTCGTCGATGCGCCTCTGGGTGTCCATGCATGTGTCTGACCACAGCGGATTTCACTACCGCCAGTTCCTGCTTAAGGAGCTGATCACGGAGCTCTCCCAGACTCCAGCTTCCACCCCCCCCAGTTCGCCCCAGCGCCGGCACAGCCAAGTCCCTGACAgcagcccccccccacccagccAGGGCCCAGCCAACGGGGAGCTGTCGGGGGCGGAGGCCGCAGCAGAGGAGGACAGGCAGCTACTTCAACTCTTCCACCAGGAGGTGGAGTTGTGCTCAGACCTGATCCAGTCCTTCCCTGGTCACGAGACACTCTGGAGTCACAGGCGCCATGTCTTCTACCTGTGGCACCACTGGAGGACGGAGCACCAGCACCACCGCAGCAGCAATGGAGGCAACGCGTCGGTCCGCCTTAACAACAGTGACCCCACGCTGGCCGAGGTCGGTGCTCAAAGCTGCGCCGGCAGGGGGGAGAGTGTGAACGGACAGGGGCATGCTAGTGACGCTATGGAGGTGGACGGGGCGTCCTTGCCTGACCCGCGGGACAGCAAGCGACTGAAGAGAGGCGCCCTGCTGCCAGGCCCCCCCGCCCTGCCCTCTGAGCACAGCTTTGTGAGCGGTGTCCTGGACAGCTGCGGGAACCCCGAGCAGAGACGTTTCGCCCTGGCATACAGGAAGTGGTTAGACACTGTCATTGATCAGCAGCCTTGAGAGAGAACCGTTAGCCCACCAATCTCTCTCAACATTGAAGTTGCCTTTAGACACAGATTTAGGATCAGCTTCCCTACCTGTAGCGCTGACTTTAACCAATAGTGATTCAGATGCAGTGATGACTTTAGAAACCAGTCCCAGGGCAGCTCCTGACAGTGGGGAGGGAGGGTAAGGAGGTTTTAACGACATCCTGTCTGTTCTTCCTCTGAAACATCTGGATTCTCCTGAGCTTGATCTGAGCCAGTACCCCTTCAGAACGGAAATCTGCGCACACGGTTGGCTCGCTATGGGTCTGTTGGTAGATTCTCTTCTTATTCAAGATTTCTCCGTGCCTCAGGTCCAATTGccactgcttttgttttttagtgCCAGTTTGGCATTTATCTGCACATATTACTTTGTCTGTTCAAATATTTCAGCAAAGAAACTAAATGAATCGCATGTGTTGGGCCTGATTGGTTGGAATGCCAAAATAGCCAGTACTATATAAATGAATAAgccattaaataataatatgaaatgAGTAATCATATGACTAAAAAGAGTAGGATATATACATGACCCAATAAATtgtaacaaaatacaaaacattgttaaaacttcatttatttatttttaattatcataaagtgtttttttatccaTATATTCACAGTAACTGTTTTATTGGAGTTTTGTTTCAAACATTCTCGCTTTACAAAAGTCTGATTTCTCAAGCTGAGGGGGGCGGGGAGTGGAAACAGGAAAATGagatcaaaaaataattgaataagAGGCATTTTCAGCTATAATGTAGGGGAAATGAATTTCAATACAACTGGTCACTATGCAAGTAATGAAATATATAATttcacaattacattttatttattcatgtttgtttttaatttgattGGCCTTTTTGGAGTTAATGAACCCTTTATTAGATTAGAATGGAATGACAGTGGCTCTGATTGAATCCCATTGGTCTTTAATGATTGGTTGAAATGCCCTCAGCCCTCCCGTGTTGCAGAGGCAGGTGTTAAGCACAGCCAGATTCCCGTTCTTCTTTCAACTTCTATAGATTTCCATTCTGAAGGTGGTGACATTTATTAaccatgtcattttttttctccgtcTTGTGTTGGTCCTTGGTTGCTGCTCCTGCTCCATGTTACTGGTGAATATTGTCAGTATGTCCTAACTATGTAGCTAAGCGCTAAGTTACAGTAGCTTGCAACAGAAAGCCAAAAAGCTAGTTGTTAGCTAAATAACAGgttatatatgttgtataaaaATAACAGGTTACGTTGCTAACTTGCAAGTCTTACCTTCTGACAACCTGAAGCACTAAATCTATAGGCAGAGAAatgttagctttagcagtttaGCGGTATTGATGTTTGACTCTGAAGGATAGCGTGCTAGGGGAGTGACCCCCCCCCCGACATTCACTGGTGCTACATGCTGCCATTTCTACAACTACTTCCTCTGTTACAGGTGTGTAGTGTTCAACAGGTGAAAACTGAACAGCACTTTGGACTAATTGATGATACTATTTGTGGGGTATTATTGCTAAACTATTTTTGAAATATTGTCTGTTATTTTGCACCAGGCTAGTTAACCGTAGCCCTAGCTGCTTTATGTCACTACCTTGTACAAAAATAGAGGTAACCTCAAAAAGGTCAGTCTACATTCTGTCTAGAATAACTTCTAGCACTCCTTTTTAAAAATTGTAACATGCTATATCTGCACAGTCCATCCCTTCAATGATGTGGAAACTAAAAAAAGATAGCTCCTCCCACCACATTGTCTCATTCTATATTAATAAGGGAAGAATGGTATTCTTGAATTTGAATCTACACCAATCTGAAGTCACCTGCGTATTCCAGATAGTTGCTTAGAAAATGCATACAGGACTGCAGTTTGAATAGGATCCATCGTTCTGTTGCCCGACAATGTTAGAAGTTGTTGAGGGTTGTCAATGACACTATCAGCACACAAGTGAACAAATGCACACATTTACACAGATGATGTTGTTCCATCAGTGTAGCCATGGGCACATTGGCATTCACTATATGCACTATGTGGTCACATCTAAATGGCGTTCCAGTGGGCCCTTGATGCAGTTTGGGTGCCATCACCTATTTATGTCGAGGTTCCATTGGATTGCTTACATTGGCTCGTTCTTGAAGTGCACAGGCTGGCTAGCCAAAATGGCCTAGCTCCCCATTACACTGTCTCCATGTGCTTCCATGTAACCCTTAGCTTCTCTTAGAAACTACAATGTCAGAGTTATGAAGTCTAGATGCTCTGTCACCTCAAATCACTGTGTACAGGATCATAGAT
>XM_039803139.1
AGATGGCGGAGTcggaggaggaggtggacgTATTGGTCCAGAGAGTTGTCAAAGACATCACTAACGCCTTCAAAAGAAACCCCAACATcttcAGCAGCGTCCACAGAAGGAGCTCAAACTGTCCCACCGACATCCAAACCGGCTGTGGAAGATGAGCTGTGATGAGATTGGTGTGATCCCGTGTCCAGAGGCCCGCTACAACCGCAGTCCCATTGTGTTGGTGGAGAACAAGCTGGGTGTTGAGAGCTGGTGTGTCAAGTTCCTGCTGCCGTATGTCCACAACAAGCTGCTGCTCTACCGCCAGCGCAAACACTGGCTGGAGAGGGAAGCTTTAGCGGATATCACTTGCACTCTGTTGCTGCTTAACCCGGACTTCACCACTGCATGGAATGTCAGGAAGGAGCTACTGCAGTGCGGAGTTCTTAACCCAGAGAAGGACCTCTATCTGGGCAAGCTGGCCCTCACCAAATTCCCCAAGAGCCCTGAGACTTGGATACACCGACGCTGGGTGCTGCAGCAGATCCTGCGTCAGTGCTCTGCTATGGGCCGGAAGCATCAGCAGGGTGAAGCGGAGCAGGCCGATGCGGAGAGGAGCCAGCAGCTCAGTGACCATCTGGCCAGGACCCTCCATCAAGAGATGAAGGTGTGCTCGGACGCTGCCTGCCGCTATCCCAGCAACTACAACGCCTGGTCCCACCGCATCTGGGTGCTGCAGCACATGGCCAAGGGCAACGTCAAGgtGTTCCATGATGAGCTGTCGTCGATGCGCCTCTGGGTGTCCATGCATGTGTCTGACCACAGCGGATTTCACTACCGCCAGTTCCTGCTTAAGGAGCTGATCACGGAGCTCTCCCAGACTCCAGCTTCCACCCCCCCCAGTTCGCCCCAGCGCCGGCACAGCCAAGTCCCTGACAgcagcccccccccacccagccAGGGCCCAGCCAACGGGGAGCTGTCGGGGGCGGAGGCCGCAGCAGAGGAGGACAGGCAGCTACTTCAACTCTTCCACCAGGAGGTGGAGTTGTGCTCAGACCTGATCCAGTCCTTCCCTGGTCACGAGACACTCTGGAGTCACAGGCGCCATGTCTTCTACCTGTGGCACCACTGGAGGACGGAGCACCAGCACCACCGCAGCAGCAATGGAGGCAACGCGTCGGTCCGCCTTAACAACAGTGACCCCACGCTGGCCGAGGTCGGTGCTCAAAGCTGCGCCGGCAGGGGGGAGAGTGTGAACGGACAGGGGCATGCTAGTGACGCTATGGAGGTGGACGGGGCGTCCTTGCCTGACCCGCGGGACAGCAAGCGACTGAAGAGAGGCGCCCTGCTGCCAGGCCCCCCCGCCCTGCCCTCTGAGCACAGCTTTGTGAGCGGTGTCCTGGACAGCTGCGGGAACCCCGAGCAGAGACGTTTCGCCCTGGCATACAGGAAGTGGTTAGACACTGTCATTGATCAGCAGCCTTGAGAGAGAACCGTTAGCCCACCAATCTCTCTCAACATTGAAGTTGCCTTTAGACACAGATTTAGGATCAGCTTCCCTACCTGTAGCGCTGACTTTAACCAATAGTGATTCAGATGCAGTGATGACTTTAGAAACCAGTCCCAGGGCAGCTCCTGACAGTGGGGAGGGAGGGTAAGGAGGTTTTAACGACATCCTGTCTGTTCTTCCTCTGAAACATCTGGATTCTCCTGAGCTTGATCTGAGCCAGTACCCCTTCAGAACGGAAATCTGCGCACACGGTTGGCTCGCTATGGGTCTGTTGGTAGATTCTCTTCTTATTCAAGATTTCTCCGTGCCTCAGGTCCAATTGccactgcttttgttttttagtgCCAGTTTGGCATTTATCTGCACATATTACTTTGTCTGTTCAAATATTTCAGCAAAGAAACTAAATGAATCGCATGTGTTGGGCCTGATTGGTTGGAATGCCAAAATAGCCAGTACTATATAAATGAATAAgccattaaataataatatgaaatgAGTAATCATATGACTAAAAAGAGTAGGATATATACATGACCCAATAAATtgtaacaaaatacaaaacattgttaaaacttcatttatttatttttaattatcataaagtgtttttttatccaTATATTCACAGTAACTGTTTTATTGGAGTTTTGTTTCAAACATTCTCGCTTTACAAAAGTCTGATTTCTCAAGCTGAGGGGGGCGGGGAGTGGAAACAGGAAAATGagatcaaaaaataattgaataagAGGCATTTTCAGCTATAATGTAGGGGAAATGAATTTCAATACAACTGGTCACTATGCAAGTAATGAAATATATAATttcacaattacattttatttattcatgtttgtttttaatttgattGGCCTTTTTGGAGTTAATGAACCCTTTATTAGATTAGAATGGAATGACAGTGGCTCTGATTGAATCCCATTGGTCTTTAATGATTGGTTGAAATGCCCTCAGCCCTCCCGTGTTGCAGAGGCAGGTGTTAAGCACAGCCAGATTCCCGTTCTTCTTTCAACTTCTATAGATTTCCATTCTGAAGGTGGTGACATTTATTAaccatgtcattttttttctccgtcTTGTGTTGGTCCTTGGTTGCTGCTCCTGCTCCATGTTACTGGTGAATATTGTCAGTATGTCCTAACTATGTAGCTAAGCGCTAAGTTACAGTAGCTTGCAACAGAAAGCCAAAAAGCTAGTTGTTAGCTAAATAACAGgttatatatgttgtataaaaATAACAGGTTACGTTGCTAACTTGCAAGTCTTACCTTCTGACAACCTGAAGCACTAAATCTATAGGCAGAGAAatgttagctttagcagtttaGCGGTATTGATGTTTGACTCTGAAGGATAGCGTGCTAGGGGAGTGACCCCCCCCCCGACATTCACTGGTGCTACATGCTGCCATTTCTACAACTACTTCCTCTGTTACAGGTGTGTAGTGTTCAACAGGTGAAAACTGAACAGCACTTTGGACTAATTGATGATACTATTTGTGGGGTATTATTGCTAAACTATTTTTGAAATATTGTCTGTTATTTTGCACCAGGCTAGTTAACCGTAGCCCTAGCTGCTTTATGTCACTACCTTGTACAAAAATAGAGGTAACCTCAAAAAGGTCAGTCTACATTCTGTCTAGAATAACTTCTAGCACTCCTTTTTAAAAATTGTAACATGCTATATCTGCACAGTCCATCCCTTCAATGATGTGGAAACTAAAAAAAGATAGCTCCTCCCACCACATTGTCTCATTCTATATTAATAAGGGAAGAATGGTATTCTTGAATTTGAATCTACACCAATCTGAAGTCACCTGCGTATTCCAGATAGTTGCTTAGAAAATGCATACAGGACTGCAGTTTGAATAGGATCCATCGTTCTGTTGCCCGACAATGTTAGAAGTTGTTGAGGGTTGTCAATGACACTATCAGCACACAAGTGAACAAATGCACACATTTACACAGATGATGTTGTTCCATCAGTGTAGCCATGGGCACATTGGCATTCACTATATGCACTATGTGGTCACATCTAAATGGCGTTCCAGTGGGCCCTTGATGCAGTTTGGGTGCCATCACCTATTTATGTCGAGGTTCCATTGGATTGCTTACATTGGCTCGTTCTTGAAGTGCACAGGCTGGCTAGCCAAAATGGCCTAGCTCCCCATTACACTGTCTCCATGTGCTTCCATGTAACCCTTAGCTTCTCTTAGAAACTACAATGTCAGAGTTATGAAGTCTAGATGCTCTGTCACCTCAAATCACTGTGTACAGGATCATAGAT

