LOC120560628


Basic Information

Item Value
gene id LOC120560628
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 35596806 ~ 35603337 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039803310.1
ataataaatgtaattaataacCAAACAGATTCATTAATCAAAACAAGTTTATTGATCATTCTCTGGTGTTGACTGTCCTGAATGGTCTGGCCTGATCTGTCGGACCAAAAATATGATTCAACTGCAATAAAAGATACAACTTCAGGTACCAAGTTTAACTACTGAGGTGGAATTTACCTAACACAAAATGGCATCCGCATCTGAACTCAGGATTGTGATATTTGGAAAAAGCCAGAATGAAAAGACGACACTAACTAACTTACTGACTGGAAAACAAGATTGTTCTCATCCAAGAACGCGTGCACAATTTGcacatttgcacacaaaacCCTTCACAGTAGTGAAAACACCAGACGTCTTCAGTCTGCCTGTGCAAAGAGTGAAACACGAGATGAAGAAGTGTGTGGCTGAATGTCCTCCTGGACCAAATGTTCTGCTGCTGTTAGTGAAGCATTCTAATTTCAAtgaagaggacagaaaaaaaattaagtcaaTCATAAACTTCTTTGGACAAGATGCTTTTAAATCCTCAATGGTCATCATACCAAAAAATGATTGGGTTGGGAATTCCACAGTTTATCAACTCATCCAAGATTGCAGACAAAGACAGCATAGAATGAACTTTGATGAACACGATTTTCCAGACAATGATTTTCAAGAGTTGATTGAGAAAATGGAGAAGATAGTGGATGAAAACAGGGGACAATATTTGACCTTCACCGAAGAGACTGTTTGCCAGGGTAgacctgaatgtgcaaaacctACTCTTACAAGACGTGGATCAGAAGCTTATCAATATCAAGGAAAAGGATTTCACAGAATGGTGCCGGGTACAGCATCTCTCAGGATCCCTCCCAGGATAGTGCCAAGAAAAAAGTCTCCCAGGATAGTCCCGAAAAGAGAGTTTCCCAGTACGGTGACAAGTAGAGAGTGTCTCAGGATGGTGCTGATTGGAAAGACTGGTTGTGGAAAGAGTGCCACTGGAAACACCATTTTGGGCAAAGAATGCTTCAAATCGAAATCCAGCCCAAAGTCAGTGACCGAGTTTTGCGGGACAGAAACAGGGGAGATTGATGGGCGACGTGTCGTCATAATAGACACCCCTGGCTTGTTCGACACAACTCTGACCAATGATAAAGTTCAACAGGAGCTTGTGAAATGTGTCAGCTTGTTGGCTCCAGGACCTCATGTGTTCTTACTGGTGCTGCCGATCGGTCGCTTTAcaaaggaggaagaagaaactGTGGAGCTGATCAGGGACTTTTTTGGCAAGAAGTCAGAAGACTTCATCATTGTCGTATTCACCAGAGGAGATGATCTTGAAGACCAAACGATTGAGAGTTACATAGAAGAAGACACTGAGGGATCCTTAAAAAATCTGATAACTGAATGTGGAGGAAGATACCATGTCTTCAATAACAATGATCAGGAGAATCATTCTCAAGTTAGCCAGCTGCTGATCAAGGTTGAGACAATGGTGAAGAAAAACGGCGGTGGCTACTACACCTCAGATTGGTTTCAAGGAGCTGAGGCAGccatacaaaaagaaaaagagatcaTGATGTTGAAGGAACTAGAGATACAGAGGAAACAGAGGGACCTTGAAAGAAAACATCAAGAAGAAATGCGAGCGAAGGAAAGAGAATTGGCAGAGCTaagatcaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaagaaaaaaaaaaaaaaaaaataaacttgatcaagaaaaaaaaaaaaaaaaccaaaaagaaaaaaaaaaaaaaaaaggaaaaaaagaaaaaaaaagagaaaagagggggAAAAGAAGAGAACAGAGATGAAAGAAACTAAGAAACGCAAGCTAGAGAAGACATAAAAAAAGAGGCTTGGGAGCAGGAAAGAAAGGAATGGTGGAACATACGATATCAAGAAGAGCAACAGGAACGAGAGGAGGAGCAAAGACGACTTGAAAAGCTCAGACAGGAGCAGGAATTTGAAAGatatgaaaacaaaagaaaagaaaaagaagagaggatCAAAAGAGAATATGAGGAAGAAGAACTCTATCAGGACATTGATGAAATAAGGAGGAAACACGAAGAGGAGGTCAGAAAGCAAGCTGAACAATGCCACGAATTCAGACACAAGTATACACAGGAAGTTTTAGCTGAGATGGAAAAGTGTGGAAAGGAGATGGAGGATCTGAAGCAGAGGCAACAAAACCAAAATGCCTCAATGATAAAACAGTTGTGCAGACACAAAGTATACCAGAAAGACTTTAAGAAATTGAAGAAAAACCAAGAACAAGAAATGAATGAGCTGAAATTGAAACTTTTAAACCTTGAGAAACAGAATCAGAGCAATGAAATCCATGAGCTAGAGAAAATACATGAGGAGGAAATACATAGGTGGATACAGGAACATGTGAAGAAAGCCAGCGAAAACAAGGCTTGTCACATTTTAtgagatgttttgtttttttctcacagCGGCACAGTTTCAGctgaaaaactgagcttttgtTTGAAGACTAAATATTTTGTGAGATTTTTGTCATGTTGACTGGTGTATATAGTTAGCGTATATAAAGTTGTTCAGGTACCATTAGTATTAGTACTTATTATAATACATGGACATCCCCTTTGTTTTGGAAGTGTGCTTCTTCTGGTCATGCACTTTGTAGCACAACTGCTCTCCATGTCACTTGACAATTTAGCATCAAAAACCTGATCCTGCTAAAACATTAGATGTTCAAAGGTTTTAGGCAGGATTGTTTTATTTCCACATTTAAGGCAAACCCCACCACAGTTGACACTAGATCTAATGATCTATTTACAACTAGCTTTAACAGAGACTAAAATGTTCAAGTCATGAGCATTTAAGCTTTTGTTTGAAGACTAAATATTTTGTGAGATTTTTGTCATGTTGACTGGTGTATATAGTTAGCGTATATAAAGTTGTTCAGGTACCATTAGTATATTTAATATTCAATGTCTGACATTAAAATAACAATATGATAAATTACGTTGTATAGTTGTAAGTGCAAATGTCTGTAAACAGATAACAATTATAGTAGCCAATGCACTGTAGCACATCATTTGTTTAACTTCTGTTAACTTTAAGAGCTGATTAAGTTTAAATGTATGCATGTTCAATAGCTGTAAAGTTCAGTGTATCTGTAGCCTGTACTGTCATTTAATATGACTTTGTCTTTTTGCACAAGTTAACAATTAACAATTAAACTATTTTGCATTAAGACAGGTAAGAGATATTACAGCAAATGTTAAGAGTAAACTAGTGAAACCTGACAAATAAATGGATGCGGAAAAAATAATTAcatatctgtttttgttttacaaggAATGTCTATTTCAAAAAGTGTTTATAAgagatgaatacatttttttatatggatgca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039803310.1 True 3398 mRNA 0.37 4 35596806 35603337

Neighbor

gene id symbol gene type direction distance location
znf608 znf608,LOC102795784 coding upstream 74694 35463291 ~ 35522112 (+)
LOC120560914 NA coding upstream 202307 35380725 ~ 35394499 (+)
LOC120561082 NA coding upstream 387091 35200417 ~ 35209715 (+)
LOC120560891 LOC104934778,LOC100695474,LOC103374565,LOC101464334,LOC102198690 coding upstream 414810 35161583 ~ 35181996 (+)
slc2a8 slc2a8,slc2a6 coding upstream 436152 35145750 ~ 35160654 (+)
LOC120560627 NA coding downstream 4131 35607468 ~ 35611982 (+)
LOC120560626 NA coding downstream 10513 35613850 ~ 35619866 (+)
LOC120561433 ppic coding downstream 72034 35675371 ~ 35683544 (+)
rnf214 LOC104937101,LOC104945828,LOC102078715,LOC101469573,LOC102289946,LOC102794451,LOC102193077,LOC104967173 coding downstream 185754 35789091 ~ 35796234 (+)
LOC120561090 NA coding downstream 423973 36027310 ~ 36035340 (+)
G66997 NA non-coding upstream 178999 35388776 ~ 35417807 (+)
LOC120561203 NA non-coding upstream 338734 35255661 ~ 35258072 (+)
G66907 NA non-coding upstream 594610 35000278 ~ 35002196 (+)
G66834 NA non-coding upstream 767152 34828892 ~ 34829654 (+)
G66830 NA non-coding upstream 780479 34815589 ~ 34816327 (+)
LOC120560688 NA non-coding downstream 291814 35895151 ~ 35898183 (+)
G67202 NA non-coding downstream 452347 36055684 ~ 36059486 (+)
G67216 NA non-coding downstream 491478 36094815 ~ 36096123 (+)
G67219 NA non-coding downstream 517558 36120895 ~ 36128995 (+)
G67263 NA non-coding downstream 654369 36257706 ~ 36257913 (+)
LOC120560625 cep120 other upstream 47575 35522665 ~ 35549231 (+)
LOC120561428 fam163b,LOC103374717,LOC102797860,LOC101061299,LOC102298266,LOC101485828,LOC104964271,LOC102215914 other upstream 537175 35046844 ~ 35059631 (+)
G66832 NA other upstream 732116 34861499 ~ 34864690 (+)
LOC120561070 NA other upstream 823000 34765930 ~ 34773806 (+)
cfap157 NA other upstream 1069401 34514010 ~ 34527405 (+)
G67146 NA other downstream 237537 35840874 ~ 35852056 (+)
G67145 NA other downstream 238197 35841534 ~ 35854161 (+)
G67152 NA other downstream 268086 35871423 ~ 36023264 (+)
trpm3 trpm3,LOC103470491,LOC103145554,LOC106928040,LOC101476865,LOC100708457 other downstream 638242 36241579 ~ 36492695 (+)
LOC120560081 NA other downstream 874461 36477798 ~ 36481311 (+)

Expression


Co-expression Network