LOC120560598


Basic Information

Item Value
gene id LOC120560598
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 25601156 ~ 25622051 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039803262.1
tttctctatcactctgtcCCAACCTACTCTGGATTCATTGGGATTGCTCTAACTACTAAGCACGGGGGCAGGTTTTTTAGTACTGGATTATTGGATATATTTAGCGGATACATTTTTAACAGCACTGAAAAGGATTTCTTGCTACATCAGAGGGCAACCTGTACTGTCTTGCTCTCAGGATGTCTAGAATGGTGTTGCTGTAGTGGAGAGGACCACCACCGTACCATCTGCAGACAGTGACCTGGCCAGTTAAACACCATGCCTCGCTTAAGTGTCAGTCCCAGCTCAAAGCCTAACTGTAGCCCTGTCTGGCTCATCTCTGTTCTCCTGGGCCTCTTGGCTATACACACTAATGCCAAAGATGtCCTTACTGTACCCCAGCAGGTGATCCTGTCAGCCAACATGTATACACAGCATCTAACCATATCCTGGCTGGGGGGAGCAGCCACAACCTTTGACCTCATGATTCTAAGAACTGAACTCAATGAAACTGTCTTCTATGAGACGGTGTCTGTGACGATGAATCAGGTGAGTGGTCGGCACCAGTGGAACTGGACCTCAGTTGAACCTCTCGAGTGTACCTCGCTGTCGATCAAAATCCGCTCACGAGATGGACAGACAACAAGTGAATGGAGCAACACTCAGATACTTCAAGGAAGTGATCTCCCGAGCAATGAGAAATTCCAGATGTACCCCCAGGACAGAATTGTACCTGTGGGGGCCAACACCACCTTCTGTTGCATTGTGGAAGAGGGGTTGCTATTTGGTACCATCCGCTATGGCAACACAGTCATGAACACAACACGGCTAAGTAGGCGAAGTTTTGCCACTACAGTGGTTAATCAGGAACTTTCCGGCGAGACGGGAACCAACGTCGTCTGTTTTGACAACCTGAGGACAAAGCTGACTGGAGCAGTGGTGTTTGTTGGATATCCACCACTGCCCACTGATTTTGTGTGCGAGACTCGTGACTTAACCTCAGCTGTGTGCCAGTGGAAGGAACAACGAGACACGAACTTGTATAGAAAACGAGGAACACGCTACTCGCTGAACAAGAGGAACTGTACTTTGAGCAGCCCAGAGGAGAAGCAGAAAGAGTGTAGCGTGGCCCAGTGGGAGGGTAACTTTACACTGGTAGCTGTAAACCCTCTCGGCCAGTACAGCCTCACTGATTCTGCTGAGATCAATCACAGAGTGCACCCAGTTGCACCAGATAACCTAACCTTTGTTGTCCATGCCTGGAATGCCACTGTGTTGTGGCAATGGGAGTACAAGAGCTATTCCTCTTTGGCTCTTGACTGCCAGGTAGAGCTTGCCTCCCAAGGATACAAAACaaggggtggtgtGATCAATAATGAACTTTTCATGTCATCTTTTTATTGCTCTGTTTCAGTAGAATTGTCACTTAATTGCAATTACAAAACAGCAGcagtagtttttttctttttcattttttctttttcatttgtttttgcttctCTCGTTCCAGATGCTCCTGATGTGTGGATGTGGATGAACAAAGACTACACTGGGCAGGTCATTTGGAAgCCtctgacacaaagacagagcCATGGTCTGATCACAGGTTATGAAGTTACTCTCTGGAGCCCAGAAGTAAATTTCCAGCACACAGAATTGTTTTCACCGGACACTTATGCTGTACCAGTCAACCTCACCCAGATCGCTACCCGTAGCAGTGACAACAAGGTCATGGCAACCGTCATTGCAAAGAATGCTGCTGGGGTGTCTCAACCTGCAAGTGTACTGATACCTTTACGTCTGACAGATGTGGAACCCTTTACTGTGTCCAGGGCAGTTTATACCGACAGAGGTTTCCCTCTGTTCTGGCAGCGCAATCCCAACGACACCTGTGCTTATGTGGTAGAATGGTATGAAGCTTCCTGCAAGTGGGACTGCCCTGTGGAGTGGATCAAGTTGGCCGCTGGAAACACTAATGTCACCATTAAGTCAGCCAACTTGCAGCCGGGTGTGAGGTACAACATTTCCCTGTACAGTAGCTCCTCAGAGGCCCCAGAGCTGCTGCAGCATTGGCAGGGATACATGCAGGAGCTGGTCCCTTCCAGTTCTGTCCTCCTGTCAACCACTCAGCACGACTCTGATATTGTCCTTACCTGGAGAGAGATCCCGCTGGTCAACAGAAGAGGCTTCCTCCTGGGCTACAACATTTACATCAGTGGTGGCTCCCAGCTCACACTTCTAGCCAATCTGTCAGATCTAGAAAGCAGGAGCTACACAGTAAAAGGTCTCTCTCAAGGCCTCTATAACTTTACTGTCAAGGCCTACACCTCAGCAGGCGAGGACAAAGGCACCACTGCTTCCATAACGCTGGAGCCATACACGGATTGGCTGATCCTGGAAATCTTGGCTTCCCTGGGAATCATAGCCTTACTCCTGGCCGTTGTCACCTTCATTTGctacaagaaaagaaaatgGGTGAAAAAGGCGTTCTATCCAGACATACCTGAGCCCAAGCTGTCTGGTGATTGGTCCAGGTCACAGGGGCCGTTGAATGTGAAGCCATCTCCCCACAGTTTGGTCCATATGGTAGAAAAGCCTGAGTGGGATTCTAGTAAAGAAGTGCTCGTTGTCATTCCTGAAGAAGACGAGTTTGAAGGAGACGAGCCAGTTGACACAGATGAGCCAACGTCATTACGCTACTACAACCAAGTGGTAGATGAGCGGCCCATAAGACCACGTTTCCCAGACTCCTCAGATTCGTCTGCATCTTCTTTGGATTCAGCATGCACCGATGTGACGTACACCGGGATCCAGACCTCAGGGTCTTCTTTGGTCTTCCAGCTGGATCCACAGGGCTCTTCTGAGGGCCAACAACCCCAGGctgatctgtctgtctgtggaggaggaggaggaggttacCGGCCCCAGATGCAATCTAGAGCCCCAAGTGATGACATAGGCCTAGCATCACCTGAGCCTTTCCTAGAGCCCCAGGCTGCCAGTGCTGGGGGCTACAAACCCCAGAGCTCCTGGCATTTTGACTCCCCCGTAGATGCTGGGGAAAGTGGGGGGCTGGCACTGTCTCTTGGATCCCCCACCTCAGTTGCTTCCACTCAGTTCCTCCTCCCTGATGGAGAGGAACGTGCAGAGGAGCAACGACAGCCGTCATCATCGGCAGCAACCTGGTTCACCAACCTACTGTCATCCACAAAACCATGatatcatctctctctcactagTAGCAGCCaggccaggggggggggggggtttaacaTAAAACTTTCAGATTCATTACTGTGGCATGACTCAAACAAGCCTATCAGAGGGGTAAATATCCCCTCTGATGTAGCACTACATTCTTACAGCTGTACTTTAACAACAATAATGCTATTTAAGGTGTTATGATGTAGTTAATTTTCTCGGTCATgcaaattataaatataaattggttaaagatgcaccgatagatgtccgcgctattcttgcacatgtagggaacctcgtgaattaacctgcaacatgtcggctgtttggaaattcttcagcgtgtgtgcagaagataacaagtttgcaatatgcaacacctgcaaggaaaaagtagggtgTGGAAGGACTACACTaaaaacccaaatcacatttttttagttggatgtgaaaagaaggaaatggttctaacattgcactttagatgtgtgtgaatttccaacaccaggagtaat

