piwil1 (piwil1,LOC102785531)


Basic Information

Item Value
gene id piwil1
gene name piwil1,LOC102785531
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 1501590 ~ 1531972 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039803421.1
aaagtaaaataaaaatgtacaagcGCATTAATTTGCTCAGTGAAGAGGTCTATAACTAAATTGCACTCGTAGATAAATGCACCTGTGGTAAACTTTCTTTCGTCGACGGAGAAAGGACGTTTTCTTCAGAAAGCATCATTTAAGACGGTCCGAAAATGACTGGTCGGGCACGAGCCAGATCAAGAGGCAGAGCACGAGGTCAAGAGACTTCCGCACCGGGAGCGGTAAGAGCGAGCCAGGCTCGAGAGCCTGCACCAGCAGCTCCCCCACCCGCAGAGGGAGAGCTGGTTGgtagagggagacagaaaggtGCTCCAGGACCCTATTCTGCAGAAGctATTCTACAGATTTCAGGCGGATTTCAGCAGGTGAAGTTGGGAGAAAGAGGTGGACGCCGCCGGGATTTTCATGATGCAGGGGTTAACACCAGGCAGGCTATGGAGCATGTTAAGGACTCAAAGTCTGGAACATCTGGTGCTGCCATTCAGTTGACGGCGAACTTCTTTCGCATTGTGTCCCGCCCTCAGTGGGTGCTGTATCAGTACCATGTAGACTTCAAACCACCAATGGAGGCTCGTCGCCTGAGATCTGCCCTCCTCTTTCACCATGAGGAAGTACTTGGCTCAGCGCGGAGCTTTGATGGCGCGCTGCTTTTTTTGCCTCACAGATTGCACAACAAGGAAACTGTGCTCCACAGCGAGACAAGGAATGGAGAGAAGGTTCAGATAACTGTCACCCTGACAAATGAACTGCCACCTACATCGCCAGTGTGCATTCAGTTTTACAACATCATATTCAGAAGGATCTTGAGAATTCTTGACATGCAGCAGATAGGACGCAACTACTACAACCCCAAAGATCCACTGAACATCCCACAGCACAGGCTGACAATCTGGCCTGGATACACCACAACCATTTTGCGGTACGAGTCATCCATTATGCTGTGTACGGACGTAAGCCACAAGGTGTTGCGTAGTGAGACGGTCCTTGACTTTATGGCAAACCTGAGGCAAAAGTGTGGAAATCAACGCTTCCCTGAGATCTGTGCCAAAGAGCTTGTTGGACTCATAGTCCTCACAAAgtacaACAACAAGACCTACAGGATTGATGATATTGCTTGGGATCACACTCCCAACAACACATTCACAAGAGGAGACAAAGACATATCCTTTAAGAACTACTACAAGACTcAATATAACCTGGACATCACTGATGGGAACCAGGTGCTGCTGGTCAGCCATGTGAAGAAGGCGATGGGTCCTGCTGGAGGTCCTCCTCCTGGCCCTGCCATGCTCATCCCAGAGCTGTGCTACCTTACAGGCTTGACTGACAAGATGCGAGCTGATTACAACATCATGAAGGACTTGAGCACCCACACCAAGTTGGAACCAGAGCAGAGGGAGGTTCGCCTCAACAGATTTGTTTCTAATATACACACGAATACTGATGCACAGGCGGAGTTGGATAAGTGGGGACTCAACTTTGATAAGCAGCTCCTGCATCTGACTGGCAGAGTCCTGCCAGCGGAGAGGATTTTCCAGGGACCAAAATCGTATGACTACAACCCCAGGGCAGCAGACTGGTCCAAAGAGATGCGTGGGGTTCCTCTGATCAGCTCTCCTCAGCTGGAAAGCTGGCTCATGCTATACACCCGTCGTAACAGCAACGAAGCCCAGTCCCTCCTGCAGACCCTAAACAGAGTCTCGGGTCCACTTGGTTTCCGCATGCAGAGAGCGGTTATGATAGAGTATGAGGATCATCAGGAGTCTCTTCTCAGAGCCCTGCAGCAAAATGTTGGACCCCAAACGCAGATGGTGGTGGTGGTCCTCCCCAGCAACAGGAAGGACAAGTATGATAGCGTCAAGAAGTACCTCTGTGTGGACAGCCCCGTTCCCAGCCAGTGTGTGGTTTCCCGTACCATAAGCAAACCTCAGACACTCATGACTGTGGCTACCAAGATTGCTCTGCAGATGGCTTGTAAGATGGGAGGAGAGCTCTGGAGTGTGGAAATCCCTCTCAAACAACTGATGATTGTGGGCATTGACTGCTACCATGACACACTTGCTGGGAAAAGGTCCATCGGAGCTCTAGTGGCCAGCCTCAACCAAGGAATGAGCAGGTGGTTCTCAAAGTGCGTTCTGCAGCACAAAGGCCAGGAAATTATGGATGGACTGAAGATGGCCTTGAGTGctGCACTGAAGGCCTATCTGAAGTTCAACAACTGCCTGCCTTCGCGCATCATTGTGTACCGGGATGGAGTGGGAGACGGCCAGCTGCACAGCGTGGTCAACTATGAGGTTTCACAGATCATGGACTCCATCAAGTCCATGGGCCACGACTATGTGCCCAAGCTGAGTGTGGTAGTGGTGAAGAAGCGCATCAGCAGCAGGTTTTTCGCTCACATAAATGGAAAAGTGACCAACCCTCCACCAGGTACCATCGTTGACTCTGAGGTCACCCGTCCAGAGTGGTATGACTTCTACATAGTGAGCCAGGCTGTCCGCAGTGGAAGCGTCTCCCCAACCCACTACAACGTTGTGTACGACACCAGTGGACTGAAGCCTGATCATATGCAGCGACTTACCTACAAGCTGTGTCACATGTACTTCAACTGGCAGGGGATCATCCGCGTGCCCGCTCCCTGCCAGTACGCCCACAAGTTGGCCTTTCTTGTGGGTCAAAGCATCCACAGGGAACCCGGTGTGAAACTGGATGATCTCCTCTTCTACCTATAAAAGGATAAAAAAGACAAGCTATCTGTTTGGCTGTGACTCTTAAGTCACCTTGTGAAAAACCATATGTAAACTTTTGTTACATGAGTTctcttcagtttaaaaaaaatgcaagttaGTTTTGACAGTGCTAAgagtttgtttgcatttctagCCTCAGAATGCCCTGTGTAACAAGTTATGCAGTTCAAGTGCTTTGTTTTACACATTAAAGTCTAATAACTAAGACAGCATTCCCCAGGTCTAAAGCTAGCACATGTGCTAAAATGATAAGTGATGCACCCTGTCTGCTGTTGGAAATACACTTTTGAGgttttgttaagtacatgacATTGTTCAGAGTAAAATGTCACATGGAACTTTAATTGAGTTAACTCAAGCCGGCCCTGAAATGAGAAATATTTCCGTCTGTGTCGTTATTGTATTCACATAAAACTTCATTACCACTATTA
>XM_039803422.1
aaagtaaaataaaaatgtacaagcGCATTAATTTGCTCAGTGAAGAGGTCTATAACTAAATTGCACTCGTAGATAAATGCACCTGTGGTAAACTTTCTTTCGTCGACGGAGAAAGGACGTTTTCTTCAGAAAGCATCATTTAAGACGGTCCGAAAATGACTGGTCGGGCACGAGCCAGATCAAGAGGCAGAGCACGAGGTCAAGAGACTTCCGCACCGGGAGCGAGCCAGGCTCGAGAGCCTGCACCAGCAGCTCCCCCACCCGCAGAGGGAGAGCTGGTTGgtagagggagacagaaaggtGCTCCAGGACCCTATTCTGCAGAAGctATTCTACAGATTTCAGGCGGATTTCAGCAGGTGAAGTTGGGAGAAAGAGGTGGACGCCGCCGGGATTTTCATGATGCAGGGGTTAACACCAGGCAGGCTATGGAGCATGTTAAGGACTCAAAGTCTGGAACATCTGGTGCTGCCATTCAGTTGACGGCGAACTTCTTTCGCATTGTGTCCCGCCCTCAGTGGGTGCTGTATCAGTACCATGTAGACTTCAAACCACCAATGGAGGCTCGTCGCCTGAGATCTGCCCTCCTCTTTCACCATGAGGAAGTACTTGGCTCAGCGCGGAGCTTTGATGGCGCGCTGCTTTTTTTGCCTCACAGATTGCACAACAAGGAAACTGTGCTCCACAGCGAGACAAGGAATGGAGAGAAGGTTCAGATAACTGTCACCCTGACAAATGAACTGCCACCTACATCGCCAGTGTGCATTCAGTTTTACAACATCATATTCAGAAGGATCTTGAGAATTCTTGACATGCAGCAGATAGGACGCAACTACTACAACCCCAAAGATCCACTGAACATCCCACAGCACAGGCTGACAATCTGGCCTGGATACACCACAACCATTTTGCGGTACGAGTCATCCATTATGCTGTGTACGGACGTAAGCCACAAGGTGTTGCGTAGTGAGACGGTCCTTGACTTTATGGCAAACCTGAGGCAAAAGTGTGGAAATCAACGCTTCCCTGAGATCTGTGCCAAAGAGCTTGTTGGACTCATAGTCCTCACAAAgtacaACAACAAGACCTACAGGATTGATGATATTGCTTGGGATCACACTCCCAACAACACATTCACAAGAGGAGACAAAGACATATCCTTTAAGAACTACTACAAGACTcAATATAACCTGGACATCACTGATGGGAACCAGGTGCTGCTGGTCAGCCATGTGAAGAAGGCGATGGGTCCTGCTGGAGGTCCTCCTCCTGGCCCTGCCATGCTCATCCCAGAGCTGTGCTACCTTACAGGCTTGACTGACAAGATGCGAGCTGATTACAACATCATGAAGGACTTGAGCACCCACACCAAGTTGGAACCAGAGCAGAGGGAGGTTCGCCTCAACAGATTTGTTTCTAATATACACACGAATACTGATGCACAGGCGGAGTTGGATAAGTGGGGACTCAACTTTGATAAGCAGCTCCTGCATCTGACTGGCAGAGTCCTGCCAGCGGAGAGGATTTTCCAGGGACCAAAATCGTATGACTACAACCCCAGGGCAGCAGACTGGTCCAAAGAGATGCGTGGGGTTCCTCTGATCAGCTCTCCTCAGCTGGAAAGCTGGCTCATGCTATACACCCGTCGTAACAGCAACGAAGCCCAGTCCCTCCTGCAGACCCTAAACAGAGTCTCGGGTCCACTTGGTTTCCGCATGCAGAGAGCGGTTATGATAGAGTATGAGGATCATCAGGAGTCTCTTCTCAGAGCCCTGCAGCAAAATGTTGGACCCCAAACGCAGATGGTGGTGGTGGTCCTCCCCAGCAACAGGAAGGACAAGTATGATAGCGTCAAGAAGTACCTCTGTGTGGACAGCCCCGTTCCCAGCCAGTGTGTGGTTTCCCGTACCATAAGCAAACCTCAGACACTCATGACTGTGGCTACCAAGATTGCTCTGCAGATGGCTTGTAAGATGGGAGGAGAGCTCTGGAGTGTGGAAATCCCTCTCAAACAACTGATGATTGTGGGCATTGACTGCTACCATGACACACTTGCTGGGAAAAGGTCCATCGGAGCTCTAGTGGCCAGCCTCAACCAAGGAATGAGCAGGTGGTTCTCAAAGTGCGTTCTGCAGCACAAAGGCCAGGAAATTATGGATGGACTGAAGATGGCCTTGAGTGctGCACTGAAGGCCTATCTGAAGTTCAACAACTGCCTGCCTTCGCGCATCATTGTGTACCGGGATGGAGTGGGAGACGGCCAGCTGCACAGCGTGGTCAACTATGAGGTTTCACAGATCATGGACTCCATCAAGTCCATGGGCCACGACTATGTGCCCAAGCTGAGTGTGGTAGTGGTGAAGAAGCGCATCAGCAGCAGGTTTTTCGCTCACATAAATGGAAAAGTGACCAACCCTCCACCAGGTACCATCGTTGACTCTGAGGTCACCCGTCCAGAGTGGTATGACTTCTACATAGTGAGCCAGGCTGTCCGCAGTGGAAGCGTCTCCCCAACCCACTACAACGTTGTGTACGACACCAGTGGACTGAAGCCTGATCATATGCAGCGACTTACCTACAAGCTGTGTCACATGTACTTCAACTGGCAGGGGATCATCCGCGTGCCCGCTCCCTGCCAGTACGCCCACAAGTTGGCCTTTCTTGTGGGTCAAAGCATCCACAGGGAACCCGGTGTGAAACTGGATGATCTCCTCTTCTACCTATAAAAGGATAAAAAAGACAAGCTATCTGTTTGGCTGTGACTCTTAAGTCACCTTGTGAAAAACCATATGTAAACTTTTGTTACATGAGTTctcttcagtttaaaaaaaatgcaagttaGTTTTGACAGTGCTAAgagtttgtttgcatttctagCCTCAGAATGCCCTGTGTAACAAGTTATGCAGTTCAAGTGCTTTGTTTTACACATTAAAGTCTAATAACTAAGACAGCATTCCCCAGGTCTAAAGCTAGCACATGTGCTAAAATGATAAGTGATGCACCCTGTCTGCTGTTGGAAATACACTTTTGAGgttttgttaagtacatgacATTGTTCAGAGTAAAATGTCACATGGAACTTTAATTGAGTTAACTCAAGCCGGCCCTGAAATGAGAAATATTTCCGTCTGTGTCGTTATTGTATTCACATAAAACTTCATTACCACTATTA

