LOC120560681 (LOC108242800,LOC106510782,LOC101474983)


Basic Information

Item Value
gene id LOC120560681
gene name LOC108242800,LOC106510782,LOC101474983
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 31315299 ~ 31316422 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039803436.1
CAACCAGCGTCCGGTCTCCTCAGCGAGCTCGGCAAGCAAGGGGCGGTGGGGGGTCAAAGATACGCAGAGAAACGGGCTGCTGGTGGCGAAGATGGCGGATGGGGACAGTGGCAGTGAGCGCGGTGGTggaggcagcagcagcggcggagggggaggaggaggaggcggcagCGGATTTCAGCAATACCAGCGGGAAGTGGAGACCCAGGAGCTGGCGTCGAAGCGGCTGGACATTCAGAACAAACGCTTCTACCTTGATGTAAAGCAGAACGCCAAAGGCCGGTTCATCAAAATCGCCGAGGTTGGCGCTGGGGGCTCGAAAAGTCGGCTGACCCTCTCTATGTCAGTTGCGGCAGAGTTCCGCGACTACCTGGGGGATTTCATAGAGCACTACGCCCAGCTTGGGCCTAGCACCCCGGAGCAGATCGCTCAATCATCCGGTGGGGATGACAGCGGGCCTAGACGGGCCCTGAAGAGCGAGTTCCTGGTGCGTGAGAACCGAAAATACTACCTCGACCTGAAGGAGAACCAGCGGGGTCGGTTTCTCCGGATACGGCAGACCGTCAACCGAGGCCCCGGTTTCGGAGTTGGAGTGGGTGGCATCCCCGGGGCTGGCCTGCAGGCCGGACAAACCATTGCACTACCGGCTCAAGGCTTAATAGAGTTTCGTGACGCTTTGGCCAAGTTGATAGACGACTACGGGGGAGATGAGGAGGAGCTGGCCGGCGGTGGAGGGGCCGGGGGCTACAGCGAGCTTCCGGAGGGCACCTCGATCATGGTGGACTCCAAGCGGTTCTTCTTTGACGTTGGGTCCAACAAGTACGGAGTTTTCTTACGGGTGAGCGAAGTGAAGCCCAGTTACAGAAACTCTATAACAATCCCCTTCAAGGCGTGGGGCAAGTTCGGGGGAGCGTTCAGCCGCTACGCcgaggaaatgaaagagatccaggagcGGCACCGTGATAAGATGTACGAGAGGAGAGCCGGAGAGGAGTCGGAGGGCGACGACGTGGACGACGATTGATGGAGAGGTGGTTACATGTGATGAAGCTGACAACATGATGCAAAGCCTGGCGttaaacagagagagatgaaCGACTATTCTGTGCATGACGAATCGAACT

Function

NR:

description
PREDICTED: transcriptional activator protein Pur-beta

GO: NA

KEGG:

id description
K21799 PURB; transcriptional activator protein Pur-beta

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039803436.1 True 1124 mRNA 0.59 1 31315299 31316422

Neighbor

gene id symbol gene type direction distance location
hs3st1l2 LOC102790965,LOC100694141,LOC103362344,LOC102206456,LOC102298111 coding upstream 14854 31273898 ~ 31300445 (+)
LOC120559964 NA coding upstream 74259 31237268 ~ 31241040 (+)
LOC120561480 NA coding upstream 186539 31126860 ~ 31128760 (+)
LOC120561479 NA coding upstream 190625 31122558 ~ 31124674 (+)
si:dkey-174n20.1 LOC104959464,LOC104920648,LOC101478912,LOC102310039,LOC100693286 coding upstream 193388 31117825 ~ 31121911 (+)
LOC120561065 NA coding downstream 140078 31456500 ~ 31461444 (+)
LOC120560109 NA coding downstream 168641 31485063 ~ 31489526 (+)
LOC120560726 LOC103353430,LOC108242814,LOC103397877 coding downstream 196886 31513308 ~ 31565163 (+)
dapk1 dapk1 coding downstream 253620 31570042 ~ 31660267 (+)
ctsla LOC104932682 coding downstream 354103 31670525 ~ 31675115 (+)
G66071 NA non-coding upstream 3852 31310943 ~ 31311447 (+)
G66072 NA non-coding upstream 13553 31301510 ~ 31301746 (+)
G66015 NA non-coding upstream 161131 31130041 ~ 31154168 (+)
G65958 xbp1 non-coding upstream 405829 30906356 ~ 30909470 (+)
G65951 NA non-coding upstream 477525 30754359 ~ 30837774 (+)
G66069 NA non-coding downstream 1154 31317576 ~ 31318474 (+)
G66092 LOC103362337,LOC101472255,LOC102204493,LOC102311726,LOC100707713 non-coding downstream 34776 31351198 ~ 31409156 (+)
G66107 NA non-coding downstream 93533 31409955 ~ 31418260 (+)
G66117 NA non-coding downstream 145376 31461798 ~ 31510356 (+)
LOC120560111 LOC108434293 non-coding downstream 162079 31478501 ~ 31485001 (+)
LOC120561064 NA other upstream 422019 30857580 ~ 30893280 (+)
G65899 taok3 other upstream 737140 30574086 ~ 30578159 (+)
LOC120560820 NA other upstream 1063780 30246887 ~ 30251519 (+)
fbxo21 fbxo21 other upstream 1103191 30186848 ~ 30212108 (+)
ubac1 ubac1 other upstream 1963543 29344580 ~ 29351756 (+)
dmrt3a dmrt3 other downstream 491373 31807795 ~ 31811553 (+)
adamts3 adamts3,LOC100699019,LOC101479253,LOC102313231 other downstream 716154 32032576 ~ 32209534 (+)
G66231 NA other downstream 809871 32126293 ~ 32136966 (+)
G66256 slc4a5,LOC102211952,LOC101484802 other downstream 1006085 32322507 ~ 32329990 (+)
G66263 LOC106536102 other downstream 1048438 32364860 ~ 32369984 (+)

Expression


Co-expression Network