Function

GO: NA

KEGG:

id description
K05058 LIFR, CD118; leukemia inhibitory factor receptor

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039803262.1 True 3698 mRNA 0.48 18 25601156 25622051

Neighbor

gene id symbol gene type direction distance location
cdo1 cdo1,LOC102791980 coding upstream 28049 25567704 ~ 25573107 (+)
sema6a sema6a,LOC102790561 coding upstream 156016 25336024 ~ 25445140 (+)
hsd17b4 hsd17b4 coding upstream 341987 25233215 ~ 25259169 (+)
atxn2 atxn2 coding upstream 461368 25107957 ~ 25139788 (+)
ostf1 ostf1 coding upstream 512510 25080307 ~ 25088646 (+)
spef2 LOC104950669 coding downstream 3953 25626004 ~ 25646477 (+)
LOC120560771 ugt3a2,LOC108233592 coding downstream 25064 25647115 ~ 25653156 (+)
LOC120560772 pdxp,LOC102792570 coding downstream 33634 25655685 ~ 25659461 (+)
LOC120560092 LOC101464110,LOC102227132,LOC106956827,LOC106513657,LOC105931341,LOC103374419,LOC101075487 coding downstream 135037 25757088 ~ 25762906 (+)
LOC120559963 LOC100704176,LOC102304428,LOC102794704,LOC102195896,LOC101487439 coding downstream 152327 25774378 ~ 25784037 (+)
G64495 NA non-coding upstream 45375 25552939 ~ 25555781 (+)
LOC120560635 NA non-coding upstream 48892 25548023 ~ 25552264 (+)
G64489 NA non-coding upstream 94588 25506164 ~ 25506568 (+)
G64450 NA non-coding upstream 298236 25259716 ~ 25302920 (+)
G64392 NA non-coding upstream 390986 25209924 ~ 25210170 (+)
G64578 NA non-coding downstream 40976 25663027 ~ 25663385 (+)
G64592 NA non-coding downstream 75012 25697063 ~ 25699784 (+)
LOC120560927 NA non-coding downstream 91859 25713910 ~ 25747889 (+)
G64607 NA non-coding downstream 166406 25788457 ~ 25795441 (+)
LOC120560032 NA non-coding downstream 217085 25839136 ~ 25843093 (+)
cdc14b cdc14b,LOC102776968,LOC103141798,LOC106948523 other upstream 763708 24823718 ~ 24837448 (+)
prxl2c aaed1 other upstream 778090 24821314 ~ 24823066 (+)
G64108 NA other upstream 1907865 23692662 ~ 23693291 (+)
LOC120560905 clg12h9orf3,LOC103358904,LOC102294417,LOC101470200,LOC102214270 other upstream 2038871 23487967 ~ 23562285 (+)
G63905 NA other upstream 2670951 22929899 ~ 22930205 (+)
LOC120561182 LOC104948667,LOC104930137,LOC103397628,LOC103366370,LOC107092578,LOC102226292,LOC106956829,LOC106919698,LOC103470079,LOC103141747 other downstream 62913 25684964 ~ 25696576 (+)
LOC120560031 LOC104941040,LOC103357154,LOC102795853 other downstream 292228 25914279 ~ 25915577 (+)
LOC120560359 NA other downstream 304036 25926087 ~ 25928596 (+)
nsd3 whsc1l1 other downstream 737069 26359120 ~ 26383843 (+)
G64814 cldn5,LOC103357131 other downstream 790818 26412869 ~ 26414597 (+)

Expression


Co-expression Network