Function

symbol description
piwil1 Enables piRNA binding activity. Involved in several processes, including gene silencing by RNA; germ cell development; and piRNA metabolic process. Located in P granule. Is expressed in several structures, including blastodisc; central nervous system; eye; reproductive system; and unfertilized egg. Orthologous to several human genes including PIWIL1 (piwi like RNA-mediated gene silencing 1).

NR:

description
piwi-like protein 1

GO:

id name namespace
GO:0007281 germ cell development biological_process
GO:0031047 gene silencing by RNA biological_process
GO:0009653 anatomical structure morphogenesis biological_process
GO:0034587 piRNA metabolic process biological_process
GO:0043186 P granule cellular_component
GO:0034584 piRNA binding molecular_function

KEGG:

id description
K02156 AUB, PIWI; aubergine

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039803421.1 True 3184 mRNA 0.49 21 1501590 1531972
XM_039803422.1 False 3175 mRNA 0.49 21 1501590 1531972

Neighbor

gene id symbol gene type direction distance location
fzd10 fzd10 coding upstream 20964 1477088 ~ 1480626 (+)
glt1d1 glt1d1 coding upstream 105395 1371784 ~ 1396195 (+)
si:dkeyp-14d3.1 tmem132c coding upstream 171967 1157470 ~ 1329623 (+)
LOC120560446 LOC104936599 coding upstream 374506 1105964 ~ 1127084 (+)
adamts13 adamts13 coding upstream 449307 1029257 ~ 1052283 (+)
LOC120560673 LOC107389948 coding downstream 133012 1664984 ~ 1667532 (+)
adgrd1 adgrd1 coding downstream 148109 1680081 ~ 1720893 (+)
ulk1a NA coding downstream 189833 1721805 ~ 1735615 (+)
ep400 ep400 coding downstream 204706 1736678 ~ 1771673 (+)
ncor2 ncor2 coding downstream 272664 1804636 ~ 1948715 (+)
G58269 NA non-coding upstream 144341 1356850 ~ 1357249 (+)
G58260 NA non-coding upstream 167707 1333501 ~ 1333883 (+)
G58256 NA non-coding upstream 169592 1331546 ~ 1331998 (+)
G58255 NA non-coding upstream 170252 1331046 ~ 1331338 (+)
G58237 NA non-coding upstream 388550 1112754 ~ 1113040 (+)
G58347 NA non-coding downstream 169935 1701907 ~ 1728333 (+)
G58372 NA non-coding downstream 401035 1933007 ~ 1951272 (+)
G58383 NA non-coding downstream 530102 2062074 ~ 2062569 (+)
G58384 NA non-coding downstream 530648 2062620 ~ 2063002 (+)
G58390 lgi3 non-coding downstream 535613 2067585 ~ 2071483 (+)
lmx1bb lmx1b,LOC102213269,LOC100696266 other upstream 663729 789405 ~ 837861 (+)
LOC120560799 NA other upstream 1289207 210742 ~ 212383 (+)
dock5 dock5 other downstream 741706 2273678 ~ 2312665 (+)
lman2lb NA other downstream 1346402 2878374 ~ 2883861 (+)
LOC120560521 tjp2 other downstream 1903193 3435165 ~ 3522756 (+)
G59086 NA other downstream 2585307 4117279 ~ 4117631 (+)
G59172 sub1 other downstream 2892169 4424141 ~ 4429981 (+)

Expression


Co-expression Network