ppp1cc (ppp1cc)


Basic Information

Item Value
gene id ppp1cc
gene name ppp1cc
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 7924933 ~ 7930884 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039803272.1
CAGCCTCCTTGAAGCAGCTGGCTAGCTGTACAAGGTGCggcagagagaaaaacagagacggGACACCATCgctagctaacagctagctagtgCGGTTgacgtttattttatttttttagtctCTGTTTCTTAGCAAAAAGGCTAACATTTGATGTAGAAATTGTCTAAACTGCGATATCTAAGTAGCTTATTAGATTGCCAAAAGTGTCGACGACCAGCTGAACAGAAGCAGGGTCACACCATCAAcatatttagctagctagctaccgtcaGCCCGGAAAATCAACGAAGCTAACGTTAGGGAGCTAATGCCAGGTTAGCTTAGCGGGCTAGCTTTCACGAGTGTGTTAACGCCAAGACCTTAGATTTGACTGAATCGATTTTATCAACGCCAACGCTGCAATGGCCGATGTTGACAAGCTCAACATAGACAGTATCATCCAACGTCTTTTAGAAGTCAGAGGGGCAAAGCCTGGCAAGAATGTCCAGCTGCAGGAGAATGAGATTCGTGGATTATGCCTGAAGTCCAGGGAGATCTTTCTCAGTCAACCCATTCTTCTGGAACTGGAGGCCCCTCTCAAGATTTGTGGTGATATCCACGGGCAATACTATGACCTGCTGAGGCTGTTTGAGTATGGGGGATTCCCTCCAGAAAGCAACTATCTGTTTCTGGGGGACTATGTGGACAGGGGGAAGCAGTCTTTGGAAACCATCTGCCTTCTGCTGGCCTACAAAATCAAATACCCAGAGAACTTCTTCCTGCTGAGGGGAAACCATGAGTGTGCTTCAATCAACAGAATATATGGTTTCTATGATGAGTGTAAAAGAAGGTACAACATCAAACTCTGGAAGACCTTCACAGATTGTTTTAACTGCCTCCCTATTGCCGCCATCGTTGATGAGAAGATCTTTTGCTGCCACGGagGACTCTCGCCTGACCTTCAGTCCATGGAGCAGATCAGACGCATCATGCGCCCCACTGATGTGCCCGACCAAGGTCTGCTGTGCGATTTGCTCTGGTCTGATCCAGACAAGGATGTTTTGGGCTGGGGGGAGAACGACCGGGGTGTATCATTTACCTTTGGCTCAGAGGTGGTGGCCAAGTTCCTGCACAAGCACGATCTGGATCTGATCTGTCGTGCCCATCAGGTTGTTGAGGATGGCTATGAATTCTTCGCAAAGAGGCAGCTTGTCACTTTGTTCTCAGCGCCCAACTATTGTGGAGAGTTTGACAATGCTGGTGCCATGATGAGTGTGGATGAGACCCTCATGTGCTCTTTCCAGATTTTGAAACCAGCCGAGAAGAAGAAGCCCAACGGCAGCCGTCCCGTGACTCCCCCCCGCAACATGGTCACCAAGCAAGCCAAGAAATGAGTGGGGGGGACACAATTGCTGGAGTCTCATTCCTCTGTTCTGCTTTTCGTTTTTCTGCATTTGAAGGATTGGTTGTCCTTCATGCTGCCAATACTGAAAAGATGTTCACTCCTACCCGATGAAAGCAaactattttgttgttttgttcacAGGGGTAAATCGATATGTCACCATGAAAACCTCAGGTGTTTTGCACTCCATTTTGCAGCTAGTCTTTGCCACATATGACTGTTCAATCAGGAAAAATTTAATAATACGGCTACTTATGCACAGGAATGCCTTTGTTTGAAGCTGTGCACAATTTTTCGAATTCCTTTCATGTCTTATTCATTTGTCTTCTTCTCACGGTAATGTCGGCAATGGGTATTAATGGATATAAAAACCAATGGGgggaaaagtcacaaaaacctGTTTACTTATGtacaattttatttacagtttatttacaGTTGTGTCATTGGATATTGACTTGCACTGCATCATCACATTTTTAAACAGGTCTTGTGCTAAActaaatgaattaataaacacTCTTGTAATGTCTAAATCTTTCTAATAAACTTTGAGTGTATTTTAGGGCGA

