LOC120560530


Basic Information

Item Value
gene id LOC120560530
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 14979874 ~ 14981617 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039803151.1
AGACAGCCTGTATATAAACTGTGACACAACACATCTGAGCATCACCTGTTTCCTGCGGCCGGCACAGCACCTCGAGTCTTCTGTTCGTCTCACGGCCACTCTCATCATGAATATAATCGTCACTTCGATGGATGGGACGCACCACACACAGACGGTGAACCCACAGTTCTCAGTGGGCTCTCTGAAAAACCTCATCCAGGAGACACTAGGAGTCCCCTTCCAGCAGCAGAAGCTCGTCTTGGTCAACGACCAGAAGACACTTCTCAGCGACGACTCAAAGACTCTCGAGTTCTACGGCTTACAGTCCGGCTCCCAGGTGTCCCTGCTAGTAACGGAGCCGGTGGTCCCGCCTGTGGTCCCGCCTGTGGCTCCTATCCAAGTGTTGCTCAGAAACGTTAACGGGGCTACGAAACCCTACGACGTCAACCCCGACGAGACCGTGAGCGACTTCAAGAGAAAAGTCCAGAACCGAGAGGGCGTTGCCGAGAGCCAGCAGCACCTCATCCACCAAGGCAAAGAGATGAGCACCGGTAGACTGTCCGACTACAAAGTCACAGCAGGAAGCCTCATCTTTCTGACTCTCCATTTAAGAGGAGGACATGGGTTAAACTAGGCTTTCGAACATTCTTTTAATTGCTGTCttattttttgttgcattgtCATGTTGAAAGAAGTATTCATCTATGTAACTATTTTATCTTaacaatctgttttttttttgctttaaccctcctgttgtcctcgg
>XM_039803152.1
AGTCACAGTCCGACTTCCAGGTGTTCCAGGTGTGCAGCATCACCTCTCTGTCGTCACAGTTACTGTCGCTAAGCAACTGAGCCCCTCAAAGCTGCAGCATCTCCTGGACCTCTTGGaggagaggcaggcaggagggcagacagacagaccatccgacagactgacagacagacagacagGCCACTCTCATCATGAATATAATCGTCACTTCGATGGATGGGACGCACCACACACAGACGGTGAACCCACAGTTCTCAGTGGGCTCTCTGAAAAACCTCATCCAGGAGACACTAGGAGTCCCCTTCCAGCAGCAGAAGCTCGTCTTGGTCAACGACCAGAAGACACTTCTCAGCGACGACTCAAAGACTCTCGAGTTCTACGGCTTACAGTCCGGCTCCCAGGTGTCCCTGCTAGTAACGGAGCCGGTGGTCCCGCCTGTGGTCCCGCCTGTGGCTCCTATCCAAGTGTTGCTCAGAAACGTTAACGGGGCTACGAAACCCTACGACGTCAACCCCGACGAGACCGTGAGCGACTTCAAGAGAAAAGTCCAGAACCGAGAGGGCGTTGCCGAGAGCCAGCAGCACCTCATCCACCAAGGCAAAGAGATGAGCACCGGTAGACTGTCCGACTACAAAGTCACAGCAGGAAGCCTCATCTTTCTGACTCTCCATTTAAGAGGAGGACATGGGTTAAACTAGGCTTTCGAACATTCTTTTAATTGCTGTCttattttttgttgcattgtCATGTTGAAAGAAGTATTCATCTATGTAACTATTTTATCTTaacaatctgttttttttttgctttaaccctcctgttgtcctcgg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039803151.1 False 745 mRNA 0.50 2 14980789 14981617
XM_039803152.1 True 830 mRNA 0.51 2 14979874 14981617

Neighbor

gene id symbol gene type direction distance location
c5 NA coding upstream 54937 14891572 ~ 14924937 (+)
prdm12b LOC102306279,LOC102776562,LOC102208027,LOC101478941 coding upstream 93420 14878628 ~ 14886454 (+)
LOC120560087 LOC103371518 coding upstream 112219 14842071 ~ 14867655 (+)
kazald3 kazald1,LOC107097908 coding upstream 207722 14767716 ~ 14772152 (+)
grin1b grin1,LOC101175170,LOC102209996,LOC108248095,LOC107386166,LOC101469542,LOC102312845 coding upstream 226474 14677671 ~ 14753400 (+)
lrrc2 LOC102210414 coding downstream 261233 15242850 ~ 15252339 (+)
mak16 mak16 coding downstream 316783 15298400 ~ 15306100 (+)
LOC120561495 NA coding downstream 316925 15298542 ~ 15298643 (+)
LOC120560841 ppp2cb,LOC100710281,LOC105920955,LOC101157601,LOC103131405 coding downstream 434839 15416456 ~ 15430582 (+)
LOC120560844 LOC104935222,LOC101481450,LOC102294942,LOC106534038,LOC108245882,LOC100710015,LOC107386134 coding downstream 454124 15435741 ~ 15467408 (+)
G61513 NA non-coding upstream 302502 14676137 ~ 14677372 (+)
G61468 NA non-coding upstream 480440 14499180 ~ 14499434 (+)
LOC120560938 NA non-coding upstream 480817 14497781 ~ 14499057 (+)
LOC120561032 NA non-coding upstream 507685 14469197 ~ 14472189 (+)
LOC120561034 NA non-coding upstream 514149 14465003 ~ 14465725 (+)
G61539 NA non-coding downstream 44824 15026441 ~ 15027400 (+)
G61540 NA non-coding downstream 45988 15027605 ~ 15027818 (+)
G61730 LOC102301232,LOC102776762,LOC101476977 non-coding downstream 164483 15146100 ~ 15152551 (+)
G61756 NA non-coding downstream 242497 15224114 ~ 15224465 (+)
G61754 NA non-coding downstream 242930 15224547 ~ 15224969 (+)
cntrl NA other upstream 77 14928373 ~ 14979797 (+)
surf4l surf4,LOC103397973,LOC102307728,LOC100699423,LOC101479701,LOC101465012 other upstream 183931 14774513 ~ 14795943 (+)
G61514 surf4,LOC103397973,LOC102307728,LOC100699423,LOC101479701,LOC101465012 other upstream 185272 14699525 ~ 14794602 (+)
LOC120561401 NA other upstream 217325 14755450 ~ 14762549 (+)
LOC120560925 NA other upstream 545277 14431330 ~ 14434597 (+)
G61535 LOC103368073 other downstream 97257 15078874 ~ 15083448 (+)
nudt18 nudt18,LOC104957221 other downstream 237520 15219137 ~ 15224015 (+)
spinb spin1,LOC103373448,LOC108245887,LOC101477468,LOC100698355,LOC106527790 other downstream 268127 15249744 ~ 15352625 (+)
zgc:101664 NA other downstream 450091 15431708 ~ 15434935 (+)
LOC120560526 NA other downstream 537163 15518780 ~ 15532796 (+)

Expression


Co-expression Network