emb


Basic Information

Item Value
gene id emb
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 28918006 ~ 28927848 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039803185.1
TGAACCCTGTCTGAATAATGGATGGAGTCGGCCACCCACAGGCTGCAGAGTGATATCATGGCTGCGTCACTTGTGCAGCTGAGGAAGGAGGGGTGGGTGGTGGTTTTTAGATGATGCAGCAGGCAGAGGAAGTAGAGAACAAGTAAGAAACAGAGAGAACAGAGGGAAAATAATCATGTCATCTTCCTGGGAGCAGCTCTTTTTTCAGATCCTCCTTCTCGTCTTCTGCAGACACATCAATACaaAGACACCTGGTCCAACGCCCCCGCCACTGGTTTCCATCAGCAGTCCCCTGCCAACAGATGTAAGGAGCGTTGTTCTTAAAgGTGAAAGTCACACAGAGAGTGTTGAACTGTTGAACCCTGTCAATCTGACACTGGAGTGTACCTGGACAGGTAATCAGAACAAACTACCAAACATAACTGGGTTTTGGAGAAAAGATGGGGATGAAGTTGAGAACAGCCGTCTCACAGTGCAGTTGGAGAACGATCAGTATAATCTCAAACGAGCGTTCAGCATCGTCAGTGAAGAAAACCTCGGAAATTACTCATGCATGTTTGAAAGTGAGGCAAAAATAGACTTTGTTTTGGCAGCTCCACACATGCATGAGGTGCGAGATAAACCAATAGTGAGCTATGTGGGGGACTCTGTGGTGATTATATGTAAAATGGAGGAAACCAAACCAAAGCCCATCACCTGGAACTGGTACAAAGCAAATGGTACCGACAAGGAGCAGATATTCACTGCTGCAGAGCCTCTTCGGTATGAAATCAAAAACGATGAGAGGAAGACCAAACTGGTGGTGTACAACCTGACGGAGGCTGACGGAGGCTTGTATTACTGCGGTGCGGTGTACGCCATCAAAACCACGATAGGCCTCGTGGAGCTGAAGGTCATCAACTTTACAGAGCCTCTGAAGCCTTTCCTAGCCATCGTGATCGAGGTTATCGTTCTGGTCGTCGCCATTATGTTCTACGAGAGATATCAGTCTAAGAAAAACTACACAGCAGGAAAAGGGATGAATGaccaaacaaacacactGACACAGGGAGAAAATAATGAACCAGAGGAAGGTTCTTCAATGAGACAGCGGAAAGTTTAAAGACTACAAATTCAACAGATCTTATATTCTTTCAAATCTGTTGTTTGCTTGTTTTAGGATGTGAATTATAGAGCTGTAAAGCAATATCTCAGCAACTATTTGAGTATGTTCACCAAACAATGTGCAATAACCACCATTTAATAATCATTCCTTTAATTCATACACAAGTAGCCTTTTTTAGATTAAAATTTTAACTTTATTACACTGGaagatgtgtttattttttttgtttttattgacaGTGCTGTTGTGACAGCTAAAAGagcaaagcatttttttttctgtttttgcccTATATGCACCCACTTCCTGTGGAAAAACTGCCATGCATTGCATCACTATGCCTTTGAAGCCTCTTTCTCAAAAAGGAAGTGGGTTTAATTCTTTTGAGCAACAACTTAAATCACTTTACTTCTGTTAAGTATGTATTATAGTTTGTGAGCAAACACTTACTATTTATACTGTGCTAGCAattactttttgtcactttctagTTTGTCCTTGCAGTAATGTATGCCTAAAATGCTTTACATTACCATAATAATGTGTATATCAAGATGTAGCATCCTATATGCAGAtgcttgtgtgtttttcattttaatgtatCAGAAGATGGTCAGAAAGGTAGGTAGAAAGGTTCCCCTAATCATGACTTTAACTGTCTTTAGTTGTCAGCCTGCACTTAACCTATAAAGGTGTACCAGGGTATTTGTAAACATGCCAATTCAACTATACAAGTCACTGCCTGGAATAACTATCAAGCCTTTGTGTTAGCGGATATGGAGACAGAGCTTACTTAAAGGGGAACGCCACTGGGTTTTCTGTTTACAGGTCTTATGTGAAAATAATTGTATAAATACTGTTAAAGCTCCAGAGGgacaagggaaaaaaaatatgaagaatAAAAATtgatatctctggttctgctg

Function

NR:

description
embigin

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039803185.1 True 2031 mRNA 0.41 9 28918006 28927848

Neighbor

gene id symbol gene type direction distance location
malt1 LOC102297700,LOC100707481,LOC102194418,LOC101473126,LOC102781556 coding upstream 1396 28902756 ~ 28916610 (+)
LOC120560261 NA coding upstream 27136 28881031 ~ 28890870 (+)
mfsd10 mfsd10 coding upstream 38007 28873642 ~ 28879999 (+)
LOC120560259 NA coding upstream 44657 28860511 ~ 28873349 (+)
zgc:114041 NA coding upstream 105010 28807353 ~ 28812996 (+)
hint2 hint2,LOC102195764,LOC100691034,LOC101473821 coding downstream 7118 28934966 ~ 28938642 (+)
LOC120561296 LOC104963268,LOC101073255 coding downstream 12694 28940542 ~ 28955828 (+)
LOC120560307 LOC103366435,LOC100706955,LOC101475748 coding downstream 35565 28963413 ~ 28979486 (+)
zgc:158260 NA coding downstream 85758 29013606 ~ 29016925 (+)
LOC120560871 ccng2,LOC102294549,LOC100696397,LOC102783398 coding downstream 108167 29036015 ~ 29040829 (+)
G65418 NA non-coding upstream 101606 28816185 ~ 28816400 (+)
G65417 NA non-coding upstream 102530 28815254 ~ 28815476 (+)
G65396 NA non-coding upstream 151781 28766020 ~ 28766225 (+)
G65394 NA non-coding upstream 161813 28755865 ~ 28756193 (+)
G65385 NA non-coding upstream 296707 28621085 ~ 28621299 (+)
G65473 NA non-coding downstream 57765 28985613 ~ 29002180 (+)
LOC120560778 NA non-coding downstream 145093 29072941 ~ 29131216 (+)
G65565 LOC108233773,LOC103375797 non-coding downstream 150578 29078426 ~ 29098313 (+)
G65570 NA non-coding downstream 176140 29103988 ~ 29105609 (+)
G65710 NA non-coding downstream 619601 29547449 ~ 29614880 (+)
mboat4 NA other upstream 68535 28845626 ~ 28849471 (+)
G65084 lipg other upstream 1547047 27205234 ~ 27370959 (+)
ndufs4 ndufs4 other upstream 1878407 27012210 ~ 27039599 (+)
si:dkey-178e17.1 slc25a1,LOC100697273,LOC101470788,LOC103359526,LOC102784907,LOC107394264,LOC103145904 other upstream 2256111 26644661 ~ 26661895 (+)
cltcl1 LOC100691387,LOC103359525 other upstream 2273839 26614237 ~ 26644167 (+)
ubac1 ubac1 other downstream 416732 29344580 ~ 29351756 (+)
fbxo21 fbxo21 other downstream 1259000 30186848 ~ 30212108 (+)
LOC120560820 NA other downstream 1319039 30246887 ~ 30251519 (+)
G65899 taok3 other downstream 1646238 30574086 ~ 30578159 (+)
LOC120561064 NA other downstream 1929732 30857580 ~ 30893280 (+)

Expression


Co-expression Network