zdhhc12a (zdhhc12,LOC100694502,LOC102293169,LOC101476542)


Basic Information

Item Value
gene id zdhhc12a
gene name zdhhc12,LOC100694502,LOC102293169,LOC101476542
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 34280979 ~ 34289653 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039803434.1
CGCAACTCTCCGTATcaaaataaggaagaggctaaTGGATAATATAGCTACAAccagagaaaaaaatataaaaaatctgCATGTAttactgtagctagctacatgatAACTTTATTTATTCCACGTTTATTTCCTAGCCTAGTTAAAAAcgtattttatttaatatgtatttaaatattgtttgttttattttcgtAAAATAGCTAGCTATGCTGTTGCTACCGAGGCTAGCTAGTTAGCAGCGGTGCTAATAGATTAAAATGATGCAGAACATGTTTCGGACCGGGTTTCTGGTTCGGGCCACACACACCCTGCTCACTTGGGTTATAACCCTCATACTGTTCCTGCACAACACCGatTTGCGGAAGTGTGAGGAGCGAGGCGAGCTGTTGCTGCCAGTTCTATTCTTCCTCCTGGTCGTGCTGTCGGTGCTCTTATACTTTGCTGTTTCTTTAATGGACCCTGGCTTCGTTCTCGCTGACAGTGTCAAGGGTTCAAATGAGGAAATGGAGTCGATGATTCCTCAGTCTTCGACCCCTCGGCTGCGGCGCTGTGGACATTGCCTGCTGCAGCAGCAGCCAATGAGAGCGAAGCACTGTCAGACGTGTAAACACTGCGTTCGTCGCTTCGACCACCACTGCCCCTGGATCGAGAACTGCGTGGGAGAGAGGAACCACCGCTGGTTCATCGTCTACCTGCTGGTGCAGCTGCTCGCTCTTCTGTGGGCGCTTCACATCGCCCTGTCTGGCATCTCACCCAGCCTCACATGGGCGCTGTGGTTCAGAGTGAACGGGTTCCTGTTGGCGGCGCTGGCTGTCGTCGGTGTCTTCTCTGTGGTGGCGGCGATGCTGCTGGGCATCCACCTTTACCTGGTCTCCATCAACTGCACCACCTGGGAGTTCATGTCACGTCACAGGATCGCGTACCTGAAGAACTGCGGCGACGAGGAGAACCCGTTTGACCGCGGAGTCTTCTGCAACATGTGGGATTTCTTCTGCATCTGCAGGACGGTGGCGTGGGAGCAAACGTACGACAGAAACACCCCAAATTCTGTCTGAACCTCCAACCAGACGGCACGTCTCCGGGAAAGAAAATCATTTTTGAACCTCGACAGCAGAGATTTGAATTATTTTATGTTACCTTTTAGGTCGAAGTTTACAACTGAAGTGGACCACGAAATGTTTCCTAACTACCTGCAAACGTTGTTGGTTGTTAGAGCAGACGTGCAGTAAgcttattatatatatagtttaccaacttttccaacatttttcatACAGATAACAAAACATGATACTTTGATTTGCTGGCTTTTGactacaaacacattttaaaaacacattggcCTGTTTTTTGGTCAGACAACTTTAGTcctgactgaaatatctcaaaaactattggatggattgtcattaaataaattaacattTATGTTTCTTAGAGGATAAATCCTAATGCCTTTGGTGTAGGTATGGCTGTCCCGAATCAGGATCTTTAGGGTCTTTTTTGAAATTGATGCatcttatatataatatattattataattaaagcTTAATCCGACAAAAGAGTAAGTAAGCAAGGCTACAAATCTGACATTCTGCGCTTTTTATTGgttcttcacagtttgatactTGACTCTTTTCTGCCTGCAGTATGTCTAGAATATCACTGGGATTAGTACACATGAGATTACAAGACCCAACACTAAAGGTTATTAAATTTAATTCCTCAGGTCTAGTCACCACTTTCCTTTCTGTAAATGTTTGCGTTGTTGCCTCGTGAGAGTGGTGACCTCCACATCTGAACACTAATCGCCTTTACGTCTGGTGCGATTTATGTCTTGTGCCTTTGATTTAATGTAACTGTTTGTatattgatgattattttgaCTATTACTATGAGATAATCTTCTCACCGAGAGGCAAATAttttacaacctttttttttttttactgtatttgttCGGTTTGTATTTATTGACAATAAAAGTACATTAAAACACTGA
