rad9b


Basic Information

Item Value
gene id rad9b
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 7904789 ~ 7913520 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039803276.1
TAACATGATTATATTATGACTATtcaataacttttattttgagtTATACTCTTTTTAGTGTGACTATAAATCCTCTGTCGAGCCCTTTTGGCTAACTCTGGCGCATTAACAGAATGTTCATTTAACGTTATGTGCACTGCCACTGTTAAATAAACCATATATAGTAACTAGTATAGTAACTAACTAGGCCATTTTCTTCTAATGATTGAAATTATTTAATCTTACATTTTGCTCCAGAGGACCCTCTTCAAGCCAATTTAGCCTTTATATCGGCATCACTGTacattgtttttctctttttagctAAATTATCATGTAGCTAAAGTTAGCAATTGTAGTGGAGAAATCATCACCGCGCGCGCTGTTTGCTCCAGACTTGGTCACATCGGTCCTCATCAGCAAATATGAACTGTGTTTTGGAAGGAAGTGGTGTAAAAGcattTGGAAAGGCTATTCATGCCCTGTCACggattggagatgaactgtGGTTGGATCCCATGGTTAGAGGGCTGGCACTGAGATCAGTGAATTCTGCTCATTCTGCATATGCCTGCTTCCTCTTCTCGCCGCTGTTCTTCCAGCACTACAGCCTGGGATCAGCATCAGAGCAGAGCAGTGAAACAATCAAATGCAAACTGGCCATGAAGtctattCTACCTATTTTCCGCTGTTTGGCTTCGATTGAGCGTAATGTGGAACGATGTCAAATATCAATCGGCACTCCCGATGACCGAGTGATGATCCAGTTTTTCTGCAGGCATGGCATCACTAAGACCCACAACCTACGTTTTCAGGAAAGTGAGGCTCTGCAGGCAGTGTTTGCCTCGCACCTCTGCCCCAATGTGCTGAAAGCTCCTGCCAGgctTCTAGAGTATATGGTGTATGCTTTTCCAAgttGTGAAGATACTATTTTACTTGGATTTACTTCTGTCACAGATCACATGAAGACTATGTGCACTGAGATGTCCTTACACCCAGACGAGTTTGACTACTTTCAGATCGGAGTAGAGTCGGACATAACTTTCTGTCTGAAGGAGTTGAGGgGTTTACTGTCCTTTGCAGAGTCACATTGCCTTCCTGTGTCCGTCCACTTCGGTGCTGCAGGAAAGCCTGTGTGCTTCTCTGTGGAGGACATGGTCCTGGAGGCTACTGTGGTGCTGGCTACTCTGAGCGACTCTGAAAGCAAGGGCTCCTCTCAGCCTACAGAGACGCTGGCCCCTTCTACCCCCAGgtgTTTAGATACTGCTGTTCTACCTGTGGGTTCATGTGAGGCAGACAGCAGTATGGCTCAGGATAATCCTGCTGTCATGGAGATGATACCATCCAGCCAGGGCAGCCCTATAACCAACCTACCTGCTCttatgctgctgctgcagcctgaGACCGATGACCCTAACAGGCGCGGTGTAGATGATGAGGCCTTTGCCAGTGCCACCTCGACTCCTGCTTCCTCCATGATCTGCTCCCTCCTGTTCAGGGCCTCAGACCAGGACGGTGATGGCTGTGCTGCCAGACTGCCTGTTCTGGCATGCTACAGTGACGAAGAGGAGAATTTGGAGGAAGACTACACAAGAAGCCCTTCCCTCTGAGAACAGGGCTGA

Function

NR:

description
cell cycle checkpoint control protein RAD9B isoform X2

GO:

id name namespace
GO:0000075 cell cycle checkpoint biological_process
GO:0006974 cellular response to DNA damage stimulus biological_process

KEGG:

id description
K10995 RAD9B; cell cycle checkpoint control protein RAD9B

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039803276.1 True 1601 mRNA 0.47 11 7904789 7913520

Neighbor

gene id symbol gene type direction distance location
LOC120560606 NA coding upstream 195 7898563 ~ 7904594 (+)
LOC120560607 LOC106931442,LOC103152401,LOC103469522,LOC102221826,LOC101074150,LOC101161315,LOC105014186,LOC106579958,LOC103397036 coding upstream 4265 7888678 ~ 7900524 (+)
ift81 ift81 coding upstream 58984 7821305 ~ 7845805 (+)
LOC120561497 NA coding upstream 205538 7699133 ~ 7699251 (+)
LOC120561496 NA coding upstream 206744 7697927 ~ 7698045 (+)
mtmr3 mtmr3 coding downstream 141845 8055365 ~ 8078168 (+)
LOC120560501 mtmr3,LOC103152423 coding downstream 164782 8078302 ~ 8083374 (+)
bicdl1 bicdl1 coding downstream 259040 8172560 ~ 8204186 (+)
LOC120560868 NA coding downstream 417865 8331385 ~ 8402569 (+)
LOC120560867 NA coding downstream 474302 8387822 ~ 8389118 (+)
G59839 NA non-coding upstream 257640 7646705 ~ 7647149 (+)
G59837 NA non-coding upstream 268735 7635595 ~ 7636054 (+)
G59826 NA non-coding upstream 273548 7630506 ~ 7631241 (+)
G59833 NA non-coding upstream 316159 7587795 ~ 7588630 (+)
G59804 tia1,LOC104967008 non-coding upstream 400775 7498489 ~ 7504014 (+)
G59931 pptc7,LOC106585473,LOC104951761 non-coding downstream 7257 7920777 ~ 7924556 (+)
G60082 NA non-coding downstream 313372 8226892 ~ 8227173 (+)
G60084 gcn1 non-coding downstream 318484 8232004 ~ 8238788 (+)
G60080 NA non-coding downstream 388738 8302258 ~ 8313113 (+)
G60109 NA non-coding downstream 411533 8325053 ~ 8326953 (+)
atp2a2a atp2a2,LOC102794349,LOC101476777,LOC102310403 other upstream 26418 7847671 ~ 7878371 (+)
zbtb26 LOC104940087,LOC100710858,LOC102306976,LOC102206222,LOC101473380,LOC102792103 other upstream 274609 7625736 ~ 7630180 (+)
susd1 susd1 other upstream 281074 7600092 ~ 7623715 (+)
LOC120560567 ier3ip1,yee9,LOC103361062,LOC100710589,LOC107393509,LOC105014506,LOC103152384 other upstream 328653 7574725 ~ 7576136 (+)
zgc:65851 LOC103361079,LOC101467048,LOC102210174 other upstream 854017 7009646 ~ 7050772 (+)
cux2b cux2,LOC102795992 other downstream 33732 7947252 ~ 8051340 (+)
LOC120560006 NA other downstream 509669 8423189 ~ 8427745 (+)
LOC120560007 NA other downstream 518017 8431537 ~ 8434672 (+)
vps37ba vps37b,vps37c,LOC102776795 other downstream 1077921 8991441 ~ 9014903 (+)
ppp3cca LOC104934810,LOC100705072,LOC105915415,LOC101486266,LOC102777092,LOC103366803,LOC102200614,LOC101072650,LOC106932221 other downstream 1104371 9017891 ~ 9055765 (+)

Expression


Co-expression Network