LOC120560642 (LOC103357080,LOC100694356,LOC102778564,LOC102192834)


Basic Information

Item Value
gene id LOC120560642
gene name LOC103357080,LOC100694356,LOC102778564,LOC102192834
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 17952081 ~ 17967487 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039803325.1
aaaaacaaaaacaaaaaacggtcATACTAAAACTTTGCTGCCGACCTCCATGAAAATTCCGATATTTCTTCCAGCACTTGGAGCCAacgttattatttatttgagtaTGTGGTGGTCTTGCTCGGCAAACGAAGAAGAAAACATGGTGATGTTATGATTTTGGAGACGATGCTAATCTTTCTGGAGACAGTGCGATTGGACACATCCCCTTGTCACCCTTATTCATGGCCTCAGTCTGTTGTATTTGAACGATGTACGCCGCTGTTTTTGGATCCGGATGGTACTTTATGATGAGAAAGGTCTGGAGCCGAGAGATCGAGAATAACGGAACGCAGCTGAGAGGCGGATCGACCGCTTGACCTGGTATAACACACGGTCGCATGTTATGTGTCTGAGTCGAGACCTGTATGGTCCCAAAGCTAATGATAACGGTTGCATGAGGTCGGGATAGGCAGCCAGGCATCCGAGTTGAATGCAGGTGGGCCAGAGATGGGAAATGACACCGCACTGCTCCAAATGTATCCGCTCAAGCGAAGGAGGATATAGCACTTCAGGCGAAATATCCTCGGAGAGAAAACAATGTTTGTTTAACGCTTTTTTTGAACTGTAACTGTAACACtaacactgtaacacacaccgTTTGACTATTCTGTATCCGACTCCCAAACAGTGCCAACGCAGGTTTTATTGGCGCGAGCAGTGTTACTATTTTTGTTCCATCACTTTGCAGACATGTCTTTCACAATGGAGGATAATTTGGAGTCGGGGTGGGTAGCCGTTCGCCCGAATGCGTTTGAAGTGAAGGAAAAGCATAAATTTGTCTTTATCGTTGCCTGGAATGAAGTGGAGGGTAAATTTGCCATTACGTGTCACAACAGGACGGTGCAGAGGAGAAGCTTTGGTAGGGACCCACCGGCGGAGGCGACTGGCAAGGATGGGGACAAAACAAAATGGCCCGAAAGTCCCGTCAGAGTATCCAAGAGCCCTAGCAAAGGAGCCAAGGAAGCTGTGTTTAGAGGCCCTAAGACTAAGTCCGTCATGTCAACAAAACCAAGCCCTGTCAAAATTCCAACTGTGATTACATCTGCAGCATCTCCGGTTAGCCCTGATACTGAGATGCTAAAATCACTAAGAGAGGGGCAACTGTCCCCCTCAATGGACAGCTTGGACCTGGAGGAACTGGACAGTCTGGGCATGAAGGACTGCAGCTGGGCCGGACTCTTCTCCTTCCAGGACCTCCGGTCAATCCACCAGCAGCTGTGCTCGGTGAActcggacctggagccctgccTCCCGGTGTTTCCGGAGGAACCAGCCGGGATGTGGACAGTGCTGTTCGGCCCGACGGAAGTAACCGAGACCGAAATGGATGAGCTTTGCTACAGTTTACAGATGTACCTAGGCCACGCGCTCGATACGTGTGGATGGAAGATCCTTTCGCAGGTTCTGTTTACGGAAAACGACGACCTAGATGAGTACTATGAGAGCCTGAGCGAGCTGAGGCAGTCCGGGTTAGAGGAGGCGCTCAACCGTGCATCAAAACATCTGCAAGAGCTGCTGGAGAAGCACCAGACCATGGACAGTATGGTGAAGCTGTTGGAGCTATatgaggaggaagatgaggcCTATGGAGTCCTGCTGGAGGCCTCCACACGGCTGTACCAGTACCTGCTGCAGCCCTTCAGAGACATGAGGGAACTAGCAATGCTACGCAGACAGCAGATCAAGATTTCTATGGAGAATGACTATTTGGGCCCAAGGCGGATCGAGGCTCTAAAAAAGGAGGACTCTGACTGGCAGAAGAAAGCTCAGGAGGCAGTACTCAACATCCAGGAGTTTACTGTAAAATACTTTGAGATCACTGCTAGAGCCCAGAAAGGGCTCTATGAGCGTATGAAGACGGACCGGCGTAAGTTTGGTAAATCTTCATGGACAGCGGCGGTAGAGCGCATGGAGAGACTCTGCTACTCTGTCGCCAAGGAAACTCTACAGCTCCAGAGAGCCAGGGAGCTCTGTCTGGAGCAGAGGAAACACACACTTCGAGAGGAGATGCAGAGTCTGTGTAGCAGTGACGATGCCATGGCCCTCTTAGACCACATGGAGACACGTTACTATGAGCGCCAGCTCCAACTGTACGATATCCAGGTTGAGATACTACAGTGTGAAGAGCTGCTCCTCACTGCTCAACTAGACAGCATTCACAGACAGATGTCAGagCGTCAGGATGAGGTGGTGTACTATGACACCTTTGAAAGTGCAGATGATATAAAAGGGGATGATACTGCAGAGAGGGAAGAGCTGCGCAGACTTCAGGTCAGCGCTCGACAGCTGGAGGCAAGAAGGGGCCGCATCACTGCCAAGCGTTCCTATCTGAGGAACAAAAGGGAGATCTGTGTATCCAACCACACTCAGAAGCAGCAGGAACGTCAAACCATCCACAAGGACTCTGTATCCCACCAGGTCTTACAGCTGAatgatgaagaagaggaagacGAAGAGAGGAAGAACAGCCGAGTTAGTCAGGAGAGGCAGAGGACTCTGGAGAGACTACGCACTTTCAAGCAGCGCTACCCAGGTCAGGTGATTCTCAAGTCCACTCGACTACGCGTGACCCACACCAGAAGAAGAGAGCGTGGAAGGAGCATGGAAATGAGTAGCGCGACTGTGGGCCACCCGCTGTGTCTCAGTACCAGTGTGCAGACGGACCCCAGCTCCACACTCACCACTCAGCCCGTCACGGTCCTCACAgcatctcttcctcctctgcctgTGCCCAGTACTGCAGACTCCACCTGCTCTCCCTGCTCCCTGTCCTCACTACTGGCATCTCCCAtgtcccctcctcctccacctccccctccccctcccctgcCAATGAAGGAGGAGTTGTCGCCTTCTGGGAGCCCAGGTCGGCATGGGCAGAAGGTTGAAGGGAAGAATGCAGCAGAAGagctctccctctccccacTCGGTCCATTTATCCCTCGCTTCTTTGATAGCAGCCAACTGTTGAGCGCCCGGCAAAAACTGAGGAAGACTCCCCAGGTCGACTCCCACAGCAGAAGAGTGAGCTCGCCCATGGACGAGGTGCTAGCCTCCCTGAAGAGAGGCAGCTTCCACCTGAGGAAGGTCGACCAGCGTTCTCTGCCTCCTTCAACAGGTGACGATGATCCCAACAGCATCCTGGCTCAGATTCGCAAGGGGGTCAAACTGAGGCGTGTCCccaggaaagagagaagggatCAGGGAGAGCTCCCGGCCTCCACCGACCCCCTGACCAGGAGCATCCACGAGGCGCTGCGCCGCATAAAGGATGCCTCACCAGACTCTGACTCAGATGACGACGGGCTGGCCGGCCACGACTGGGAAAGCTAGGGTTCACGGCTCAGACGCAAGAAATAATAACGCACACAGATGCCTGCACCCTCTGGCACTCACTTCACTCACACTCAAGCACACAAAGCCCAGTCACACATGTACCTAGTGACTACGCCAGGGCATGAGTCATACCGAATATCACCAACTCACCAAATGCTCCAAAGGTCTAATGGTTAACctgttcatttgtttttcacaCTACATGCACCATGGTGAAAGGACATTATTTGTAGGTTTTATTCCTGTATCAGATTGTGAGGAtgctttgtttatttattgttttggaGTTGTACTGTTGAAAAGCTCTGCACTGGCCTTTTGTGGCTACAACATCCAGAAGCGCACATAACACATTTTACACCAAAACACTGCACTGACAGTTATTTGCGAAACTGAAACCACTCGCCCCAAAGCATTAGAACGGAGAAACTTTAactgcaacacaaattaagtaATGGGTATGGTTGATCATTTGGTGGCATGTgggagacagaaaaacaaatagaTCACACTGAGATTTGAACTTGGACTTACTCTCCAGATTGGAAACCATAACACCATCCCCTCTGCTGCCGCTCTGTCCTATTTTTACTCAACCAGTGTACTATGACTGAACAACACTACTGTATGCTGCACACCTGGTTTTGTCCTGTCACACGTGGGTGTGTTATTGTCCTACAGTATAAGGATGACTGCTTGTCTAGTCTGACACTGCACAAAGACTGTAAATCCTTTTAGTCTGTCGCACCAGATTCCTTCCCCTCCCCCCCGCTCTTGTCCTCTTCCGACCTTCACTACCCCCAACTCTCACCCCCCTATCTGGGTGAGGGAATATGTATCGACCCATCTGTTCGTCCGCAGCATATGGCCAGGCTGGTGGGAGATATGGAGAGTCACAGTAGGTTTATCATTTGGTGCAGAAACTAACAACATCTCTGAGCAGAAGCTGGTCACCTAGAGTGGGAAAAGGATTAGATGAAGGGTCACCACCAGAGCTGCAGTTTCTTTAGTGGGGAGGAGTTAATATAGTTAGTGTGGTAAAGTGTGGGTAGACTTGGTTGGTGATTCCCAAACTTCGTATGTGGGATAGTCAAGGCAGAGCTGTGAAACCGGTCACGCTTATTTGAATGATGGATGGTTTGTGGGAGGCTAGATTCTCTCAGCGCTGTAGGGAGTCACTGTGGGCTGTGGATTAGGCGGTCGTGATGCATGCAGTTTCTCTCCGCTATTGCATCTCATTTCTTTCACTGCACTCAGTGGGCAGAAGCACACAGTAGGAGGCCTGTTACTCACTGTGCTGGAAGTGAAATCCCGCTCATGCACACATGGACTCTCACGCTCACACTAAACTCACAGACAACGTGTGCAGAAACATTTTAGTGGCAAAGTGAGTCCACAGGCTCAACTcataagtctttttttttttttttttttttaaatggtttcagcAATTTCATAATGCATAGTACAAATTATGAATCACTTTGCACAgtaacaacttttttttcatcactGGTGAAACATATCTGTAGCAGATGAGTAAACAATGTGGAACTGGATCTACAGAGGTGTGATGGAAGGACAGTATGTCAGGACCAGTGGGATGCTTAGCAGCAGAGGAATTCATGCTAACACACGTTAACATGAAGCAAAAGTATGTGAATTCATAAACTAAGCTCTGATTCTGAAACAGCCTCAGCATGCACAAACAGCTTTGATGCAAAGATTTTTGCTTTTCTCTTGTTCTTGTGTTGAGAGCCATTTGCGGATTAATCATAAAGCACGCACTAATGTAGAAAGAATAGGCATGGAAGTATGTGTCAGCTTGAAAATAGCTCAGTGCTGGCAGAGCAAACCTGAGGCACTTTTACATGTCTTCTGTCACTGTCAGCACGATGTTCGTCCATGGTACCCTCATCATGTAGCACAAGGAAGAGATCTAACCCTAACTCTTAACTTAAAATCCTATCCCAGACCTTACCCGACTCTATGTCACTATAACTGACCAGGGCAGAGTTTCCCAAAATATGTTAGCCTACTGCTAAGGTTTACTTTGCTCCACTAAACAATGACTAACAATGTGGTCAAAATGTTTGGGAAACTGGGCTCAGACTGACCTTATAAACACACTGTCATGTGCTTTACACTGTTCTTTATCTATAAATAACCTTTTGGAGCTAACTGTAATTTTACATTGCATTCCATTGCTTTTGTTTTGTATCCCTTTTTTTCCAAAGCATTTCCAGCCAAATCATTTTGTGATGTGTTTGCTTCTGAATATTTCCTATGTAGACCTGTTATCCACGCAGGCTGACTATATGACCCGCTGTCTGAATAAGTCAGTCAGACACTTGAGAAGTGCAATATCAATATAGAGAAATACAAGAAAAGGGATGAAGCAAGTTAAATGGGTAATAATGAGTTCAGATTGATTGCCTAAAACAATGGACTTATTAAATGTTAcagttgtttttacactttagtAGTGTATAAACATACTGTTCCAAGAATacctttttgcctttttgttctaccattttcatttattcaaaccttttttttttttacaacctctCCCCCTGCATTTGAATAAAACCTTGTGAAGCAAA

