LOC120560602 (LOC108248102,LOC106527805,LOC101064502,LOC101174676)


Basic Information

Item Value
gene id LOC120560602
gene name LOC108248102,LOC106527805,LOC101064502,LOC101174676
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 14626621 ~ 14642212 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039803267.1
ttTGTGTGACTGCCGACAGACAggtgaacagacagacaggtgatgATGCTGTTATTGGTGATTCTGTTCAGCGTCTGTCTGAACTCCGCCTCAGCTGCAAAGctgggtGTGGTGCGGACGGAGGGTGGGAAGGTAGAGGGAAAGAGTCACGGGATGGGGCTGTTTAGGAGCGTAGACGTCTTTAAGGGAGTCCCCTTCGCTGATGTCCCCGGAAAGTGGGAGAAACCAAAACCTCATCCTGGATGGAGCGGAATCCTGAAGGCAAATAAATATCGGGACCGCTGCCTACAGGTGACGCTGCTGCAGACAAAAACCCAGGGCAGTGAAGACTGTCTCTACCTTAATATCTTTGTTCCACAGGGACTAAAGTTGTCGAAGAATCTCCCGGTGATGGTGTACCTGTTCGGCGGAGCGTTCCTGTTGGGGGCATCCAATGACGTGGCGATCCTCGGGGACTCTCTGTACGACGGGAAGGAGATGGCCGACAGGGGCGATGTCATCGTCGTCACGGTGAACTACAGAGTCGGTACGCTGGGTTTCCTCAGCACCGGAGACGCCCGACTGCCAGGTAACTACGGTCTGTGGGATCAGCATGCTGCCATCTCCTGGGTCCGCAGGAACATCGCAGCGTTTGGAGGAAACCCTGACAACATCACCATCTTTGGCCAATCAGCCGGAGCTGTCAGCGCCAGCTTCCAGATGCTGTCTCCCTACAGTAAAGGCTTATTCCGCAGAGTGATCACTCAGTGTGGAGTGGCCCTCAGCCCCTGGGCTCTGCAGAGAAAACCCATGGCTCTCACCAAGAAGATTGCTCGTAAAGTCGGCTGCGGGAGAACCAACGAAGACGACATGTTAGAGTGTCTGAAAATCAGCGACCCCGTTGGTCTCACCTTGGCTGGAAAAATCGACGTGCTGCTGATTCTGGGAAAAGGTACGGTGATGGATCTCCTCGAACTTGCTCCGGTGATCGACGGCGACTTTATCCCCGATGAGCCCAGTCAGCTGTTTCACAACGCGGCTCAGTTTGATTACATGGCCGGAGTCAACAGCATGGATGGACACATCTTTGCTGGAGTCGACGTTCCTTCTATTAACAAGAAAAATGGCAACACCACTATAGCGAACGTTAGAGGTCTGCTGGCCGGTCTGACTAAAGAGAAGGGGAACGCCGCTGTCGACTCGGCCTTCAGTGTTTACTCGTCTCACTGGGGTTCAGCTCCGGAGCCGGCGGTGGTAAAGAAGACAGTGGCCGACATCGAGACTGACTTCCTGTTTCTGGTTCCAACTCAGATCGCCCTCCAGCTCCACGCCAACAACTCCAGTGGAGCCCGTACCTTCTCCTACCTGTTCAACATGAAGACTCGTATCCCAGGATTCCCTCGCTGGGTGGAGGCAGAGCACGCAGAGGACCTGCAGTACCTGTTCGGTAAACCCTTCGCCATCCCGCTGGTCTACTTCCCCCGACACCGGGACCTGTCTGGGTACATGATCGCGTACTGGACCAACTTCGCCAGGACCGGTGATCCCAGTAATGGCGGCAGTAGAGTCCCAGTTCCCTGGCCCCTCTTCACCAAACACCACCATCCCTACCTGATCATCAACCACAAGATGACCAAGTCTTCTGTGAGCTATGACCTGAGATCAGACTACGTCACCTACTGGACCAAAACCTACAGCATCCTGCCGTCATTCAGgagggaaaaagaagaaaatgatgGAGGAATGAAGACAAAGTCTGAGTAAATGAATCTGACTCTGCTGCTGTTATTAATTTTAAACCCTGATCATTTCAAATAGCAGGAAGTGAAGATGTAAACAGGATAATTGACGAATTAGCATCAATCTGAGGTAAACAAATACAACTGTTTGTCTTGCAGTGTGCTGTTTACCATTCATCT
>XM_039803269.1
gacagacaggtgatgATGCTGTTATTGGTGATTCTGTTCAGCGTCTGTCTGAACTCCGCCTCAGCTGCAAAGGGACTAAAGTTGTCGAAGAATCTCCCGGTGATGGTGTACCTGTTCGGCGGAGCGTTCCTGTTGGGGGCATCCAATGACGTGGCGATCCTCGGGGACTCTCTGTACGACGGGAAGGAGATGGCCGACAGGGGCGATGTCATCGTCGTCACGGTGAACTACAGAGTCGGTACGCTGGGTTTCCTCAGCACCGGAGACGCCCGACTGCCAGGTAACTACGGTCTGTGGGATCAGCATGCTGCCATCTCCTGGGTCCGCAGGAACATCGCAGCGTTTGGAGGAAACCCTGACAACATCACCATCTTTGGCCAATCAGCCGGAGCTGTCAGCGCCAGCTTCCAGATGCTGTCTCCCTACAGTAAAGGCTTATTCCGCAGAGTGATCACTCAGTGTGGAGTGGCCCTCAGCCCCTGGGCTCTGCAGAGAAAACCCATGGCTCTCACCAAGAAGATTGCTCGTAAAGTCGGCTGCGGGAGAACCAACGAAGACGACATGTTAGAGTGTCTGAAAATCAGCGACCCCGTTGGTCTCACCTTGGCTGGAAAAATCGACGTGCTGCTGATTCTGGGAAAAGGTACGGTGATGGATCTCCTCGAACTTGCTCCGGTGATCGACGGCGACTTTATCCCCGATGAGCCCAGTCAGCTGTTTCACAACGCGGCTCAGTTTGATTACATGGCCGGAGTCAACAGCATGGATGGACACATCTTTGCTGGAGTCGACGTTCCTTCTATTAACAAGAAAAATGGCAACACCACTATAGCGAACGTTAGAGGTCTGCTGGCCGGTCTGACTAAAGAGAAGGGGAACGCCGCTGTCGACTCGGCCTTCAGTGTTTACTCGTCTCACTGGGGTTCAGCTCCGGAGCCGGCGGTGGTAAAGAAGACAGTGGCCGACATCGAGACTGACTTCCTGTTTCTGGTTCCAACTCAGATCGCCCTCCAGCTCCACGCCAACAACTCCAGTGGAGCCCGTACCTTCTCCTACCTGTTCAACATGAAGACTCGTATCCCAGGATTCCCTCGCTGGGTGGAGGCAGAGCACGCAGAGGACCTGCAGTACCTGTTCGGTAAACCCTTCGCCATCCCGCTGGTCTACTTCCCCCGACACCGGGACCTGTCTGGGTACATGATCGCGTACTGGACCAACTTCGCCAGGACCGGTGATCCCAGTAATGGCGGCAGTAGAGTCCCAGTTCCCTGGCCCCTCTTCACCAAACACCACCATCCCTACCTGATCATCAACCACAAGATGACCAAGTCTTCTGTGAGCTATGACCTGAGATCAGACTACGTCACCTACTGGACCAAAACCTACAGCATCCTGCCGTCATTCAGgagggaaaaagaagaaaatgatgGAGGAATGAAGACAAAGTCTGAGTAAATGAATCTGACTCTGCTGCTGTTATTAATTTTAAACCCTGATCATTTCAAATAGCAGGAAGTGAAGATGTAAACAGGATAATTGACGAATTAGCATCAATCTGAGGTAAACAAATACAACTGTTTGTCTTGCAGTGTGCTGTTTACCATTCATC