>XM_039803435.1
CGCAACTCTCCGTATcaaaataaggaagaggctaaTGGATAATATAGCTACAAccagagaaaaaaatataaaaaatctgCATGTAttactgtagctagctacatgatAACTTTATTTATTCCACGTTTATTTCCTAGCCTAGTTAAAAAcgtattttatttaatatgtatttaaatattgtttgttttattttcgtAAAATAGCTAGCTATGCTGTTGCTACCGAGGCTAGCTAGTTAGCAGCGGTGCTAATAGATTAAAATGATGCAGAACATGTTTCGGACCGGGTTTCTGGTTCGGGCCACACACACCCTGCTCACTTGGGTTATAACCCTCATACTGTTCCTGCACAACACCGatTTGCGGAAGTGTGAGGAGCGAGGCGAGCTGTTGCTGCCAGTTCTATTCTTCCTCCTGGTCGTGCTGTCGGTGCTCTTATACTTTGCTGTTTCTTTAATGGACCCTGGCTTCGTTCTCGCTGACAGTGTCAAGGGTTCAAATGAGGAAATGGAGTCGATGATTCCTCAGTCTTCGACCCCTCGGCTGCGGCGCTGTGGACATTGCCTGCTGCAGCAGCCAATGAGAGCGAAGCACTGTCAGACGTGTAAACACTGCGTTCGTCGCTTCGACCACCACTGCCCCTGGATCGAGAACTGCGTGGGAGAGAGGAACCACCGCTGGTTCATCGTCTACCTGCTGGTGCAGCTGCTCGCTCTTCTGTGGGCGCTTCACATCGCCCTGTCTGGCATCTCACCCAGCCTCACATGGGCGCTGTGGTTCAGAGTGAACGGGTTCCTGTTGGCGGCGCTGGCTGTCGTCGGTGTCTTCTCTGTGGTGGCGGCGATGCTGCTGGGCATCCACCTTTACCTGGTCTCCATCAACTGCACCACCTGGGAGTTCATGTCACGTCACAGGATCGCGTACCTGAAGAACTGCGGCGACGAGGAGAACCCGTTTGACCGCGGAGTCTTCTGCAACATGTGGGATTTCTTCTGCATCTGCAGGACGGTGGCGTGGGAGCAAACGTACGACAGAAACACCCCAAATTCTGTCTGAACCTCCAACCAGACGGCACGTCTCCGGGAAAGAAAATCATTTTTGAACCTCGACAGCAGAGATTTGAATTATTTTATGTTACCTTTTAGGTCGAAGTTTACAACTGAAGTGGACCACGAAATGTTTCCTAACTACCTGCAAACGTTGTTGGTTGTTAGAGCAGACGTGCAGTAAgcttattatatatatagtttaccaacttttccaacatttttcatACAGATAACAAAACATGATACTTTGATTTGCTGGCTTTTGactacaaacacattttaaaaacacattggcCTGTTTTTTGGTCAGACAACTTTAGTcctgactgaaatatctcaaaaactattggatggattgtcattaaataaattaacattTATGTTTCTTAGAGGATAAATCCTAATGCCTTTGGTGTAGGTATGGCTGTCCCGAATCAGGATCTTTAGGGTCTTTTTTGAAATTGATGCatcttatatataatatattattataattaaagcTTAATCCGACAAAAGAGTAAGTAAGCAAGGCTACAAATCTGACATTCTGCGCTTTTTATTGgttcttcacagtttgatactTGACTCTTTTCTGCCTGCAGTATGTCTAGAATATCACTGGGATTAGTACACATGAGATTACAAGACCCAACACTAAAGGTTATTAAATTTAATTCCTCAGGTCTAGTCACCACTTTCCTTTCTGTAAATGTTTGCGTTGTTGCCTCGTGAGAGTGGTGACCTCCACATCTGAACACTAATCGCCTTTACGTCTGGTGCGATTTATGTCTTGTGCCTTTGATTTAATGTAACTGTTTGTatattgatgattattttgaCTATTACTATGAGATAATCTTCTCACCGAGAGGCAAATAttttacaacctttttttttttttactgtatttgttCGGTTTGTATTTATTGACAATAAAAGTACATTAAAACACTGA

Function

symbol description
zdhhc12 Enables palmitoyltransferase activity. Involved in protein palmitoylation. Located in Golgi apparatus and endoplasmic reticulum.

