adamts12 (adamts12)


Basic Information

Item Value
gene id adamts12
gene name adamts12
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 26924528 ~ 26945467 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039803319.1
GCTCCCAGTCTTCCCTCGTTGCATGCTTGCCTTCGTGAAAGGAGATTAGTGAGCGTGTTCATGTCATGACACAGTGCAGCTCAGGATCGAAGTGGTCGCCTCTAACTGAAACCCCAATGTCCAGGACTCTTTTGCAGTGGTTTGTGTTTGGTTACATGAAATATGCGATGTTCGCAGGAATGCCCGGTTCTTTTTCTGCTAcactttgttttcattttggcaGCCGGCCACAAAGAGCTCTCCGACTCTGGCAGACTATTCTCCCTCATTGCAGAACAAGGTCAGTTGTCCCAGTCAGATCTGTCCACTGTCCACCCAGTGAAAACCAGCGCTGATGGAGAGTTTATCTCCCACTCTCTGGCTCACCACTTCAAGGGTGGGCGAGTCACGCGTGACCTACATCCCCTTGGTTTGGATGGACAGGTTTATTACAAGGTCAACTACAAGGGTCgcactttaatgtttaatttgacTGCAAACAATCACTTGGTTTCAAGTGACTACATCCTAGAGAGGAGGAACGGCAGTGCCAACAGGACTGAGCATCGTCGCTCTGAGGGGAACTCCTGTCACCTCCTTGGCACTGTGGAAGCCTCTGATGTGCGAGGAACTGCTGCCATCAGCTCTTGTAAAGGACTGaGAGGCTTCTTTTCCCTGCCAGAGGGACACTACTTTATCGAACCTTTCCAGAAATCTCCTGATAATCCTGTAGGGACTCCAGAGCCCCATATTGTCTATCCAGGAGTTACAACAGAAAGCCAGAGAAAAAAACGCAGTTTTGAGTCCAAAGATACACCCAGCCCCTGTGGAGTTCAAGATGCTCCAAGTGACTCTGTccaggtggagagagagagggaggaatgggagagggagcagcagagggGGGAGGATCAGGCTCAGTCCCGCTCGCAGCGCTCAGTCAGCAGAGAGCGGTGGGTCGAGACCATGGTGGTAGCTGACGCCAAACTCATAGAATACCACGGCACTGATAATGTGGAGTCCTACATCTTCACCATCATGAACATGGTGGCAGGGATCTTTCATGATGCCAGTATTGGGAATGCCATCCATGTAATCTTGGTTCGCCTCATTCTACTCCATGGAGAAGAGAAAGAGTTGAAGATTGTTCACCATGCAGACGCCACTTTGTCCAGTTTCTGTGCTTGGCAGAAAAACCTCAATCCCCAGAGTGACACACATCCAGCTCATCATGATGTGGCTGTGTTGGTCACTAGGAAAGACATCTGTGCTGGAATGAACCAGCCCTGTGAGACCCTGGGTCTGTCTCATCTGTCTGGGATGTGTCAACCGCACCGCAGCTGCAACATCAATGAGGATTCAGGACTACCTGTTGCCTTCACCATCGCTCATGAAATGGGCcacagCTTTGGAATTCATCATGACGGTCAGGGGAATGACTGTGAGCTGGAAGGGCGGCACCCGTTCATCATGTCCAGACAGCTGATGTACGACAGCTCGCCCCTCACTTGGTCCTCCTGCTCCAAAGAATATATCACACGCTTCCTCGATCGAGGCTGGGGTTTCTGTCTTGATGACCGCCCTTCCAAGAGGGACCTAACCACCCCGCTGGCTCGCCTCGGTGTCCGTTACACCACACACCACCAGTGCCAGCTCCAGTATGGCCCAAATGCTACCTTCTGCCATGAGGTTGATAACGTTTGCCAGATTCTTTGGTGTTCAGTGAACGGCTCCTGTCGCTCCAAACTGGACTCGCCTATAGATGGCACTCGCTGTGGACCAGAGAAGTGGTGTATCTCAGGAGAGTGTGTGATTGTGGGTAAACTGCCAGAGACGGTGAACGGAGGCTGGGGACAGTGGAGTACCTGGTCTCACTGCTCCAGGACCTGTGGAACTGGAGTTCAGTCAGCAGAGAGGGAATGTAACAACCCCAAACCAGAGTTCGGGGGCAAGTACTGCACTGGGGAAAGGAAGCGTTATCGGACCTGTAATACCAAACCCTGTCAGAAGAATAAACCAACCTTTCGAGAGATGCTGTGCAGTGAGTTTGACACTGTGTCCTACCACAATGAGCTCTACCAGTGGATTCCTGTGTCTAACCAAATAAACCCCTGTGAGCTGCACTGTCGACCAGTCGTTGAGTATTTTTCGGAGAAGATGCTCGACGCCGTGACAGACGGGACACCGTGCTTCATGAACAACATGTCCAGAAACATCTGCGTCAACGGAGTGTGCAAGGCGGTCGGCTGTGACTATGGCATTGACTCAAACGCTGTGGAGGATCGTTGTGGAGTCTGTCTGGGTGATGGCACAAGCTGTGAGACAGTCTATAAGTCTTTTGATGAAGGAGATGGCTTTGGGTACGTGGACGTGGGTGTGATACCTGAGGGCGCGCGGGACATCCTGGTAAAGGAAGTGGAGGAGGCAGGTAACTTCCTGGCTCTAAAGAGCGAGACGTCGGAGGAGTACTTCCTCAACGGCAACTTCATCATCCAGTGGAACGGGGAGTACGAGGCCGGTGGGACAACGTTCTACTACGAACGCAGTGGGAACATGGAGAACCTCACCGCTCCTGGACCCACCAAACAGCCAGTCATGCTGCAGTTACTATTTCAGGAGAAGAACCTAGGTATTAAGTATGAGTACACCATCAAGAAGACCAAAGAGACAGGAAATGAGGTCAGTGAACCCATTTACAGTTGGAGGCATGGGGCATGGACAGACTGCAGCACCACCTGTGGCTTAGGGGAGCAGTACCAGCCTGTGCGGTGTTTTGAAATGGACGTGGGTGTAGTGGATGAGTCTTTGTGTGACCCAGACAGCCGCCCAGAAGGGAGATACCGAAAATGCAAGAATATGGATTGTCCTGCAAGGTGGTGGGTGGGCGGCTGGCAGCAGTGTTCAGCCACCTGTGGATTAGAAGGGGCACGCAAGCGAACAGTTCTCTGTGTTCGGACAGTTTCAGGGGAGGAAAGGGTGCTCCACCCTGCTGAATGCAAGCATCTGCTTAAACCCAAACCTGTGGTACCATGCAACAGAGATGTACCATGTGGACAGGACTGGGCTGTTGGCGATTGGGAAGAGTGCCCAGTTACATGTGGAGGAGGTGTTCGCTCACGTACAGTCACATGTGCACTTACACCCAAGACTTGCGACCTCTCAACCAAACCTCGGTCAAGATCACTGTGTGCCCTTCAGAGCTGCCCTAAGTCAAGTCTTCGTAGACGACCTGGGCCTCCTCCTAAGTACCGCAGCATCTACCCACCTAACAGCCACCCCATCAAGCATCCTACACCTACACCTTACTGGGCTCCCACGAGCACCACAGCCACAGCTGCACCCACAGCTGCTATCACTGTGAGAAAGAAAACAACCACCAAAGAAACTACAACTGCTTTCATCCCAACCACCACTTCCCTTTTAACCCCTCAAACCACAATCCCTGAAATCATAGTCACAGATGATTTAGAGTTCAATGTTAGAGTGAGGAAAAATGAGGATAAGAGAGGAAAGGTTTTCCCATCTAAAGCAAATTCTGCTGAAAAGGACATCAATTCAACTGGCGTGGAAAAGgtagaagagagggaggagggagaggagggaagtACACCAAATGTGGTGATGTACACTCCAGGATATGATTATGTTGTTAAGGATAGGAAAACAGAGGATGAGGGGATTATTGACCTGGATGTTACAACATCTGCATCCCTCAAAAATCCTCTTAAATTAACCACACTAACACCACATATACTCATTACACCCACTTTACAAACAAGTCCACCTACAATGCACACAACCAGCACCCACCGCCAAGCACCCACGGCCACCCACTCCACCCTACACACCAGTACTAAAACATGGGCAAAGACCAATCACCActatcccttctccaaccctcACACCACCCCTCGTATCAATCCATACAGGCCCTGGACACACAGGGTTCCCCTTACCACTCCCATGTACCACGCGGTCCCATCGAAAGCTGGCTTCCACACAACACAAGCTCCTCCCACAACTGCAAGACATCCATTCACCACTGCAGCATCATCCCAGTCCACAGTGAAGATCATTAAACTAAAGAAGCCTGCGGTGACACCCAAAAAAAACAGTTCTGTCTCTCGTGCTAAAAAGCCCTCTTCCTGGTCCAAAGGCAGTCGCTCCAACAATCAAAACCAGCAACAAGAACATCCCATTAGCAGCTCCGTCAGTGACCAGAGCAACCTGAAGGCCAGAGAGCCAGTCAGCAAGGAAATATTCTGGGTTGTAGGAAACTGGAGCGAGTGTTCAACAACATGTGGGATTGGAGCAATATGGAGGATGGTAGAGTGCAGCTCCCAGAATGATGAGGACTGTGCCAAAATGAAGAGACCTGAGCCTGCACGCACATGTCACATGCAGCCCTGTGCCACCTGGCACAGTGGCAGCTGGAGCAAGTGTCCAGATTACTGTGCAGGGGTGGGAAGGAGGTACCGTGATGTCCAGTGTGTCGATTCTCAGAGTAAACGTCCCCTCAGACCTTTCCATTGTCAAGCTGTGTCCAGCAGACCCCTCAGCACCTTGACATGCCCCCAAAAGCCCTGTATGAACTGGAGTATATCACCCTGGGGACCGTGCTCTGGCAGCTGTGGTGAAGGCGTCAGGGAGAGGCTGGTGTACTGTCCAGAGCCTCATCGCTGTAGCGCCACACTGAGGCCAAACAGCACAGAGTCGTGCAGTCTAAAGCCCTGCACTCGCTGGAAAGCCAAGGACTGGGATGAGTGCCGTGTGAGTTGTGGTGGGGGTCAGCAGCAGCGTGAAGTCAACTGTGTGAGTGAGCAGGATTTGGCCGTGATGCCAAACAGCCTCTGTGAGAATATTTCCAAACCAGAAACACTCAGGAAGTGCAATATGCAGGAATGCAAGTCCAACACAGGTCCAGTTTGCAGAAAAAACACCATGTCTTCTTTCTTCTGTGACAAGCTGAAGCTGTTGGGTCGCTGCTCTCTCAGGTCTGTCCAAAGACAGTGTTGTGTCACCTGTGGGTCATAGCTAGGGTTATACACCCACTTAAATTACAATGGACACATCCCAACTACAGTAATACATACTGTATCCTCTTGCAATACTGACAGAAGCCATGCTATCCACAGATTGACACGTCCAAACCAAAGTGCGTATGACCATAACCAGCACATATTAATCAGCACAACCAAACCTGGGTCGAataagattatatatatatatatatatattttttttttctttttaagtctAACTTTTTCAAATGAAAATTTAGctagaaatcttttttttttaaatgagcgAGAGAACAGCCTAAACACTGATGATGAATACACATGTGGACTGTTACAAATGTTAGAGCTTAATGTTCATGGAGCCATGTTAAGGTGGGAAGAAATGCTTATCAGAATTAAAATAtttcttttgttaaaaaaatttgaGAATTTATTAACAGGCAAGTTTAATGATGTTGAAGGACAGCATGCAAAATCTGGCATATATAAAAGTATAGTGAAATtactaatttaaaaaataatttaagatAATAAGAAACACAATTCAAAAGTTACAAAAGCTCAAGCCAGTACAAGAGTGACTCCAGTTGTGATACATTAATTAATAACACaagcatacagtacagtgtgcACCTTCTTTATTAGTAAACAAATTAATGTATGACCTGCAGTACAGTACATATCTTTCTGGTCCAAAGATGCTTTTATAATCATGGTGCTGATGATTTACAGCTCAACAGTCAAGTTACCAGTTATAGTTTTATATCAAAGTGAACTGGTAAAAAACAGAATgtaaataaagatttttttgagACTTCCATTAAATTGTTAATAgttttaataatctgtttttttaactcctatattttgctttgttttgcttCAATTGTGGTTTTGTCCTCAGAGCTGGCactgtgtgtttacattttccTTGGTACAAGTTCCTGCtttagacatttttgttttgattgtcaATAATAATTAAATTGGCTGCAGAACGTGTACAGTTCTGTAGTCGAACCTGTGGTGCTCCTCCTCTGGTGTGAGATTGATCAATGAGAAAGAGGTGTTGCAGGTCATCCCTCTCAGGTCCCTCTAAAGATGGCCGCTGTGTTTGTATGATGTTGTACAGGGCAGGCATTACCATTGTACATGCAAATGGTATATCACCTTGACTGATTTGTACTTCACATGTCTCCATCAGTAATGTGACGATAAAAGATGTTCTTGATAAAACTGCTTGGTAACTTAGacgtgaaataaaaaaaatcttaagtatctttaa

