f2r (f2r,LOC100706519,LOC102798097)


Basic Information

Item Value
gene id f2r
gene name f2r,LOC100706519,LOC102798097
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 17714536 ~ 17718413 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039803294.1
CACACGTCTCTGTAATGGGGAGGAGATGTGCAGTGAGGGGGAGGCGGAGTATATATCCACTCTGCACTGTAATAACGCGTTTGATGCTGCTGGCAGAAAACCCTTCAGTAACAGGCACACCGATAATTTCCACCCACTTGTAGGTGTAAAATATTTGGAGGATATACAGTGAAGCCATGGTTCACCGGTCTATAGGGCTGCTGGTATTGTTTTCTCTACAGAGCTCAGCACTCAACTCCCAAAATGgcTCCGTGCCCTTCCTGCGGACTTTCTCTGCTCACTTTGTAACAGTCACTGATGAGCCTTTCGACTACATTGACCTGCCTGTGTTGGACAGTTTGAGAGATGGCGATGGGTCTGGCTCAGGGTCGGAGCAGGATGCGGTGAAAACACACGGCCCACGCCGCCATCCCCAGAAGCATTATTTTGTCTCCGAGGAAACTAAAGGTTTTCTCCAGGGTCACCTGGCAACAAGCTTTGTCCCGACCGTTTACATGCTCATCTTCATTATCAGTGTGCCCCTCAACCTTGTTGCCGTGGTGATGTTTGTGCATCCCGTCCGTCCCAGAAAACCGGCGGTGATCTACATGCTGAACCTGGCCTGCGCTGACCTGCTGTTTGGCCTCCTCCTTCCCTTCAAGATCGCCTACCATTACAATGGCAACAACTGGATCTATGGCTCCTTCATGTGCAGAGTTGTCACAGCAGCTTTCTACTGCAACATGTATTGCTCTGTCCTGCTCATGACGTGTATCAGCATTGACCGTTTCCTGGCTGTGGTTTACCCCATGAACTCGCTGACGTGGCGCAGCCCTCAGACAGCTACAGCTGTGTGTGCTGCCATGTGGCTGTTGGCCCTCGGAGGAGTATCCCCTCTCCTCATCTCAGGGCAAACCATCTATTTGCCAGACCTGGGCATCACCACCTGCCATGATGTGCAGGATGTGGATAAACTACAAGCCTACTATCTTTACTTCTTCCCCATCTACTCCTCCGTCTTCTTCTTCATCCCTCTTGTCTTCACTGCCGTCTGTTACGTACGTATTATTCAGGCTCTGGCAGCAGCCAACGTGGAGAACCGCTCCAGGAAGACTCGAGCTGTGGTGATGGCTGTGATCGTGCTGGTGGTGTTTGTGGTCTGCTTCACCCCCACCAACATCATCCTGATGGTTCACTATGTTCAGCTGTCTCACAAGTCCAGTGACAGTTCCTACCAGGCGTACCTGCTCTCCATGTGTGTTGGCAGCCTCAGCGCCTGTCTGGATCCAGTCCTCTATTACTTTGCCTCCTCTCAGTGCCAGAAACAGGTGGCGGCACTGCTCAGATGTAAGCGCCTGGCACAAGCAGACAGCAGCTCAGCAACACAGAGTACAAGAACCAGTGGGCGGAGAGACAGCGGCAGGTCATGCAAGATGGAGAGCATTCAAACTGGCCTGGGGAGCCATTACAGCAGGCTGGTGGCTTAACTACATGGACATGAGGAGCCTGCTTCTGAGACACAATTCAAACTTGCACACACAGTATCATTTAAATCCTTACTAAAGAAATGCTCTGGTTGGATCAAAAGAGTGTGTGTCCAGGTAGTGCTGGACTTATCCACCAGTGTGGGATTGTGTGACATGTTTGATTCATTTAGTTGGATAGCATAGCACAAACTTTTCTGCCATTCTTTTCagatttttgtttctgtttttcaagGAATCGTAGGAGTTAAACAGCTAGCATATAACAATGATATAGTTTTAATCTGAAAAATATTACATGTGATGTAGTAACTGCATTATTGTAAGACAAAAACCTTCGGTTTTGACATCTTTTTCTTAATGCAATTCAGTATATCACcatctgttttaaaaaaaaaaagtaaaatcatGAATCACTTATGCACTGGCATTCATAGCGTACAGTAAATAattcaatcaaaacaaaactacTACATTACACATATTGcttaatacaaatgttgctgtatctctttttttattttttattgctgctcactctgtgctCTCTTTGTCGTCGGGGCAGAGCTCTGAAACACAGGAGAACATAACAAAAGACAAACTGTAAGAGAAGAGAGCAAATATTCCCTTGTTGGCAGCATTTCCATTTCCTGACCATGTGCATTGTACTTGAAGTTTGCTgtataaaaacaatgtaatcagaAGGTCATACATTATGCATTTCACAGCACAACATCTCCACCTTGTGGTAACTTGTGTAAGTTGCTGTGTCCAATAAAGAACTAGACCGACA
