LOC120560726 (LOC103353430,LOC108242814,LOC103397877)


Basic Information

Item Value
gene id LOC120560726
gene name LOC103353430,LOC108242814,LOC103397877
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 31513308 ~ 31565163 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039803521.1
GTGGAGCGGAGAGGCGGGTGGTGGGAAGCCAGGAGGAAAAACATTAGCCCTCATTTCTTTTCACTTAAGAGGAGATTTCTTGTTTCTTTCCAGGACTGCAGCAGCTGGCGACTCGCAGCCCGGCCGCAGGACGCACCGCACAGAGCCAGGACGCACGACTGATATGATGGATAGATAGCAGGAAGAAGAGCAGGAAGAGAAGATGACATTCTGGACTGGCATGGACTGTTttaggaagaaagagagagAGCTGGAAAGGAAACTCCGCGCCAACGACCGCGAGTACAACCTCTCCTTTAAATATGCGACAAACGCCATCAAGACCTCGAAGTACAACCCCTTCACCTTCCTACCTCTTAACCTGTTCGAGCAGTTCCAAAGGATTGCTAATGCCTACTTCCTGTTTCTGCTGGTGCTCCAGGTGATTCCTCAGATCTCCTCTCTGTCGTGGTTCACCACAGTCGTGCCTCTGGTCCTCGTGCTGACAGTCACCGCTGCCAAAGATGCCACCGACGATATCAATCGCCACAGGAGCGACAATCAAGTCAACAACAGAAAAGTTCAAGTCCTGATTGACAGAAAACTGCGGAGCGAGAAATGGATGGATGTCCAGGTGGGAGACATCATCAGGCTGGAAAACAACCAGTTTGTCACCGCCGACCTCCTGTTGCTCTCCAGCAGTGAACCACTCAACTTGGTGTACATTGAGACAGCAGAACTGGATGGagAGACTAACCTGAAGGTGAGACAGGCCCTGACTGTGACAGGAGACCTGGGAGAAGATAGCGAAAAACTGGCAGACTTCAACGGCGAGGTACGCTGTGAACCCCCCAACAACCGCCTCGACCGCTTCACAGGAACGCTAACCTACGTCGGTCAGAAATACCCGCTGGACAACGAGAAGATCCTGCTGCGAGGCTGCACCCTGAGGAACACCGAGTGGTGCTTTGGACTCGTGCTGTTTGCAGGTCCAGAGACGAAGCTGATGCAGAACTCTGGGAAAACTACGTTTAAGAGGACCAGTATAGACCGACTGATGAATGTCCTAGTCCTTTGTATTTTTGGTTTCCTGGCCTTCATGTGCACCATCCTTGCAATAGGAAACTGCATCTGGGAAATGAACGAAGGCTCACAGTTCATGATCTTCCTGCCCAGACAAGACGGCAACAACGCTGCCTTCTCCGCCTTCCTCACGTTCTGGTCCTACGTCATCATCCTCAACACCGTGGTGCCCATCTCTCTCTATGTTAGTGTGGAGATCATTCGGCTGGGGAACAGCTTCTACATCGACTGGgacaggaaaatgtactttgcACGGTACGACACCCCCGCCGAGGCTCGCACCACCACGCTAAACGAGGAGCTCGGCCAGATCAAGTACATCTTCAGTGACAAAACAGGGACGCTCACCCAGAATATCATGACTTTCAACAAGTGCTCCATCAATGGCAAATCTTACGgggaTGTTTATGACTACACAGGTCAAAGACTAGAAATTACTGAGCATACAGAGACGGTGGACTTCTCCTTCAACCCGCTGGCCGACCCCCGCTTCATGTTCCACGACCACGCCCTGGTGGAGGCGGTGAAGCTGGAGGACCCAGAGGTGCACGCCTTCTTCAGACTGTTGGCCCTCTGCCACACCGTCATGGCCGAGGAGAAGAAAGAAGGTGAGCTTTTCTATCAGGCCCAGTCTCCAGATGAGGGAGCACTGGTAACAGCGGCCCGAAACTTTGGATTTGTCTTCCGCTCGCGCACACCAGACAGCGTTTCCATCGTGGAAATGGGGGAACAGCGCAGCTATGAACTCCTGGCCATCTTGGATTTCAACAACGTCCGCAAGAGAATGTCCGTCATAGTTCGGAGTCCAGAGGGGAAGCTCTGTCTCTACTGTAAAGGTGCAGACACAATCATCTATGAGAGGCTGCATCAGTCCTGCAGCAAGCTGATGGACGTCACTACAGAGCACCTTAATGAGTTTGCAGGGGAGGGCCTGCGGACTCTGGCGCTGGCCTATAAGAATCTGGATGAGGAGTATTTCAACCAGTGGAAACAGCGCCACCATGAGGCCAGCACCGAGCTTGACAACCAAGAGAGCAAACTGGACGAGCTGTACGAGGAGATAGAGAAGGATCTGCTGCTGCTTGGAGCAACAGCCATAGAAGACAAGTTACAAGACGGAGTACCTCAGACTATTGAGCAGTTGTCCAAAGCCAACATCAAAATCTGGGTTTTGACTGGTGACAAGCAAGAAACTGCAGAAAACATTGGGTACTCGTGCAACTTACTGCGGGAGGAGATGAACGACGTCTTTATCGTCTCGGGCAACTCACCTGAGGATGTCAGACAGGAACTCAGAAATGCACGGACCTCCATGAAACCAGTTGAGGATTCAATGTTTCTGCCAGAAAGGACTCTGGGTAAAGGTGTGAAAGTGATCGCAGACGAGTTGGTAAATGGAGAGTACGGCCTGGTCATCAACGGACACAGCCTGGCGTACGCCCTGGAGGGCAGCATGGAGCTGGAGTTCCTGAGGACGGCGTGTATGTGTAAAGCAGTGATCTGCTGCCGGGTCACTCCTCTGCAGAAGGCTCAGGTGGTCGAGCTGGTCAAGAAGTACAAGCAGGCGGTCACACTGGCCATAGGAGATGGAGCCAACGACGTCAGCATGATCAAAGCTGCTCATATAGGCGTGGGCATCTCAGGCCAGGAGGGCATGCAGGCTGTGCTGTCCAGCGACTACTCCTTCGCCCAGTTCCGCTTCCTGCAGCGCCTCCTGCTGGTGCACGGCCGCTGGTCCTACCTGCGCATGTGCAAGTTCCTGCGCTACTTCTTCTACAAGAACTTCACCTTCACCTTCGTCCACTTCTGGTACGGCTTCTTCTGCGGCTTCTCTGCACAGACGGTGTATGATGAGTGGTTCATAACACTCTACAATCTGGTGTACACAGCACTACCTGTCCTGGGAATGAGTCTGTTTGATCAGGATGTGAACGACGTGTGGAGTTTCCAGCATCCTCAGCTCTACATTCCCGGTCAACTCAACCTATACTTCAGCAAGAAGGCCTTCTTCAACTGTGCTCTCCACAGCTGCTACAGCTCCATGGTGCTCTTCTTCATCCCTTACGCAGCCATGCACAACACCGTGAGGGACGACGGGAAGGACGTTGCCGACTACCAGTCCTTCGCTCTCCTCACCCAGACGTGTCTGCTGTTTGCCGTCACCATCCAGTTAGGGTTGGAGATGTCCTACTGGACAGCGGTGAACACTTTCTTCGTGATGGGCAGCCTGGCCATGTACTTTGCCGTCACGTTCACCATGTACAGCAACGGCATGTTTCTCTTGTTGCCGTCAGCCTTCCCTTTCTTAGgAACAGCCCGTAACTCTCTGAACCAGCCCAACATTTGGCTGACGATCCTCCTCACCTCCATCCTGTGTGTCCTTCCTGTGGTTACCTACCGCTTCCTGTTAATTCAGCTCTGCCCCACCATCAATGACAAGGTGATGTTCAAGGTAAGACGGGCCAAAGCAACACCGGCCCCCCCGCCTCTACGCACCCGCATCCGCCGCACCAGCTCCCGTCGCTCAGGCTACGCCTTCTCGCACGCGCAGGGCTACGGGCACCTGGTGACTTCGGGACGGTTCTTGCGGCGTCCTGCTTTGTCGGCATCTTCAGGTTTCGCCAACATAGGTCGCACCACAACTGGGTTCAGTCCCATGGGACGATCGGCTGGATACAGCCCGACAGGACGCCCCCAGAACGCCAAGGTCCCAGATGTGGAGGTGACGTCGCTGCAGATGTACAGGACTATCAGAGATCCTGTCTTCTGACGGACAGCTGGTTATCTTCAAGATGGAACATCTGGGAGAAGGAATAATGCAAGCTAAACAGCTGGATGCCCCTGGTGCTTTTAAGCTCCCATTTGTTACCATGAGGAACTTGCTTGGGctttccagagagagagagagagtcaaggATTTTAACGAAAATCTGTCCAATCACCTAAAAGTGCACGACTTTTGCTCCAAGCATTTCATTTTGTAAAAGTTTTATCAAAGGGAACTACAGCAAAATGTGTCGCCACTTCTGATGGGTACATGGATCACTTTCCTCAGATCATGAGTATTCATGTAAAACATGCCTCATGCAGAGCTAACAGATGAACTCTTTCTGACACAAAAACCAGTAACAGGGTGATTCACTTTCAGACTGGAACAACCACAGAGGGGAAACATTTTGGCTTCATGAGAAGGACAAAGTGTCATCATGTTTACAGACTACCACGATTTCCTTAACCCTGGGAGTCTAGATGCACAGCAGGATACAACCAGCAAAGCCATTTTGCATAAGAATATTTaaattttgtactttttaagcTTTAAGCTGTTAGCCCTTTGGCAGCATCACATGGCAGCGGGGGATAACTTAATGTCTGGAAGATCATGAATGTTTCAAAAAGTGCTCCCAACAAATGTTCATCTTCTCAGAGGAAGAGATGTTATGGCAAGCATTGTTGGTCAATCCAGCATTTGTtggaaatgtttctttttacagtatgtatttttcatcactttatgTGTGCTGAAAGAATTTCATGCTACTTAAATGAATTTAGGAGAAGAAAACAGATCATTTTTGTGTAGCAGACCCTATTTTTGATTTACAGCTAAACCACAGGGACATTTAAATTACAATCTAAAGGACCACTGTGTAATCGGACATACTTTATACTTAAAGGGTTTATGAGTTTTAAGTAATAATTTTATTATTGgttagaataaataaataaatgaaatataatTGCTTTACAGATAAGAAAAAAGCTATTAATAAGAACAGTGTTTGGACTGGACTGCCAGgttgtaaaaatgtatataactttctctgtcttttcagATAACTCCTCTGTGCAGCTTGACAGGTTATTCTGAAGTGAGAAACCTAAAAAGTCTTTATTTATAACATCAGCCCTGATGGCTAATTAGGAGTCATAAAGGTCATTTCTTTACAGATACAATTAATAGtaagtaataaataaaacagttcTTATACTTTAGTAATCCGTCAAGTATGGCGTTTAATAATTTATTCTTAAGTGCACTgctattaataatattaaaactATTTATTATAGTAGTTTAAATGAAATTTGTCGTTAAAAGAGAGATAATGGTGCCGGGCCCCAAAAAAaggataataataaaataaataattgtaattatAAAGTTCTTGATAAATGGATTTTGGTCTGTAAGATCTGCAGTTCTGCATGTGATTAAACTGATGGATTAGTCTTCCTGtatgataaataaatgaaagcaTGTGAAAAGATGGAGAAAGTTATGCTGCTGGAGGATATACAGTACACCATCCATCAGCCATACCAACTCATCCTGTGTAGGGTCGCTGGGGAGcatatcccagcatgcactgggcgGGTTCACCCTGGGCAGTTTCACACTCACACCTACGAGTGAATTTAGAGTCCCCAATCAACACGACtttctttggcttttatttttttacaatctGGCAACGTAAAAGTTGCTCCTGATTGATTCCTGATCTGAACAATTTATAAAGAATGCCTTATTACAAAGTGGTACCAACATTTTCTACAGTGCATCTTTATGCATTGTAGTGTAATGTACCTCAGTGTTATGGTCTTGGGTTTACATTTTGAGTTGTTTTCCAACTCTAGCAACTGAGAATCTAAGGCCCTGTTTAAGCCTACTGTGTAGCCCAGGGATATAACCAGATCATGTCTAGATCCAGTTTAGAGGGATAGTAGTTCAAATATGTGTACCAGAATGTGTCTTAAATGCTCCTTGAGTGACCACTTGAGACAAAATTCAGCATCCCTACCGATAAATAtggaaaactgcacattttcacCTCATCAAACAGCATGAGAAGTGGGCTACGCCGACCGTACAGACGTTAAAGATTGTCTGAGTTGTTGCTGTAGAAAAATCAGCCACATCTACCTGTGTTTGGGAGATTTATTGTACTGTACAGACACTACACAGTTGACTGGGTGATCCTATAATCCATTCCTTTTAGTGCTGAGTGTGGGCAGAGCCTAAAAAACACTGCTTAGACAATTCCCATGAACTTTTAATCTTGCAGAACATAAATCATAATGATTTTATACCCTATTTTAAAAGCAGATACTGTATCACATCGTGCATAGTCATTATTTCAAAATCATGTATTTGCTTTAGCAACAAGCTTGCTGCTTTACGTCTGACAATCAACTTGGTAGTTAGCTGTATTTCTAATTTTAATAAGTAGTGTATCTTATCTTGTTTCCaacatctttctctctttagTTCACTGAAAATATGAGCTAGCGTAGAAGGACACACAGAAGCTGCCTTAatattaaagaaaacaaaagtccTATGTTATGCAATGCAGAGACAACAGTGACAAGAATGTTTGATGGAAGATAAGgatgttacaaaaaaaatgtaagttaaGCACACATATTATTCCATACaggtgttatttttttaaatgttgtgtttcttGTTTCAACCTGAAGATGATAGCTGGTCCGTGGGATcaatcattcatttattctttGGTGTGTGACGGTATAAagaatgggccaaaatgtaaTTCATTTTATAATTAAGCAATAATgctattttaatgtttaatagttCCCTATATTCTTTCTTTTCCGTGCCTTGAGGTATACTTGGATGTGCAATTAGTGGTTTAATTCACTCATCAGTTTTTCATCTACGGTTCAATTTAAACCATTAACACGGCTGATGGATGCCTTGACATTATAAACTGTGGTGTTTTTATCTGAACGTCTGTCACCACAATGAGATTCAGTGAGTTGTTGCCCAGAATTGAATGTACTAGCCCACTAAGCCTGGTGGTGAaccaaagatatttttttcaaggttttgcGTGTCATAGTTCACTCTAAAGTGAAAAGGTTGCTCATCAAACAGAATCTGATGCTGGAGGTCAGTGTGATGAAGCTGGTTTGCACCACTGACAACTTACTTATTACTTACAAGTGTTTTTTATGGAATAATGTAAAAGTTTGAATATGCAGAAGAGCCATTTATTACTGTTGCTGTAATTGAATCTTTGTCCAGTTGTGTGTAAATCAAGCTCAAAATCaagttttgttgtgtgttttcagtgttttgaGGAAGGATCTGGTAATCCAGTTGTTAGATCTTTGTTAGATGTCCGATGTTACCAATTTGATCGTAGCGGGGTCCGTTTCACAGAAGCAATCTGTAAGCCGTGCTTACTTACAGATCACAGATGGTGAATGAAAACTTTATATTTATCAGTATATCATATATCTTTTGCACTGAAGACAGAAACTGTAACATAAGGgatttttgataactttttCTCAAACGTGGCAAAAGTATTCAGTGATTTTTGCTCTACTCTTACTGATAAGCATTTTGTATCATTTTgtactaaaaaataaatgttactgCAATACAATTAC