Function

symbol description
ptar1 Predicted to enable protein prenyltransferase activity. Predicted to act upstream of or within protein prenylation. Orthologous to human PTAR1 (protein prenyltransferase alpha subunit repeat containing 1).

NR:

description
PREDICTED: protein prenyltransferase alpha subunit repeat-containing protein 1

GO:

id name namespace
GO:0018342 protein prenylation biological_process
GO:0008318 protein prenyltransferase activity molecular_function

KEGG:

id description
K14137 PTAR1; protein prenyltransferase alpha subunit repeat containing protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039803137.1 False 3758 mRNA 0.47 7 3606395 3621480
XM_039803139.1 True 3793 mRNA 0.47 8 3606395 3621444

Neighbor

gene id symbol gene type direction distance location
apba1a apba1 coding downstream 3237 3555073 ~ 3603158 (-)
LOC120561346 NA coding downstream 251448 3315816 ~ 3354947 (-)
LOC120561352 gcnt4 coding downstream 291192 3311067 ~ 3315203 (-)
LOC120561362 NA coding downstream 313088 3272451 ~ 3293307 (-)
traf2a traf1,LOC106956159,LOC103356465,LOC106930528,LOC103141905,LOC108249884,LOC102784265 coding downstream 394396 3196486 ~ 3211999 (-)
pias2 pias2 coding upstream 177552 3799032 ~ 3816820 (-)
ydjc ydjc coding upstream 208866 3830346 ~ 3844040 (-)
ak6 ak6 coding upstream 223162 3844642 ~ 3848510 (-)
isl1a isl1,LOC103469637,LOC107374027,LOC107661270,LOC103141950,LOC102231175 coding upstream 481537 4103017 ~ 4109223 (-)
LOC120560167 NA coding upstream 839949 4461429 ~ 4471480 (-)
G58966 NA non-coding downstream 86 3606062 ~ 3606309 (-)
G58943 NA non-coding downstream 81810 3524383 ~ 3524585 (-)
G58942 NA non-coding downstream 82791 3522846 ~ 3523604 (-)
G58940 NA non-coding downstream 83639 3521187 ~ 3522756 (-)
G58939 NA non-coding downstream 92254 3513631 ~ 3514141 (-)
G58996 NA non-coding upstream 114074 3735554 ~ 3735874 (-)
G58998 NA non-coding upstream 116062 3737542 ~ 3737785 (-)
G59000 LOC104943502 non-coding upstream 144711 3766191 ~ 3766435 (-)
LOC120561443 NA non-coding upstream 168940 3790420 ~ 3792518 (-)
G58995 LOC104961333,LOC107396654,LOC101067868,LOC102226353,LOC108248341,LOC107088009 non-coding upstream 196953 3818433 ~ 3827426 (-)
G58920 LOC106099046,LOC107687292,LOC107712180,LOC107663003 other downstream 189541 3415627 ~ 3416854 (-)
G58919 NA other downstream 208899 3397169 ~ 3397496 (-)
si:ch211-102c2.4 NA other downstream 366332 3232606 ~ 3240063 (-)
tnc tnc,LOC104930867,LOC103356464 other downstream 471846 3049669 ~ 3134549 (-)
LOC120561349 donson,LOC102310661 other downstream 759788 2834188 ~ 2846607 (-)
G58994 NA other upstream 67149 3688629 ~ 3689338 (-)
golph3a golph3,LOC103397487,LOC108249570 other upstream 588268 4209748 ~ 4224568 (-)
sub1b sub1 other upstream 802669 4424149 ~ 4430090 (-)
LOC120560375 NA other upstream 811364 4432844 ~ 4436316 (-)
LOC120561493 NA other upstream 1844743 5466223 ~ 5466437 (-)

Expression


Co-expression Network