pptc7a (pptc7,LOC102794815)


Basic Information

Item Value
gene id pptc7a
gene name pptc7,LOC102794815
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 7914857 ~ 7924566 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039803273.1
GTCAGAGCAGTCACAAGACTTTGCTAGCAGAGCGCAGTGTGTGAGGCCACGGGGCAACCGGTTCACACTTTGTGTTATATATCGCTAGTAGTCTCAAAGACAGGACTGACACCATGGCCGCGGAGAACCAGCACTTACGGGTCTTTTGGAGTAGAAGAGGCGACTTTTTTcggtgattttttttctttcttttcttcccagATATCACGGCGCAAGAACAAAGCTCCTCGAGTCTGTACTTACATCATTGCGTATGCGTGCGTGGCGGCTGTTGTCGGCGGCGGCGGCAGTGTCTGGCTAGCTCAGCCTCACATTCACATTAGCAAGTCAACATTGGACATCGCCGCTAAGCTAGCAGGGTTGCTAGCTTGGCCGGTTTGTTTTGGTAGGAGCTGGTGTGTAGGTGATGTTGTCCGTCCTGTCGTACGGTAGACTTGTGGCCAGAGCTGTCATCGGCGGACTTTCTCAGACAGACGGCCGCGACTACAGCCTGGTGACGGCGAGCTGTGGCTTCGGCAAGGACTTTCGCAAAGGCATACTGAAGAAAGGGATGTGCTATGGGGACGACGCGTGCTTCATCGCCCGACACAGATCCGCTGATGTTTTGGGTGTAGCAGATGGAGTAGGTGGCTGGCGAGACTATGGCGTAGACCCATCGCAGTTTTCAGGCACACTGATGAAGACGTGCGAGAGGCTGGTGAAGGAAGGACGCTTCGTCCCCAGCAACCCAGTGGGAGTCCTCACCAGCAGCTACTACGAGCTGCTGCAGAACAAAGTGCCCCTGCTGGGCAGCAGCACGGCCTGCATTGTGATTTTGGACCGGCAGAGTCACCGGCTGCACACAGCCAACCTGGGAGACTCGGGCTTCCTGTTGGTCCGGGGAGGGGAGGTGGTCCACCGCTCGGACGAGCAGCAGCACTACTTCAACACGCCCTTCCAGCTGTCCATCGCCCCCCCGGGGGCCGAAGGAGCCGTCCTCAGTGACAGCCCCGACGCAGCAGACAGCTCTTCGTTCGACGTCCAGCTGGGGGACATCATCCTCACCGCCACCGACGGGCTCTTCGACAACATGCCTGACTACATGATCCTGCAAGAGCTGAAGAAACTCAAGAACACAAACTATGAGAGCATCCAGCAGACCGCCCGCAGCATCGCAGAGCAGGCCCACGTACTGGCGTATGACCCCAACTACATGTCGCCTTTTGCACAGTTTGCTTGTGACAACGGACTGAATGTAAGAGGAGGAAAGCCAGATGACATCACAGTGCTGCTGTCTATAGTTGCCGAATACACCGACTAGAGTCTGTGTGGACGGGGGCATCTGCCTCCTCAGGTGATGGACTGCTTTGATTCCTGCTGGTCAGGATGAAGGACTGATGTCAGATGCTTTACCCGCACGTGTCGACTCTATTCTGCCTCATCCCCCAGCTGACCATCAATCccttctgccccccccccccaaaaaaaaacaactcctaCATGCCCAATTCTCTGTGATTGCTTACAACAGAGAGTGGTAGAATAAAGGGGACTAGAGGCCTGATGAATCCTCTTGGCCGGGCTGCATTGTTGGCATCTCTGCAGCGTTCCAGTGCTCTCTCTGGATAATCCCATTGCCAGGGATAAGCAGTCATCGTGTACGTCGGAGCTGAGGATCGTGGCTGGCGAGGATCAGTCGTCTTTCTCTGTCGGGTGGTTTGGGCAGGGAGGAAGTTGAGATTCAAAAGACCGAGGCAGACGTAGCCAGACGGTACGGGTTGTAGGCTTTTTCAAGCGGCCCCATGCTGGGCAGCTGGAAGGGAAAGATGCAGTCCATCAGTAGTGCTAAGAAGGGAACTGCACAGGAGATGGCGGCACGAGGGCTCAATAAATGGGCTGCTTTGTGCGAGCAAATGATACAGTGGTAGTTAGAAAACCTCAGTCAAAGGGCCCGGAACCTCGTATGTGGGTGCAGGGAGCATATGTTTGAGGACCGGTGTGCTGTTCTGGGATGTTAGGGTTATGTtcaatatttgcaaaaaaaaattagcGTATGTGACATTTATACATCTGTGGTTAGTGTCTTGGCAGGGTGATCCAATAAGATTTGATGAAGAGCAGCAGCTGCCTTTTCCATGCCAGTGTATTTCAAGTCTCGCACACATTTTTGTTGCCTAATGGCGGTTACGATGAGGATTTTATAGTTCAAAAGCCTCGCCAGATATAGGTTGTGTCAAACTCCCTTTAatctcacagctgctgctgcagaagtCTCGATTGTGATTTACATGCGATGTGTCTATggatatgtgtatgtgtgattaaTGCACTTGTGTGCTTGTCAGTGAGACTATTGATAGGTGTAATTTAGTTTGTATGAAATGGACGTGAAGGCTACAAACTTCTCCATTTCCACGGGGCTGCATCGGCGTCGCAGCCTCAAAACGCACAAAGCTTAAGAAGCATATCTGAAAAAGCTCAACACAGAGGAAGTTGGTCAGGTGaccaaatgtatttttgtaactttgttcAGTGGTATTGTTGAATTCTTTAGACTGATCACCACATCAGAGTAGCTTTAGAAACTTAATCAGCATTTccatatctttctctctctctctctctctccctccctctctccccctcctgcTTCAGACCTCCAAGGGCACATTTTTAAGTCGGGTCACTGCTGATTTCATGTGAAAAATTGTCATGTTTCCATTACATCATTACAGATTTGCACTCTGCATCTACCACCTCTTTCACCCACAGTTGAAAATATttcttagtaaaaaaaaaaaatatccatatTTTGTGTAATGTTCTAATGATGTGC