Function

NR:

description
PREDICTED: bile salt-activated lipase-like isoform X1

GO: NA

KEGG:

id description
K12298 CEL; bile salt-stimulated lipase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039803267.1 True 1898 mRNA 0.53 12 14626621 14642212
XM_039803269.1 False 1609 mRNA 0.53 11 14626651 14642211

Neighbor

gene id symbol gene type direction distance location
barhl1a NA coding upstream 62922 14556389 ~ 14563699 (+)
cfap77 NA coding upstream 71141 14548679 ~ 14555480 (+)
pla2g1b NA coding upstream 172375 14450851 ~ 14454246 (+)
prkab1b LOC103353610,LOC101165238 coding upstream 181469 14437825 ~ 14445152 (+)
msi1b msi1,LOC100704609 coding upstream 197189 14405140 ~ 14429432 (+)
LOC120561189 LOC102300215,LOC108165969 coding downstream 4515 14646727 ~ 14666265 (+)
grin1b grin1,LOC101175170,LOC102209996,LOC108248095,LOC107386166,LOC101469542,LOC102312845 coding downstream 35459 14677671 ~ 14753400 (+)
kazald3 kazald1,LOC107097908 coding downstream 125504 14767716 ~ 14772152 (+)
LOC120560087 LOC103371518 coding downstream 199859 14842071 ~ 14867655 (+)
prdm12b LOC102306279,LOC102776562,LOC102208027,LOC101478941 coding downstream 236416 14878628 ~ 14886454 (+)
G61468 NA non-coding upstream 127187 14499180 ~ 14499434 (+)
LOC120560938 NA non-coding upstream 127564 14497781 ~ 14499057 (+)
LOC120561032 NA non-coding upstream 154432 14469197 ~ 14472189 (+)
LOC120561034 NA non-coding upstream 160896 14465003 ~ 14465725 (+)
G61450 NA non-coding upstream 222449 14403633 ~ 14404172 (+)
G61513 NA non-coding downstream 33925 14676137 ~ 14677372 (+)
G61539 NA non-coding downstream 384229 15026441 ~ 15027400 (+)
G61540 NA non-coding downstream 385393 15027605 ~ 15027818 (+)
G61730 LOC102301232,LOC102776762,LOC101476977 non-coding downstream 503888 15146100 ~ 15152551 (+)
G61756 NA non-coding downstream 581902 15224114 ~ 15224465 (+)
LOC120560925 NA other upstream 192024 14431330 ~ 14434597 (+)
c6h12orf43 NA other upstream 234038 14389471 ~ 14392583 (+)
G61390 crybb2,LOC108234953,LOC100703162 other upstream 307115 14317539 ~ 14319506 (+)
G61383 NA other upstream 342750 14283417 ~ 14283871 (+)
LOC120560400 tmem150a,LOC106585116 other upstream 344850 14252256 ~ 14281771 (+)
G61514 surf4,LOC103397973,LOC102307728,LOC100699423,LOC101479701,LOC101465012 other downstream 57313 14699525 ~ 14794602 (+)
LOC120561401 NA other downstream 113238 14755450 ~ 14762549 (+)
surf4l surf4,LOC103397973,LOC102307728,LOC100699423,LOC101479701,LOC101465012 other downstream 132301 14774513 ~ 14795943 (+)
cntrl NA other downstream 286161 14928373 ~ 14979797 (+)
G61535 LOC103368073 other downstream 436662 15078874 ~ 15083448 (+)

Expression


Co-expression Network