atp6v0a2b (atp6v0a2)


Basic Information

Item Value
gene id atp6v0a2b
gene name atp6v0a2
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 19256786 ~ 19269028 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039803344.1
AGTTGACGGTATTCAACAGTGTGGAGTGACGTGGAGTACTATGGACATGGCCAGCGGACGTCTGCTAAAAACTTCGCAAACTATGAGAAGAGCCGTGACTGCATCTTTGGATATGTAACGTCAGCGGTCTTTATACCGGGTTGCCTCACAATTTCAGATTCAACTTTGACCAAACTAGTTTTTCATCCAAGAATTAACAACACAGCGCGCCGGGCTAGctcattaacgttagctaacgttaacaggAACAGCCTCTGTTGTAGCGATAGCTATCTAAAGTTAGCGTCATGCAAATCAAATAACGCTATTGTATTATCACCGTAGCCAAAACATGAAAAACTTGACTAATCGCAGTGCTATAGTGCTATAGTTCACAGAAACCTCAGTAGTTAGCTTGCTAATACTAGCACGTCGGCTTTACGTTAGCAGGTAAATATCCGAGCGAACTGTCAAAATGTGCTCTCTGCTCCGAGGTGAAGAGATGTGTCTGGCCCAACTGTTTCTGCAGTCTGGGTCAGCATACGACTGCATCAATGAACTTGGAGAACTGGGGCTTGTGGAGTTCAGAGACCTCAATCCCAGTGTTAACGCATTCCAACGAAAACATGTCAATGAGATCAAAAAGTgtgaagagatggagaggaTCCTTGGATACCTTCTGAGAGAGGTCAAGAAAGCAGATATTTCCCTGCCAGAAGGAGACGTTAACCCAGTGGCCCCTCTACCCAAGCACGTCATGGCTATAATGgaACAGCTGCAGAGGCTAGAAGTGGAGTTAGGTGAAGTCACCAGGAATAAAGAGAAGCTGCAGAGGAATCTGCTGGAGCTGACCgagtacacacacatgctgcgcACCACCCGCAACTTTGTTCAGAGAACGTCGGAGCGAGAGCCCCTACAAGTACAGTATGAGGAGTTTCCTTTCCTAGAAAAAGACACAATGATGGACTACAGCAGCATGCAGAGGCTAGGAGCCAAACTGGGTTTCATTTCTGGGCTTATTCAGAGGACGAAGATCGAGGCCTTCGAGCGGATGCTTTGGAGAGTGTGTAAAGGCTACACCATCCTCAGCTACGCTGAGGTCGAGGAGTATTTGGAAGATCCTGACACGGGTGAGCCTACCAAAAGTGTGGTGTTCCTGATCTCTTACTGGGGAGACCAAATTGGTCAGAAAGTGAAGAAGATCTGTGACTGTTACCACTGTCACTTGTATCCCTATCCCAGTAGCAATGAGGAGAGGAATGATGTTGTGGAAGGACTAAGAACTCGCATTCAGGACctgcatacaGTACTTCATAGGACAGATGACTATCTGAAACAGGTCTTGATGAAGGCCTCAGAATCCGTCTACACCTGGGTTATCCAGGTCAAGAAGATGAAGGCCATCTACTTTATTCTGAACCTGTGTAGCTTTGATGTTACTAACAAGTGTCTGATTGCTGAGGTGTGGTGTCCTGTCAATGATATTCCCATGCTGCGGAGGGCTCTAGAAGAAGGATCGAGAAAAAGCGGAGCGACAGTCCCTTCCTTTGTCAATCGTATCCCCACCAACGACACTCCCCCCACCCTGATAAGGACCAACAAATTTACCTCTGGCTTCCAGAACATCGTGGACGCCTATGGAGTTGGCAGTTACAGAGAGGTTAACCCTGCTCCTTTCACCATCATCACTTTCCCGTTCCTGTTTGCTGTGATGTTTGGGGATCTGGGTCATGGAGTTATCATGGCTCTGTTTGCTCTCTGGATGGTACTGTACGAGAACAACCGCAAACTTAAAAACACCAGGAATGAGATCTGGAACACATTCTTTGAGGGGCGTTATATCATCCTGATGATGGGCCTGTTCTCCATCTACACTGGCCTGATATATAACGACTGTTTCTCAAAGTCCCTTAACATCTTTGGTTCAGGATGGAGTGTGAAGGCCATGTTCGATGCCAAAGTGTGGAAGGATGCTGATATCCGTGGGAATCGTTTTCTCGCTCTGGATCCAAATGTTACGGGAGTTTTCAAAGGACCGTACCCTCTGGGAATTGACCCGATTTGGAACTTGGCATCCAACCGCCTTACATTTCTGAACTCCTATAAGATGAAGATGTCAGTGATATTGGGCGTCATACACATGAGCTTTGGGGTCATCCTGAGCACTTATAATCACTTGCACTTTAGGAAGAAGCACAGCCTATACCTGGTATTTCTCCCTGAGCTCCTGTTCCTGCTGTGTCTGTTTGGCTACCTGGTGTTCATGATATTCTACAAGTGGCTGGTCTTCACTGCTAAGGACTCCAGACTGGCTCCAAGCATCCTCATCCACTTCATTAACATGTTCCTCATGCAGGGTGATGGAGTGCAGCCCCTCTACCCGGGACAGACTGGCCTGCAGGTATTTTTGGTGGTCATTGCTGTTCTCTCTGTGCCGGTCTTACTCCTTGGGAAACCTGTCTACCTTTATTGGTTACACAATGGAAGCCACCGCCTAGGAATGTACAGGGGTTATGAGCGTGTGCGGCGTAACAGTGAAGAGGAGCTCTACCTGATGAGGGCAAATGATATGGAGGAGGGCAGCAGTCACAGTGATCTCTCCACCAGCGGGGAGCGCCAGACAGAGGAGTTTGACTTTGCAGATGAGTTCCTTCATCAGGCCATCCACACTATAGAGTATTGCCTGGGTTGCGTCTCCAACACAGCCTCCTACCTAAGGCTCTGGGCTCTGAGCCTGGCACATGCCCAGCTATCCGAGGTGCTCTGGACCATGGTAATGCGAGTAGGACTACGAATGGACACCAGTCTCGGGGTTTTTTTCCTGGTGCCTGTGTTTGGCCTGTTTGCCGTTCTCACTGTGTCCATCCTCCTAGTAATGGAGGGACTGTCTGCATTCCTTCATGCCCTGCGGCTGCACTGGGTGGAGTTTCAGAATAAATTCTACAGTGGGACTGGAGTCAAGTTTTGCCCcttttccttctctctgctgCCCTCCAGCTTTGAGCATGATGGCTTACTGTGAAGGGACTATCTGGTAATACTGTTAGGTGGTAAATTGAGCCAAAAAAGCCACCAGGTTCCCATGCTTATAAAGACATGTTCCAGAGAAGTCCTCAGGGGATTTAGATTTTTCTTGttgtcttttaaaaatgtaatgtaattaaatTCTTTGGTTAGCTTCACACACTGAAAACCCTGCCCTCCCGACAGTTTCAAGAACACAGACGGTACCGAGTGTACTGTTGAGGAATGTTTTCTTATTGCAAATTTATGTAACAGGGTGTTCTGTACTAAGATCAGTTTGCTTTACTGCACTTGTATGAAAAACCACATCCGCCAAAATTGgaataaatagttaaaagaGAGATAGAATTTTAGTATGAGATAATTTAACACTACAGTAATAAGCAAATAAATGGCCCCAAGGTTAGGTGACACAGCCAACACTTATTATGATAAATGTATtgctggttttggtcttttcatgggatttgctcattaaataacattaaataacattacattataacATTATCCTTATTTATTCATGTCTGTTTTCACCCATTTCTTCTCATCTAATTATTTGTGTCATAACTTTTGGCACAGTTGTGTACATTAATGCAgttattttttactttgttcactttgtttctgttttggCAGATCTGGTTTTCATACACTGGGTAGTGAGCCAACTTTCAGTTACATAGTTCTTGATCAACTTTTTGTTGCACTGACTGCCTTATGAAAGTACAACCAAATATCATTCTTCAGTTTCCCTTGTGTTCTTACTTTGTGGTACCAAAATTACTGCAAAGGATGACTTGTCAGTATTGAAGTGCCCGGGCAGGTGTGTGATGACTAATGTATATACTTTTacagaattattttttaatttattatattttaaaatgtatcataATAAAGATGAATGTTAATGGGGTACGATTTTTACTTCATGCATTCACAGAGTTGCCTGTGCGTCTCACACTTACTGTACAATTTAACATTCCACACATTTGTTGTATCAGCTCTGCTATGCAAGAACCCTTACTTTGAAAGAGCCTATGTCCATATTCAACACGGTGGCCAGGCTGTATTAAATTTTATTAGGAGAACATTGAATGA

