LOC120560627


Basic Information

Item Value
gene id LOC120560627
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 35607468 ~ 35611982 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039803308.1
GTTCACTTTATTTAACAGCTGGTACTTAATTTAAGACACGCTTTGTCTGGCAAGAACTGCATGTAGTATTGACTGTTCTGAATGGTCTGGACTGATGTGAAGGACCAAAAACCATGATTCAACTGCAATAAAAGATGCAACTTCAGGCACCAACTTCAGCTACTAAAGTGGAGTTTCCCTAACACAAAATGGTGTTCGCATCCAAACTCAGGATTGCAATCTTTGGAAAAAGCAAGAATGAAGAGACGACACTAACTAACATACTCACAGGAAAACAAGATTGTTCTAATACAAAAATGACAATGATTTTCAAGAATTGATTGAGAAAATGGAGAACATAGTGGGTGAAAACAGGGGACAATATTTGACTTTCACTGAAGAGACTGAGACCATGGTTGAACCTGATTGGGAAAATCCATCTTTTACAAGACGTGGATCAGAAGCTTATGAATATAATAGTAGAGAGCCTCCCAGGATAGTGCCGAGAAGAACGTCTGCTAGTTTCGTGCAGAGTAGAGAGTGTCTCAGGATGGTGCTGATTGGAAAGACTGGTTGTGGAAAGAGTGCCACTGGAAACACCATTTTGGGCaaagaatgctttaattctAAAATTTGTCAAATATCAGTGACCAAGCTTTGCCAGAAAGAAACAGGAGAGATTGATGGGCGACGTGTCGTCATAGTAGACACCCCTGGGTTGTACGACACAACTCTGACTAACGAAGAAGTTCAACAGGAGCTTGTGAAATGTGTCAGCTTGTTGGCTCCAGGACCTCATGTGTTCTTACTGGTGCTGCCGATCGGTCGCTTTAcaaaggaggaagaagaaactGTGGAGCTGATCAGGGACTTTTTTGGCAGGAAGTCAGAAGACTTCATCATTGTCGTATTCACCAGAGGAGATGATCTTGAAGACCAAACGATTGAGAGTTACATAGAAGAAGACACTGAGGGATCCTTAAAAAAACTGATAACTGAATGTGGAGGAAGACACCATGTCTTCAATAACAATGATCAGGAGAATCATTCTCAAGTTAGCCAGTTGCTGATCAAGGTTGAGGCAATGGTGAAGGAAAACGGCGGTGGCTACTACACCTCAGATTGGTTCCAAGAAACTGAAGCAGccatacaaaaagaaaaagagttcaTGATGGTGAAGGAACAAGAGATACAGAGGAAACAGAGGGACCTCGAAAGAAACAATCAAGAAGAAATGCAAGAGATAGAAAGAAAATTGGCAGAGCTAAGATCTAAACTTGAtcaagaaagagaagagagaaccaaagaaaaggaggaaaacatcaaGAAGATAGAGGAATTCCAACGACAAGAGTGGAAAGAGAAACTTAAAACTCTGGAGGAAAAACTACAATATGTATCTGCACAAAGTGCTTTCTGGGTGTTATTAATACAGGCTAGAGAAGATATGAGAAAAGAACGAGAGACTtgggagaaggaaagaaaggaatGGTGGGACAAACAATACCAAGAAGATCAACAGAAACGAGAGGAGGAGCAAAAACGACTTGAAAAGTTCAGACAAGAGCAAGaatttaaaaggtttgaaaacaAAAGAACAGAAGATGATTCAATCAGAAGAGAATATGAAGAAAGAGAATGTAAAGAACTACAAGAACTCTATCTATCTAAGAAGAAATTAGaggaaatgaagaaaaatgAAGAGGAGGCCAAAAAGCAAGCTATTGAAATCAGCGAGATATATACAGAGGTTCTTTCAGCTGAGATAGAAAAGAATGAAAAGGAAATGGAGGATTCTAAGCAGACGGAACAAAATCAAAATGCCTCAGTGATAAAACAGTTGTGCAGACACAAAGTATACCAGAAAGACTTTAAgaaattgaagaaaaaacaagaacaagaaaTGAATGAGCTGAAATTGACACTTGACAACAAAAAAGAATATTTGAACGAAGAAATCGATGAGCTGGAGAAAAAACATAAAGAGGAAATACATAGCTGGATACAGGAACATGTGAAGAAAGTCAGCGAAAACAAGGCTTGCCACATTTTATGAGATGTTTTTTCAACACCCGCACAGTTTCAGCTGAAAAACTGTGagcttttgtttaaaaacttaaaatataaagggattattttttcatgttaaactggTGTAGCCTATAATGCTGGCCTATGTCTGGTTGTTTAGATATTATACCTTTATTTAACTTATGTCTgacaaaaaatgtaacaatataaTACATTATGTTTTATAGTTGTAAGTGCAAATGTCTGTGAACAGATAACAATTTTAGTGGCCAGTGCACTGTAGCACATCATTTGTTAACGTATTACCTTTAAGAGCTGattaaattttaattttaattttatacttTTGATTGATCCCCAGTGGTGAAATTACAATGTATGCATGTTCAATAGCTGTAAAGTTCATTGTATCTGTGTAACAGACTGGATGTTAGTAAACATGTCTTATCAGCTGCAGCCTGTATTGTCATTTAATATGACTTTGTCTTTTTGCAAGTCAAAAAAATGAGACAATACAGTGAATGTTAAGTAAGTTAGTGAAACCTAATACACATAATGCATAAAAGATAatgtatctgtttttgttttacaaggAAACTTTTATATTTACATGTACATAATTGTAGTCATAAAATGTTACTAAATAGTCCTAGCCCACACTGAAAATATATTGCATTCTTCTGTTCAGTTGTGTTATAATTAAAAAAGGTTAATACTGCATTTGTCACCACATTAGGAAAGTTAAGATGGCTTAATTCATTCAGTGAGTCATTCAGAATATTTCTCCTCTGCACAAACTGCAAATATGTTCTCTTATTTCTTGTAAACAcatgttttaaaaacaattcACTATTTTACAAATGGATATAGATGAATGAAGTGGTTGAATCTTTAcccttttttccttttacaGCTGATATATGAAAAATGATAAGCATGTCCTACTGTGACAATGTTGGGAGCCTACGATCCATTGGCCTTTAAACAATGGTCTACAATGTGTTGTTCTGATTTtgctagaaaaaaaataagcgCAGCAGACTTTGCATGGTTGTAGCATCAACCTTATAAATTGAGATTTTTACACTGCATTGTACTTTGACATTAAAGATCCGTCAGTAACAAGA
>XM_039803309.1
GCAAGAACTGCATGTAGTAAGTATATCCAACagataataaatGTATTGACTGTTCTGAATGGTCTGGACTGATGTGAAGGACCAAAAACCATGATTCAACTGCAATAAAAGATGCAACTTCAGGCACCAACTTCAGCTACTAAAGTGGAGTTTCCCTAACACAAAATGGTGTTCGCATCCAAACTCAGGATTGCAATCTTTGGAAAAAGCAAGAATGAAGAGACGACACTAACTAACATACTCACAGGAAAACAAGATTGTTCTAATACAAAAATGACAATGATTTTCAAGAATTGATTGAGAAAATGGAGAACATAGTGGGTGAAAACAGGGGACAATATTTGACTTTCACTGAAGAGACTGAGACCATGGTTGAACCTGATTGGGAAAATCCATCTTTTACAAGACGTGGATCAGAAGCTTATGAATATAATAGTAGAGAGCCTCCCAGGATAGTGCCGAGAAGAACGTCTGCTAGTTTCGTGCAGAGTAGAGAGTGTCTCAGGATGGTGCTGATTGGAAAGACTGGTTGTGGAAAGAGTGCCACTGGAAACACCATTTTGGGCaaagaatgctttaattctAAAATTTGTCAAATATCAGTGACCAAGCTTTGCCAGAAAGAAACAGGAGAGATTGATGGGCGACGTGTCGTCATAGTAGACACCCCTGGGTTGTACGACACAACTCTGACTAACGAAGAAGTTCAACAGGAGCTTGTGAAATGTGTCAGCTTGTTGGCTCCAGGACCTCATGTGTTCTTACTGGTGCTGCCGATCGGTCGCTTTAcaaaggaggaagaagaaactGTGGAGCTGATCAGGGACTTTTTTGGCAGGAAGTCAGAAGACTTCATCATTGTCGTATTCACCAGAGGAGATGATCTTGAAGACCAAACGATTGAGAGTTACATAGAAGAAGACACTGAGGGATCCTTAAAAAAACTGATAACTGAATGTGGAGGAAGACACCATGTCTTCAATAACAATGATCAGGAGAATCATTCTCAAGTTAGCCAGTTGCTGATCAAGGTTGAGGCAATGGTGAAGGAAAACGGCGGTGGCTACTACACCTCAGATTGGTTCCAAGAAACTGAAGCAGccatacaaaaagaaaaagagttcaTGATGGTGAAGGAACAAGAGATACAGAGGAAACAGAGGGACCTCGAAAGAAACAATCAAGAAGAAATGCAAGAGATAGAAAGAAAATTGGCAGAGCTAAGATCTAAACTTGAtcaagaaagagaagagagaaccaaagaaaaggaggaaaacatcaaGAAGATAGAGGAATTCCAACGACAAGAGTGGAAAGAGAAACTTAAAACTCTGGAGGAAAAACTACAATATGTATCTGCACAAAGTGCTTTCTGGGTGTTATTAATACAGGCTAGAGAAGATATGAGAAAAGAACGAGAGACTtgggagaaggaaagaaaggaatGGTGGGACAAACAATACCAAGAAGATCAACAGAAACGAGAGGAGGAGCAAAAACGACTTGAAAAGTTCAGACAAGAGCAAGaatttaaaaggtttgaaaacaAAAGAACAGAAGATGATTCAATCAGAAGAGAATATGAAGAAAGAGAATGTAAAGAACTACAAGAACTCTATCTATCTAAGAAGAAATTAGaggaaatgaagaaaaatgAAGAGGAGGCCAAAAAGCAAGCTATTGAAATCAGCGAGATATATACAGAGGTTCTTTCAGCTGAGATAGAAAAGAATGAAAAGGAAATGGAGGATTCTAAGCAGACGGAACAAAATCAAAATGCCTCAGTGATAAAACAGTTGTGCAGACACAAAGTATACCAGAAAGACTTTAAgaaattgaagaaaaaacaagaacaagaaaTGAATGAGCTGAAATTGACACTTGACAACAAAAAAGAATATTTGAACGAAGAAATCGATGAGCTGGAGAAAAAACATAAAGAGGAAATACATAGCTGGATACAGGAACATGTGAAGAAAGTCAGCGAAAACAAGGCTTGCCACATTTTATGAGATGTTTTTTCAACACCCGCACAGTTTCAGCTGAAAAACTGTGagcttttgtttaaaaacttaaaatataaagggattattttttcatgttaaactggTGTAGCCTATAATGCTGGCCTATGTCTGGTTGTTTAGATATTATACCTTTATTTAACTTATGTCTgacaaaaaatgtaacaatataaTACATTATGTTTTATAGTTGTAAGTGCAAATGTCTGTGAACAGATAACAATTTTAGTGGCCAGTGCACTGTAGCACATCATTTGTTAACGTATTACCTTTAAGAGCTGattaaattttaattttaattttatacttTTGATTGATCCCCAGTGGTGAAATTACAATGTATGCATGTTCAATAGCTGTAAAGTTCATTGTATCTGTGTAACAGACTGGATGTTAGTAAACATGTCTTATCAGCTGCAGCCTGTATTGTCATTTAATATGACTTTGTCTTTTTGCAAGTCAAAAAAATGAGACAATACAGTGAATGTTAAGTAAGTTAGTGAAACCTAATACACATAATGCATAAAAGATAatgtatctgtttttgttttacaaggAAACTTTTATATTTACATGTACATAATTGTAGTCATAAAATGTTACTAAATAGTCCTAGCCCACACTGAAAATATATTGCATTCTTCTGTTCAGTTGTGTTATAATTAAAAAAGGTTAATACTGCATTTGTCACCACATTAGGAAAGTTAAGATGGCTTAATTCATTCAGTGAGTCATTCAGAATATTTCTCCTCTGCACAAACTGCAAATATGTTCTCTTATTTCTTGTAAACAcatgttttaaaaacaattcACTATTTTACAAATGGATATAGATGAATGAAGTGGTTGAATCTTTAcccttttttccttttacaGCTGATATATGAAAAATGATAAGCATGTCCTACTGTGACAATGTTGGGAGCCTACGATCCATTGGCCTTTAAACAATGGTCTACAATGTGTTGTTCTGATTTtgctagaaaaaaaataagcgCAGCAGACTTTGCATGGTTGTAGCATCAACCTTATAAATTGAGATTTTTACACTGCATTGTACTTTGACATTAAAGATCCGTCAGTAACAAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039803308.1 True 3137 mRNA 0.36 4 35607468 35611982
XM_039803309.1 False 3114 mRNA 0.36 4 35607517 35611982

Neighbor

gene id symbol gene type direction distance location