Function

symbol description
adamts12 Predicted to enable metal ion binding activity and metalloendopeptidase activity. Predicted to act upstream of or within proteolysis. Predicted to be located in extracellular region. Is expressed in several structures, including digestive system; eye; heart; pleuroperitoneal region; and thymus. Orthologous to human ADAMTS12 (ADAM metallopeptidase with thrombospondin type 1 motif 12).

NR:

description
PREDICTED: A disintegrin and metalloproteinase with thrombospondin motifs 12

GO:

id name namespace
GO:0006508 proteolysis biological_process
GO:0004222 metalloendopeptidase activity molecular_function
GO:0008270 zinc ion binding molecular_function

KEGG:

id description
K08626 ADAMTS12; a disintegrin and metalloproteinase with thrombospondin motifs 12

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039803319.1 True 6285 mRNA 0.48 24 26924528 26945467

Neighbor

gene id symbol gene type direction distance location
myl7 myl7,LOC101480470 coding upstream 14100 26908203 ~ 26910428 (+)
gck gck coding upstream 17009 26901799 ~ 26907519 (+)
osmr NA coding upstream 36702 26877033 ~ 26887826 (+)
LOC120560731 arhgef28,LOC104956788,LOC103359538 coding upstream 47577 26837272 ~ 26876951 (+)
utp15 utp15 coding upstream 87356 26830051 ~ 26837172 (+)
fgf10b fgf10,LOC104956796 coding downstream 6753 26952220 ~ 26961992 (+)
paip1 paip1,LOC104941454 coding downstream 20017 26965484 ~ 26974939 (+)
itga2.2 itga2 coding downstream 35878 26981345 ~ 27002644 (+)
fsta fst coding downstream 59672 27005139 ~ 27011321 (+)
snx18a snx18 coding downstream 233893 27179360 ~ 27193519 (+)
LOC120560738 NA non-coding upstream 24970 26897902 ~ 26899558 (+)
G64967 ykt6 non-coding upstream 28385 26893701 ~ 26896143 (+)
G64949 btf3,LOC103470010,LOC107089645,LOC106958054,LOC106926613 non-coding upstream 95343 26761391 ~ 26829185 (+)
G64944 NA non-coding upstream 240273 26682518 ~ 26684255 (+)
G64930 NA non-coding upstream 261002 26662767 ~ 26663526 (+)
G65083 NA non-coding downstream 254482 27199949 ~ 27200190 (+)
G65106 NA non-coding downstream 433531 27378998 ~ 27379215 (+)
G65108 NA non-coding downstream 443990 27389457 ~ 27389862 (+)
G65171 NA non-coding downstream 531281 27476748 ~ 27476966 (+)
G65272 NA non-coding downstream 957608 27903075 ~ 27904933 (+)
si:dkey-178e17.1 slc25a1,LOC100697273,LOC101470788,LOC103359526,LOC102784907,LOC107394264,LOC103145904 other upstream 262633 26644661 ~ 26661895 (+)
cltcl1 LOC100691387,LOC103359525 other upstream 280361 26614237 ~ 26644167 (+)
c6h22orf39 clg12h22orf39 other upstream 427541 26494284 ~ 26496987 (+)
G64814 cldn5,LOC103357131 other upstream 509931 26412869 ~ 26414597 (+)
nsd3 whsc1l1 other upstream 540685 26359120 ~ 26383843 (+)
ndufs4 ndufs4 other downstream 66743 27012210 ~ 27039599 (+)
G65084 lipg other downstream 259767 27205234 ~ 27370959 (+)
mboat4 NA other downstream 1900159 28845626 ~ 28849471 (+)
ubac1 ubac1 other downstream 2399113 29344580 ~ 29351756 (+)
fbxo21 fbxo21 other downstream 3241381 30186848 ~ 30212108 (+)

Expression


Co-expression Network