Function

symbol description
pptc7 Enables protein serine/threonine phosphatase activity. Involved in peptidyl-serine dephosphorylation and regulation of ubiquinone biosynthetic process. Located in mitochondrial matrix.

NR:

description
PREDICTED: protein phosphatase PTC7 homolog

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0003824 catalytic activity molecular_function

KEGG:

id description
K17508 PTC7, PPTC7; protein phosphatase PTC7

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039803273.1 True 2815 mRNA 0.51 6 7914857 7924566

Neighbor

gene id symbol gene type direction distance location
si:dkey-91m11.5 bcr,LOC106535678 coding downstream 94385 7766806 ~ 7820472 (-)
adora2aa adora2aa,LOC107667526,LOC107724898,LOC107600048 coding downstream 187797 7710144 ~ 7727060 (-)
LOC120560484 NA coding downstream 208361 7702359 ~ 7706496 (-)
upb1 upb1 coding downstream 241306 7663796 ~ 7673551 (-)
lrp13 NA coding downstream 364656 7528579 ~ 7550201 (-)
ppp1cc ppp1cc coding upstream 367 7924933 ~ 7930884 (-)
myl2b myl2,LOC101478915,LOC103358995,LOC104927948 coding upstream 8405 7932971 ~ 7939104 (-)
LOC120561008 LOC103358998 coding upstream 164470 8089036 ~ 8161257 (-)
rab35b rab35,LOC103397428 coding upstream 289380 8213946 ~ 8235009 (-)
gcn1 gcn1 coding upstream 310993 8235559 ~ 8272303 (-)
G59972 NA non-coding downstream 10945 7903693 ~ 7903912 (-)
G59970 NA non-coding downstream 12318 7902231 ~ 7902539 (-)
G59951 NA non-coding downstream 37652 7827141 ~ 7877205 (-)
G59875 NA non-coding downstream 297722 7610429 ~ 7617135 (-)
G59878 NA non-coding downstream 338282 7576229 ~ 7576575 (-)
G60064 NA non-coding upstream 245819 8170385 ~ 8170606 (-)
G60072 NA non-coding upstream 276470 8201036 ~ 8201375 (-)
G60073 NA non-coding upstream 276927 8201493 ~ 8201743 (-)
G60133 NA non-coding upstream 374611 8299177 ~ 8301619 (-)
LOC120560869 NA non-coding upstream 438194 8362760 ~ 8369854 (-)
anapc7 anapc7 other downstream 27432 7877399 ~ 7887425 (-)
specc1la specc1l other downstream 148845 7727560 ~ 7766012 (-)
G59881 NA other downstream 330338 7584086 ~ 7584519 (-)
G59739 LOC102786375,LOC102210956 other downstream 918001 6991203 ~ 6996856 (-)
G59563 NA other downstream 1391183 6522759 ~ 6523674 (-)
G60145 NA other upstream 476456 8401022 ~ 8402566 (-)
tacr1a tacr1,LOC102799894,LOC100703444,LOC102196095 other upstream 718837 8643403 ~ 8727443 (-)
unc5db unc5d other upstream 2197586 10122152 ~ 10518967 (-)
G60715 NA other upstream 3264576 11189142 ~ 11189741 (-)
abca2 abca2 other upstream 3360819 11285385 ~ 11593660 (-)

Expression


Co-expression Network