Function

symbol description
ppp1cc Acts upstream of or within angiogenesis. Orthologous to human PPP1CC (protein phosphatase 1 catalytic subunit gamma).

NR:

description
PREDICTED: serine/threonine-protein phosphatase PP1-gamma catalytic subunit

GO:

id name namespace
GO:0001525 angiogenesis biological_process
GO:0016311 dephosphorylation biological_process
GO:0004721 phosphoprotein phosphatase activity molecular_function

KEGG:

id description
K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039803272.1 True 1956 mRNA 0.45 7 7924933 7930884

Neighbor

gene id symbol gene type direction distance location
pptc7a pptc7,LOC102794815 coding downstream 367 7914857 ~ 7924566 (-)
si:dkey-91m11.5 bcr,LOC106535678 coding downstream 104461 7766806 ~ 7820472 (-)
adora2aa adora2aa,LOC107667526,LOC107724898,LOC107600048 coding downstream 197873 7710144 ~ 7727060 (-)
LOC120560484 NA coding downstream 218437 7702359 ~ 7706496 (-)
upb1 upb1 coding downstream 251382 7663796 ~ 7673551 (-)
myl2b myl2,LOC101478915,LOC103358995,LOC104927948 coding upstream 2087 7932971 ~ 7939104 (-)
LOC120561008 LOC103358998 coding upstream 158152 8089036 ~ 8161257 (-)
rab35b rab35,LOC103397428 coding upstream 283062 8213946 ~ 8235009 (-)
gcn1 gcn1 coding upstream 304675 8235559 ~ 8272303 (-)
vamp5 LOC104925279 coding upstream 344037 8274921 ~ 8281269 (-)
G59972 NA non-coding downstream 21021 7903693 ~ 7903912 (-)
G59970 NA non-coding downstream 22394 7902231 ~ 7902539 (-)
G59951 NA non-coding downstream 47728 7827141 ~ 7877205 (-)
G59875 NA non-coding downstream 307798 7610429 ~ 7617135 (-)
G59878 NA non-coding downstream 348358 7576229 ~ 7576575 (-)
G60064 NA non-coding upstream 239501 8170385 ~ 8170606 (-)
G60072 NA non-coding upstream 270152 8201036 ~ 8201375 (-)
G60073 NA non-coding upstream 270609 8201493 ~ 8201743 (-)
G60133 NA non-coding upstream 368293 8299177 ~ 8301619 (-)
LOC120560869 NA non-coding upstream 431876 8362760 ~ 8369854 (-)
anapc7 anapc7 other downstream 37508 7877399 ~ 7887425 (-)
specc1la specc1l other downstream 158921 7727560 ~ 7766012 (-)
G59881 NA other downstream 340414 7584086 ~ 7584519 (-)
G59739 LOC102786375,LOC102210956 other downstream 928077 6991203 ~ 6996856 (-)
G59563 NA other downstream 1401259 6522759 ~ 6523674 (-)
G60145 NA other upstream 470138 8401022 ~ 8402566 (-)
tacr1a tacr1,LOC102799894,LOC100703444,LOC102196095 other upstream 712519 8643403 ~ 8727443 (-)
unc5db unc5d other upstream 2191268 10122152 ~ 10518967 (-)
G60715 NA other upstream 3258258 11189142 ~ 11189741 (-)
abca2 abca2 other upstream 3354501 11285385 ~ 11593660 (-)

Expression


Co-expression Network