Function

symbol description
atp6v0a2 Predicted to enable ATPase binding activity. Involved in cellular iron ion homeostasis and cellular response to increased oxygen levels. Located in lysosomal membrane. Implicated in autosomal recessive cutis laxa type IIA and wrinkly skin syndrome.

NR:

description
PREDICTED: V-type proton ATPase 116 kDa subunit a isoform 2

GO: NA

KEGG:

id description
K02154 ATPeV0A, ATP6N; V-type H+-transporting ATPase subunit a

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039803344.1 True 4110 mRNA 0.45 20 19256786 19269028

Neighbor

gene id symbol gene type direction distance location
tctn2 tctn2 coding upstream 858 19251176 ~ 19255928 (+)
limk2 limk2 coding upstream 29861 19207779 ~ 19226925 (+)
cmklr1 NA coding upstream 134311 19120145 ~ 19122475 (+)
sart3 sart3,LOC102781133 coding upstream 157182 19087797 ~ 19099604 (+)
LOC120560931 coro1c,LOC102291280,LOC106937262,LOC107393983,LOC107091240,LOC102218412 coding upstream 182444 19029407 ~ 19074342 (+)
dnah10 dnah10 coding downstream 508 19269536 ~ 19296674 (+)
emid1 emid1 coding downstream 29527 19298555 ~ 19357146 (+)
ewsr1b ewsr1,LOC102785556 coding downstream 94978 19364006 ~ 19372609 (+)
gas2l1 gas2l1 coding downstream 107166 19376194 ~ 19399253 (+)
ap1b1 ap1b1,LOC102786025 coding downstream 130855 19399883 ~ 19427717 (+)
LOC120560789 NA non-coding upstream 103202 19151533 ~ 19153584 (+)
G62836 NA non-coding upstream 169924 19084934 ~ 19086862 (+)
G62796 NA non-coding upstream 274163 18966083 ~ 18982623 (+)
G62755 NA non-coding upstream 391979 18864575 ~ 18864807 (+)
G62741 NA non-coding upstream 483678 18772755 ~ 18773108 (+)
G63005 LOC104920315,LOC103374896,LOC100704901 non-coding downstream 280382 19549410 ~ 19554906 (+)
G63007 NA non-coding downstream 286355 19555383 ~ 19562350 (+)
G63015 LOC107394186,LOC104941583 non-coding downstream 306533 19575561 ~ 19633642 (+)
G63016 NA non-coding downstream 312944 19581972 ~ 19584473 (+)
G63029 NA non-coding downstream 387204 19656232 ~ 19656496 (+)
tmem119a LOC103353570,LOC104946818 other upstream 175132 19076561 ~ 19081654 (+)
mvk mvk,LOC102798305 other upstream 514387 18737518 ~ 18742399 (+)
acacb acacb other upstream 571323 18661157 ~ 18685463 (+)
tpcn1 tpcn1 other upstream 782055 18441347 ~ 18474731 (+)
tbx5b tbx5,LOC103470367 other upstream 837196 18407348 ~ 18419590 (+)
rasl10a rasl10a other downstream 161373 19430401 ~ 19448950 (+)
c6h2orf68 c21h2orf68,c9h2orf68,LOC104941594,LOC103363183,LOC104920309 other downstream 490568 19759596 ~ 19763524 (+)
vps13a vps13a other downstream 1131919 20400947 ~ 20442093 (+)
wdr31 wdr31,LOC102796061 other downstream 1204623 20473651 ~ 20490586 (+)
G63480 rbm19 other downstream 1407389 20676417 ~ 20677916 (+)

Expression


Co-expression Network