>XM_039803295.1
GTACACACGTCTCTGTAATGGGGAGGAGATGTGCAGTGAGGGGGAGGCGGAGTATATATCCACTCTGCACTGTAATAACGCGTTTGATGCTGCTGGCAGAAAACCCTTCAGTAACAGGCACACCGATAATTTCCACCCACTTGTAGGTGTAAAATATTTGGAGGATATACAGTGAAGCCATGGTTCACCGGTCTATAGGGCTGCTGGTATTGTTTTCTCTACAGAGCTCAGCACTCAACTCCCAAAATGTCACTGATGAGCCTTTCGACTACATTGACCTGCCTGTGTTGGACAGTTTGAGAGATGGCGATGGGTCTGGCTCAGGGTCGGAGCAGGATGCGGTGAAAACACACGGCCCACGCCGCCATCCCCAGAAGCATTATTTTGTCTCCGAGGAAACTAAAGGTTTTCTCCAGGGTCACCTGGCAACAAGCTTTGTCCCGACCGTTTACATGCTCATCTTCATTATCAGTGTGCCCCTCAACCTTGTTGCCGTGGTGATGTTTGTGCATCCCGTCCGTCCCAGAAAACCGGCGGTGATCTACATGCTGAACCTGGCCTGCGCTGACCTGCTGTTTGGCCTCCTCCTTCCCTTCAAGATCGCCTACCATTACAATGGCAACAACTGGATCTATGGCTCCTTCATGTGCAGAGTTGTCACAGCAGCTTTCTACTGCAACATGTATTGCTCTGTCCTGCTCATGACGTGTATCAGCATTGACCGTTTCCTGGCTGTGGTTTACCCCATGAACTCGCTGACGTGGCGCAGCCCTCAGACAGCTACAGCTGTGTGTGCTGCCATGTGGCTGTTGGCCCTCGGAGGAGTATCCCCTCTCCTCATCTCAGGGCAAACCATCTATTTGCCAGACCTGGGCATCACCACCTGCCATGATGTGCAGGATGTGGATAAACTACAAGCCTACTATCTTTACTTCTTCCCCATCTACTCCTCCGTCTTCTTCTTCATCCCTCTTGTCTTCACTGCCGTCTGTTACGTACGTATTATTCAGGCTCTGGCAGCAGCCAACGTGGAGAACCGCTCCAGGAAGACTCGAGCTGTGGTGATGGCTGTGATCGTGCTGGTGGTGTTTGTGGTCTGCTTCACCCCCACCAACATCATCCTGATGGTTCACTATGTTCAGCTGTCTCACAAGTCCAGTGACAGTTCCTACCAGGCGTACCTGCTCTCCATGTGTGTTGGCAGCCTCAGCGCCTGTCTGGATCCAGTCCTCTATTACTTTGCCTCCTCTCAGTGCCAGAAACAGGTGGCGGCACTGCTCAGATGTAAGCGCCTGGCACAAGCAGACAGCAGCTCAGCAACACAGAGTACAAGAACCAGTGGGCGGAGAGACAGCGGCAGGTCATGCAAGATGGAGAGCATTCAAACTGGCCTGGGGAGCCATTACAGCAGGCTGGTGGCTTAACTACATGGACATGAGGAGCCTGCTTCTGAGACACAATTCAAACTTGCACACACAGTATCATTTAAATCCTTACTAAAGAAATGCTCTGGTTGGATCAAAAGAGTGTGTGTCCAGGTAGTGCTGGACTTATCCACCAGTGTGGGATTGTGTGACATGTTTGATTCATTTAGTTGGATAGCATAGCACAAACTTTTCTGCCATTCTTTTCagatttttgtttctgtttttcaagGAATCGTAGGAGTTAAACAGCTAGCATATAACAATGATATAGTTTTAATCTGAAAAATATTACATGTGATGTAGTAACTGCATTATTGTAAGACAAAAACCTTCGGTTTTGACATCTTTTTCTTAATGCAATTCAGTATATCACcatctgttttaaaaaaaaaaagtaaaatcatGAATCACTTATGCACTGGCATTCATAGCGTACAGTAAATAattcaatcaaaacaaaactacTACATTACACATATTGcttaatacaaatgttgctgtatctctttttttattttttattgctgctcactctgtgctCTCTTTGTCGTCGGGGCAGAGCTCTGAAACACAGGAGAACATAACAAAAGACAAACTGTAAGAGAAGAGAGCAAATATTCCCTTGTTGGCAGCATTTCCATTTCCTGACCATGTGCATTGTACTTGAAGTTTGCTgtataaaaacaatgtaatcagaAGGTCATACATTATGCATTTCACAGCACAACATCTCCACCTTGTGGTAACTTGTGTAAGTTGCTGTGTCCAATAAAGAACTAGACCGACA

