LOC120560533


Basic Information

Item Value
gene id LOC120560533
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 14989147 ~ 14991145 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039803153.1
AAAAGCTGAAGTCAGCAgagtttttaaatgagaaatgagCTCTGTTGTGTTGCTGCGTTCCTTATctcatactttttcttttttactttagtACAAACTGCAGCTGCTCTTATAAAAGTACGTACTGTCGCCTGCAGTACAGTCTGTATACAATTGGTACTTCTGCCATACTAATGGTAGAATGGGTATTGTAACACACCCAGTATCTCTCTCAAACTCCTCCCAAGCACTGTTTTTAGATCAGAGCTTAATCTAGTCTCACTTCTCAGGAAGGGAGGCTCAGACAGTCGTTGTCACTGagcgagaggtgaaatggcgcagaaaggagttcagctggaccggGAAACTTTCTgttgttccatctgtctggatctactgaaggatccggtgactactccctgtggacacaACTACTGCATGGACTGTATTAAAAGTCACTTTGATGGAGAGGATTGTAAGTACATCTACAGCTGCCCTCAGTGCAGGAAGATGTTTACACGgaggcctgtcctgctgaaaaacaccatTTTAGAAGATTTAGTGGAGAtgctgaagaagactggactccaagctgctcctgctgatcactgctatgctggagctgaagatgtggcctgtgatgtctgcactgggagaaaactcaaagcaCACAAGTCCTGTCTGCAATGTCTGGCTTCTTTCTGTGAGAAACACCTTCAGCCTCATTATGAATCAGAGACAttcaagaaacacaagctggtggagccgtccaagaagctccaggagaacgtctgctctcgtcatgatgaggtgatgaagattttctgtcgtactgatcagcagcttatctgttCTCTCTGCTTAATGGAtgaacataaaggccacgacacagtctcagcagcagcagagagagctgagaggcagagagagctcgaggggagtcgacagaccatccagcagagaatccaggacagagagaaagatgtgaagctgcttcaacagcaggcggaggccatcaatctctctgctgataaagcagtggaggacagcgagaAGATCTTCACTGAGCTGATCCATCTCatggagaaaagaagctctgatgtgaagcagcaggtcagatcccagcagaaaagtgaagtgagtcgagtcagagagcttcaggagaagctggagcaggagatcactgagctgaagaggaaagacgctgagctgaagaagctctcacacacagaggatcacaaccagtttctacacaactacccctcactgtcaccactcagccaatcaacatccagcatccatatctgtcctctgagctgctttgaggacgtgacagcggccgtgtcagaagtcagagataaactacaggacgtcctgagagagaagtggacaaacgtctcactgacagggactgaagtggacgttttactgccacaaccagagcccaagaccagagctggattcttaaaatattcacgtgaaatcacgctggatccaaacacagtaaacacacatctgttattatctgaggggaacaggaCAGCAACGTTCATGGGAGAACAACAGtcttattctagtcacccagacagattcactgACTGGGAgcaggtcctgagtagagagagtctgactggacgttggtactgggaggtggagatgAGAGGAGGAGTTTATGTAGCAGTCGCTTACAggaatatcagcagagcaggggaGTCGGATGAATGTAGATTTGGACTaaatgacaaatcttgggcGTTAGAGTGTATCAACAACAGTTATACATTTTGGTACAACAAAGTCCAAACTCCCGTCTCAGGTcctgagtcctccagagtaggagtgtacctggatcacagtgcaggtattctgtccttctacagcgtctctgaaaccatgactctcctccgcagagtccagaccacattcactcagccgctcTATGCTGGACTAAGGGTTTATGGGTTTCATGGGTTTTatgaagcctctgctgagttgtgtaaactgaaatagacagaagtca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039803153.1 True 1999 mRNA 0.47 1 14989147 14991145

Neighbor

gene id symbol gene type direction distance location
tsc1a tsc1 coding downstream 363950 14600261 ~ 14625197 (-)
ak8 NA coding downstream 390005 14582084 ~ 14599142 (-)
ddx31 ddx31,LOC102778005 coding downstream 408984 14566031 ~ 14580163 (-)
qsox2 qsox2,LOC102781541 coding downstream 441284 14535268 ~ 14547863 (-)
LOC120559985 nacc2,LOC102304562,LOC102778489,LOC103397964,LOC101483941 coding downstream 456388 14515799 ~ 14532759 (-)
LOC120560022 slc18a1,LOC100703472,LOC106527823 coding upstream 54737 15045882 ~ 15064841 (-)
ppiaa LOC107103142,LOC106904245,LOC103470758,LOC106953379,LOC103129635 coding upstream 79122 15070267 ~ 15076395 (-)
LOC120560949 LOC103368073,LOC103397982 coding upstream 87740 15078885 ~ 15104108 (-)
ogdha LOC103368074,LOC101476977,LOC103397981 coding upstream 117871 15109016 ~ 15152609 (-)
adam9 adam9 coding upstream 167236 15158381 ~ 15199350 (-)
LOC120560531 NA non-coding downstream 3962 14983467 ~ 14985185 (-)
G61695 NA non-coding downstream 23362 14965307 ~ 14965785 (-)
G61631 NA non-coding downstream 121490 14802564 ~ 14867657 (-)
G61647 NA non-coding downstream 189998 14798920 ~ 14799149 (-)
G61601 NA non-coding downstream 358174 14629611 ~ 14630973 (-)
G61699 NA non-coding upstream 2332 14993477 ~ 14993780 (-)
G61706 NA non-coding upstream 35374 15026519 ~ 15027395 (-)
G61711 NA non-coding upstream 77397 15068542 ~ 15068893 (-)
G61740 NA non-coding upstream 115120 15106265 ~ 15129963 (-)
G61742 NA non-coding upstream 161849 15152994 ~ 15180419 (-)
trnas-gcu_3 NA other downstream 20570 14968496 ~ 14968577 (-)
trnas-gcu_2 NA other downstream 20987 14968079 ~ 14968160 (-)
trnas-gcu_1 NA other downstream 21387 14967679 ~ 14967760 (-)
trnas-gcu NA other downstream 37564 14951502 ~ 14951583 (-)
trnae-cuc_15 NA other downstream 40317 14948759 ~ 14948830 (-)
LOC120559984 NA other upstream 22388 15013533 ~ 15017816 (-)
tti2 tti2 other upstream 38731 15029876 ~ 15041380 (-)
sdhaf1 sdhaf1,LOC102800057 other upstream 225405 15216550 ~ 15218422 (-)
LOC120560831 NA other upstream 233825 15224970 ~ 15232693 (-)
mfsd14bb LOC103398013,LOC102210719 other upstream 261470 15252615 ~ 15278184 (-)

Expression


Co-expression Network