NR:

description
PREDICTED: probable palmitoyltransferase ZDHHC12 isoform X1

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0016021 integral component of membrane cellular_component
GO:0016746 transferase activity, transferring acyl groups molecular_function
GO:0008270 zinc ion binding molecular_function

KEGG:

id description
K18932 ZDHHC; palmitoyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039803434.1 True 2006 mRNA 0.43 5 34280979 34289653
XM_039803435.1 False 2003 mRNA 0.43 5 34280979 34289653

Neighbor

gene id symbol gene type direction distance location
slc25a25a slc25a25,LOC102778434,LOC103370741 coding upstream 724 34272947 ~ 34280255 (+)
cnot6l cnot6l coding upstream 93359 34170475 ~ 34187620 (+)
paqr3a paqr3,LOC104954486,LOC103364579,LOC102780134 coding upstream 490169 33779007 ~ 33790810 (+)
prkg2 prkg2 coding upstream 936964 33303339 ~ 33344015 (+)
rasgef1ba rasgef1b coding upstream 986878 33156914 ~ 33294101 (+)
LOC120560630 set,LOC102777863,LOC107083999,LOC100696975,LOC105014167 coding downstream 20447 34310100 ~ 34314260 (+)
LOC120560629 LOC100693693 coding downstream 26653 34316306 ~ 34330925 (+)
gle1 gle1 coding downstream 42189 34331842 ~ 34344199 (+)
si:ch211-251j10.3 ralgds,LOC102776401 coding downstream 62058 34351711 ~ 34421494 (+)
smarcb1a smarcb1,LOC103361055,LOC106521870,LOC108242792,LOC100696262,LOC105917974 coding downstream 138168 34427821 ~ 34438507 (+)
LOC120560041 NA non-coding upstream 403972 33876175 ~ 33877007 (+)
LOC120561187 NA non-coding upstream 508445 33769844 ~ 33772534 (+)
G66571 NA non-coding upstream 525024 33755569 ~ 33755955 (+)
G66568 NA non-coding upstream 555197 33725520 ~ 33725782 (+)
G66522 bmp3 non-coding upstream 928029 33351699 ~ 33352950 (+)
G66689 NA non-coding downstream 141289 34430942 ~ 34439928 (+)
G66692 LOC104949787,LOC104934882 non-coding downstream 166837 34456490 ~ 34456749 (+)
G66695 NA non-coding downstream 196885 34486538 ~ 34486751 (+)
G66769 NA non-coding downstream 218489 34508142 ~ 34509613 (+)
G66830 NA non-coding downstream 525936 34815589 ~ 34816327 (+)
G66578 NA other upstream 504581 33775925 ~ 33776398 (+)
antxr2a antxr2 other upstream 677354 33517599 ~ 33603625 (+)
cds1 cds1,LOC103364266,LOC106922331,LOC103134889,LOC107386064 other upstream 1168163 33077246 ~ 33112816 (+)
slc39a14 slc39a14 other upstream 1668041 32572200 ~ 32612938 (+)
LOC120560610 ypel1,ypelc,YPEL1,ypeld,LOC103374080,LOC106586007,LOC106931471 other upstream 1770242 32477038 ~ 32510737 (+)
cfap157 NA other downstream 224357 34514010 ~ 34527405 (+)
LOC120561070 NA other downstream 476277 34765930 ~ 34773806 (+)
G66832 NA other downstream 571846 34861499 ~ 34864690 (+)
LOC120561428 fam163b,LOC103374717,LOC102797860,LOC101061299,LOC102298266,LOC101485828,LOC104964271,LOC102215914 other downstream 757191 35046844 ~ 35059631 (+)
LOC120560625 cep120 other downstream 1233012 35522665 ~ 35549231 (+)

Expression


Co-expression Network