LOC120560628 NA coding upstream 4131 35596806 ~ 35603337 (+)
znf608 znf608,LOC102795784 coding upstream 85356 35463291 ~ 35522112 (+)
LOC120560914 NA coding upstream 212969 35380725 ~ 35394499 (+)
LOC120561082 NA coding upstream 397753 35200417 ~ 35209715 (+)
LOC120560891 LOC104934778,LOC100695474,LOC103374565,LOC101464334,LOC102198690 coding upstream 425472 35161583 ~ 35181996 (+)
LOC120560626 NA coding downstream 1868 35613850 ~ 35619866 (+)
LOC120561433 ppic coding downstream 63389 35675371 ~ 35683544 (+)
rnf214 LOC104937101,LOC104945828,LOC102078715,LOC101469573,LOC102289946,LOC102794451,LOC102193077,LOC104967173 coding downstream 177109 35789091 ~ 35796234 (+)
LOC120561090 NA coding downstream 415328 36027310 ~ 36035340 (+)
trnai-aau_2 NA coding downstream 549416 36161398 ~ 36161471 (+)
G66997 NA non-coding upstream 189661 35388776 ~ 35417807 (+)
LOC120561203 NA non-coding upstream 349396 35255661 ~ 35258072 (+)
G66907 NA non-coding upstream 605272 35000278 ~ 35002196 (+)
G66834 NA non-coding upstream 777814 34828892 ~ 34829654 (+)
G66830 NA non-coding upstream 791141 34815589 ~ 34816327 (+)
LOC120560688 NA non-coding downstream 283169 35895151 ~ 35898183 (+)
G67202 NA non-coding downstream 443702 36055684 ~ 36059486 (+)
G67216 NA non-coding downstream 482833 36094815 ~ 36096123 (+)
G67219 NA non-coding downstream 508913 36120895 ~ 36128995 (+)
G67263 NA non-coding downstream 645724 36257706 ~ 36257913 (+)
LOC120560625 cep120 other upstream 58237 35522665 ~ 35549231 (+)
LOC120561428 fam163b,LOC103374717,LOC102797860,LOC101061299,LOC102298266,LOC101485828,LOC104964271,LOC102215914 other upstream 547837 35046844 ~ 35059631 (+)
G66832 NA other upstream 742778 34861499 ~ 34864690 (+)
LOC120561070 NA other upstream 833662 34765930 ~ 34773806 (+)
cfap157 NA other upstream 1080063 34514010 ~ 34527405 (+)
G67146 NA other downstream 228892 35840874 ~ 35852056 (+)
G67145 NA other downstream 229552 35841534 ~ 35854161 (+)
G67152 NA other downstream 259441 35871423 ~ 36023264 (+)
trpm3 trpm3,LOC103470491,LOC103145554,LOC106928040,LOC101476865,LOC100708457 other downstream 629597 36241579 ~ 36492695 (+)
LOC120560081 NA other downstream 865816 36477798 ~ 36481311 (+)

Expression


Co-expression Network