Function

NR:

description
PREDICTED: junction-mediating and -regulatory protein-like

GO: NA

KEGG:

id description
K24045 JMY; junction-mediating and -regulatory protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039803325.1 True 5987 mRNA 0.48 10 17952081 17967487

Neighbor

gene id symbol gene type direction distance location
LOC120560760 LOC104943387 coding upstream 2024 17945795 ~ 17950057 (+)
kif2a kif2a coding upstream 18653 17914936 ~ 17933428 (+)
LOC120560752 col4a3bp coding upstream 102056 17825047 ~ 17850025 (+)
poc5 LOC104956951 coding upstream 141823 17801445 ~ 17810258 (+)
f2rl2 f2rl2,LOC104963555 coding upstream 216132 17733568 ~ 17735949 (+)
tent2 NA coding downstream 24379 17991866 ~ 17998381 (+)
slc14a2 slc14a1,LOC100693008,LOC103357096 coding downstream 166160 18133647 ~ 18139334 (+)
riok2 riok2 coding downstream 265241 18232728 ~ 18237999 (+)
LOC120560024 lix1 coding downstream 271821 18239308 ~ 18244773 (+)
epg5 epg5 coding downstream 278014 18245501 ~ 18268581 (+)
G62344 NA non-coding upstream 11235 17939027 ~ 17940846 (+)
G62294 NA non-coding upstream 138268 17813589 ~ 17813813 (+)
G62280 NA non-coding upstream 194024 17757855 ~ 17758057 (+)
LOC120560616 NA non-coding upstream 407173 17536842 ~ 17544908 (+)
G62217 NA non-coding upstream 435984 17515654 ~ 17516097 (+)
G62372 NA non-coding downstream 87312 18054799 ~ 18056149 (+)
G62406 NA non-coding downstream 160049 18127536 ~ 18127745 (+)
G62484 vcp,LOC102783844,LOC103357444,LOC107746855,LOC107393925 non-coding downstream 325773 18293260 ~ 18296903 (+)
G62502 thoc5 non-coding downstream 345724 18313211 ~ 18314777 (+)
G62508 NA non-coding downstream 353156 18320643 ~ 18321158 (+)
tmem167a tmem167a,LOC103397084 other upstream 379376 17568013 ~ 17572705 (+)
LOC120560947 edil3 other upstream 537486 17285648 ~ 17414595 (+)
LOC120560897 LOC105925468 other upstream 1417906 16532916 ~ 16534175 (+)
LOC120560890 NA other upstream 1476176 16468310 ~ 16475905 (+)
fam172a fam172a,LOC102785942 other upstream 1852597 15943698 ~ 16099484 (+)
cmya5 cmya5,LOC106958347,LOC104953151 other downstream 31199 17998686 ~ 18011030 (+)
thbs4a thbs4,LOC104953147,LOC106958346 other downstream 47918 18015405 ~ 18029386 (+)
setbp1 setbp1,LOC102781608 other downstream 107281 18074768 ~ 18129069 (+)
G62513 NA other downstream 363218 18330705 ~ 18331230 (+)
tbx5b tbx5,LOC103470367 other downstream 439861 18407348 ~ 18419590 (+)

Expression


Co-expression Network