erlin2 (LOC100709255,LOC101468631,LOC102303107,LOC102789125,LOC102208735)


Basic Information

Item Value
gene id erlin2
gene name LOC100709255,LOC101468631,LOC102303107,LOC102789125,LOC102208735
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 7182813 ~ 7212011 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039803504.1
AGTTAGACGCCAAACACTCTGATACTCTaccgaagaagaagaagaagaagaaggtagCCGGTGCCAGAGGTGCCTGCTTCTTATCTGTTGTTCGTGGCCCTCTCCGGTAAAGTAACAGGATGGCCCAGTGGGGTGTCATACTCGCAGTAATCGGCGCTCTCGGAGGAGCAGCGCTCCTATCCTCCGTGCACAAGATCGATGAGGGACACACTGGAGTTTACTACAGGGGAGGGGCTCTCCTGACCATCACCAGTGGCCCTGGTTTCCATCTTATGCTTCCATTCATCACCTCCTACAAGTCTGTTCAGACAACGCTGCAGACAGACGAGGTGAAGAATGTACCATGCGGCACGAGtGGAGGAGTGATGATTTACTTTGACCGTATAGAAGTGGTGAACTATCTCGTTCAATCAGCAGTGTACGACATAGTGAGGAACTTCACGGCAGACTACGACAAAGCATTGATATTCAACAAGGTTCACCATGAGCTCAACCAGTTCTGCAGTGTTCACTCGCTGCAGGAGGTCTACATCGGCTTGTTCGACCAAATCGATGAAAACCTGAAGTTGACACTACAAGAGGATCTAACATCCATGGCACCAGGACTCATCATACAGGCGGTCCGTGTCACAAAACCCAATATCCCAGAGAGCATTCGCAGGAACTACGAGCTCatGGAGAGCGAGAAGACGAAGCTGCTTGTCTCTGTACAGACACAGAAGGTTGTGGAGAAGGAGGCAGAAACCGAAAGGATCAAAGCTGTGATAGAGGCTGAGAAAGTGGCTCAAGTGGCAGAGATCAAGTTTGGACAGAAGGTGATGGAGaaggaaactgaaaaaaggATCTCTGAAATCGAAGACGGCGCTTTCCTGGCCCAGCAGAGAGCCAGGGCCGATGCAGAGTTCTATACGTCACAGAGAATCGCAGAGGCCAATAAGCTGAAGTTAACACCAGAGTACTTGCAGCTAATGAAGTACAAGGCCATCGCAGCCAACAGCAAAATCTACTTTGGGAACGAAATACCCCAGATGTTTGTGGACTCTGGCTCTGCAGGGAGCTCTATCAAGGCCTCTGCAGCCATGGACATTGTTGCTGAGCAGATCCTGGACCTGGATTAGCAAGGGAAGGGAAGTATTGGGGCCCACAGGGCCACCCAGGGGTGGAGGACCGTCTGCTGCAGGGCAGGGCCCCGGCCCACAGCCTAGCTGGCAACTTCTCCCCTCTGACCCGGTGAAGCTCTGCTGACCAGGGCCCGTATTTCTCAAACATCTCCGAATACCTGCTAGAAATCACACTGGAAGTTTGACTAGGATGTAATGTTATCCTAGCTCAGAGCCAGACGACTTGAGTTATTTAAGAAGCTTCCTATTCTTCTACTCTGTTCAGATAGAGAATGAGATTGTCTAGACTAggtaaatatgaaataaaaccaAGATGAAATAGCATCACCCGTGGGTGTATAAGTAGCTCCTTAAAGATATAATACGCAATTCTTtcgtcaaaaaaaaaacatgtttagaCTAATACAAAAGTTATCCCTCTCAATCCTCATAA

Function

NR:

description
erlin-2 isoform X1

GO: NA

KEGG:

id description
K23341 ERLIN; erlin

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039803504.1 True 1554 mRNA 0.49 12 7182813 7212011

Neighbor

gene id symbol gene type direction distance location
ch25hl3 NA coding downstream 13113 7161301 ~ 7169700 (-)
hk2 LOC103369118,LOC106531304 coding downstream 241077 6895202 ~ 6941736 (-)
tbx1 tbx1 coding downstream 1120951 6048963 ~ 6061862 (-)
tango2 tango2 coding downstream 1515604 5643204 ~ 5667209 (-)
dgcr8 dgcr8,LOC102791485 coding downstream 1556428 5607031 ~ 5626385 (-)
LOC120561006 NA coding upstream 8830 7220841 ~ 7223583 (-)
znf703 znf703,LOC103397455 coding upstream 70405 7282416 ~ 7285425 (-)
LOC120560561 tia1 coding upstream 284500 7496511 ~ 7510835 (-)
trnag-ccc NA coding upstream 299210 7511221 ~ 7511291 (-)
LOC120560563 NA coding upstream 311099 7523110 ~ 7526491 (-)
G59756 NA non-coding downstream 34007 7101573 ~ 7148806 (-)
G59743 NA non-coding downstream 99600 7025606 ~ 7083213 (-)
G59734 NA non-coding downstream 153400 6976605 ~ 7029413 (-)
LOC120560930 NA non-coding upstream 153421 7365432 ~ 7366200 (-)
LOC120560966 NA non-coding upstream 154246 7366257 ~ 7367921 (-)
G59802 NA non-coding upstream 212152 7424163 ~ 7424364 (-)
G59855 NA non-coding upstream 281877 7493888 ~ 7494179 (-)
G59876 NA non-coding upstream 362709 7574720 ~ 7575530 (-)
G59739 LOC102786375,LOC102210956 other downstream 185957 6991203 ~ 6996856 (-)
G59563 NA other downstream 659139 6522759 ~ 6523674 (-)
G59521 NA other downstream 756002 6426206 ~ 6426811 (-)
LOC120561494 NA other downstream 1591003 5589573 ~ 5591810 (-)
LOC120561493 NA other downstream 1716376 5466223 ~ 5466437 (-)
G59881 NA other upstream 372075 7584086 ~ 7584519 (-)
specc1la specc1l other upstream 515549 7727560 ~ 7766012 (-)
anapc7 anapc7 other upstream 665388 7877399 ~ 7887425 (-)
G60145 NA other upstream 1189011 8401022 ~ 8402566 (-)
tacr1a tacr1,LOC102799894,LOC100703444,LOC102196095 other upstream 1431392 8643403 ~ 8727443 (-)

Expression


Co-expression Network