Function

NR:

description
PREDICTED: LOW QUALITY PROTEIN: probable phospholipid-transporting ATPase ID

GO:

id name namespace
GO:0034220 ion transmembrane transport biological_process
GO:0006200 obsolete ATP catabolic process biological_process
GO:0006812 cation transport biological_process
GO:0045332 phospholipid translocation biological_process
GO:0016021 integral component of membrane cellular_component
GO:0005524 ATP binding molecular_function
GO:0019829 ATPase-coupled cation transmembrane transporter activity molecular_function
GO:0000287 magnesium ion binding molecular_function

KEGG:

id description
K01530 E7.6.2.1; phospholipid-translocating ATPase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039803521.1 True 7494 mRNA 0.45 28 31513308 31565163

Neighbor

gene id symbol gene type direction distance location
LOC120560109 NA coding upstream 23782 31485063 ~ 31489526 (+)
LOC120561065 NA coding upstream 51864 31456500 ~ 31461444 (+)
LOC120560681 LOC108242800,LOC106510782,LOC101474983 coding upstream 196886 31315299 ~ 31316422 (+)
hs3st1l2 LOC102790965,LOC100694141,LOC103362344,LOC102206456,LOC102298111 coding upstream 212863 31273898 ~ 31300445 (+)
LOC120559964 NA coding upstream 272268 31237268 ~ 31241040 (+)
dapk1 dapk1 coding downstream 4879 31570042 ~ 31660267 (+)
ctsla LOC104932682 coding downstream 105362 31670525 ~ 31675115 (+)
kank1a kank1 coding downstream 134363 31699526 ~ 31757504 (+)
dmrt1 NA coding downstream 205129 31770292 ~ 31802453 (+)
dmrt2a dmrt2 coding downstream 255506 31820669 ~ 31825718 (+)
G66117 NA non-coding upstream 2952 31461798 ~ 31510356 (+)
LOC120560111 LOC108434293 non-coding upstream 28307 31478501 ~ 31485001 (+)
G66107 NA non-coding upstream 95048 31409955 ~ 31418260 (+)
G66092 LOC103362337,LOC101472255,LOC102204493,LOC102311726,LOC100707713 non-coding upstream 104152 31351198 ~ 31409156 (+)
G66069 NA non-coding upstream 194834 31317576 ~ 31318474 (+)
LOC120561307 NA non-coding downstream 194025 31759188 ~ 31763773 (+)
G66253 NA non-coding downstream 683838 32249001 ~ 32249240 (+)
G66255 NA non-coding downstream 725609 32290772 ~ 32291019 (+)
G66294 NA non-coding downstream 906022 32471185 ~ 32474048 (+)
G66295 NA non-coding downstream 909324 32474487 ~ 32475080 (+)
LOC120561064 NA other upstream 620028 30857580 ~ 30893280 (+)
G65899 taok3 other upstream 935149 30574086 ~ 30578159 (+)
LOC120560820 NA other upstream 1261789 30246887 ~ 30251519 (+)
fbxo21 fbxo21 other upstream 1301200 30186848 ~ 30212108 (+)
ubac1 ubac1 other upstream 2161552 29344580 ~ 29351756 (+)
dmrt3a dmrt3 other downstream 242632 31807795 ~ 31811553 (+)
adamts3 adamts3,LOC100699019,LOC101479253,LOC102313231 other downstream 467413 32032576 ~ 32209534 (+)
G66231 NA other downstream 561130 32126293 ~ 32136966 (+)
G66256 slc4a5,LOC102211952,LOC101484802 other downstream 757344 32322507 ~ 32329990 (+)
G66263 LOC106536102 other downstream 799697 32364860 ~ 32369984 (+)

Expression


Co-expression Network