Function

symbol description
f2r Enables thrombin-activated receptor activity. Acts upstream of or within circulatory system development; endothelial to hematopoietic transition; and negative regulation of hematopoietic stem cell differentiation. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be integral component of plasma membrane. Is expressed in several structures, including cardiovascular system; digestive system; hematopoietic system; mesoderm; and pleuroperitoneal region. Orthologous to human F2R (coagulation factor II thrombin receptor).

NR:

description
proteinase-activated receptor 1-like

GO:

id name namespace
GO:0070493 thrombin-activated receptor signaling pathway biological_process
GO:0007596 blood coagulation biological_process
GO:0016021 integral component of membrane cellular_component
GO:0015057 thrombin-activated receptor activity molecular_function

KEGG:

id description
K03914 F2R, PAR1; coagulation factor II (thrombin) receptor

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039803294.1 True 2256 mRNA 0.47 2 17714536 17718410
XM_039803295.1 False 2214 mRNA 0.46 2 17714536 17718413

Neighbor

gene id symbol gene type direction distance location
LOC120561237 NA coding downstream 95677 17615141 ~ 17618859 (-)
LOC120560528 vcan,LOC102793126 coding downstream 179368 17482640 ~ 17535168 (-)
LOC120560423 rasa1 coding downstream 658854 17022538 ~ 17055682 (-)
LOC120561320 NA coding downstream 1165969 16547281 ~ 16548567 (-)
nol6 nol6 coding downstream 1168064 16531652 ~ 16546472 (-)
iqgap2 iqgap2 coding upstream 215 17718628 ~ 17755600 (-)
sv2ca sv2c,LOC103357064 coding upstream 40828 17759241 ~ 17792494 (-)
ankdd1b ankdd1b,LOC104956917 coding upstream 91636 17810049 ~ 17815272 (-)
polk LOC102794864,LOC106580482,LOC107579148 coding upstream 97419 17815832 ~ 17824743 (-)
unc45b NA coding upstream 182060 17900473 ~ 17909716 (-)
G62231 NA non-coding downstream 137984 17576219 ~ 17576552 (-)
G62230 NA non-coding downstream 138587 17575641 ~ 17575949 (-)
G62205 NA non-coding downstream 299190 17414652 ~ 17415346 (-)
G62183 NA non-coding downstream 648080 17065836 ~ 17066456 (-)
G62131 mef2c non-coding downstream 828587 16882821 ~ 16885949 (-)
G62318 NA non-coding upstream 123306 17841719 ~ 17842452 (-)
LOC120560086 NA non-coding upstream 178378 17896791 ~ 17899827 (-)
G62333 kif2a non-coding upstream 196513 17914926 ~ 17926955 (-)
G62339 NA non-coding upstream 213329 17931742 ~ 17933468 (-)
G62399 NA non-coding upstream 336838 18055251 ~ 18056143 (-)
LOC120561236 LOC102290490,LOC106517513 other downstream 109416 17598088 ~ 17605120 (-)
LOC120560614 NA other downstream 146522 17534483 ~ 17568014 (-)
G62209 hapln1,LOC103373858,LOC106939955 other downstream 233722 17478306 ~ 17480814 (-)
G62194 NA other downstream 590059 17123996 ~ 17124477 (-)
LOC120560425 NA other downstream 628715 17083479 ~ 17085821 (-)
pip5k1bb pip5k1b,LOC104956915 other upstream 134993 17853406 ~ 17895897 (-)
LOC120560503 vcp,LOC102783844,LOC103357444,LOC107393925,LOC107552546 other upstream 568876 18287289 ~ 18296704 (-)
fancg fancg other upstream 579180 18297593 ~ 18303862 (-)
G62580 tacc1,LOC101470878,LOC102206806 other upstream 659189 18377602 ~ 18380502 (-)
G62582 LOC106098714,LOC103357453,LOC102788116 other upstream 664592 18383005 ~ 18386269 (-)

Expression


Co-expression Network