hdr


Basic Information

Item Value
gene id hdr
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 10089296 ~ 10110469 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039803587.1
CCAGCCGAAGTACGTCATTACGCACACCTGCGCTAGACTTTGGGACAGTAGCATATAAAACGCCTGTCAAAGCGCTTTGCCGCAAATGGAACTTTGGAAATGACTCCCTATAATTCTGTGGATTTAGACATCGCTACTAAAGCATGACACAATTTCTACAATACATGGCTTTTTTGACATTGATCTGGCACCTCAAACCCATGGGGGCATATCCGCGGTCTGGCCTTGACTTGGTAGGCAACCGGACCAGGCGGGACGTCTCCTGCAAACCCGACCTGGAGTACCTGGATGGAAACATCTGCTGTTTATACTGTCCAGCTGgtACACGTAAGATATCGCCCTGCACCAGAGCAGGAGAGAAGGGGAAGTGTGAGGAATGCGACGATGGGACATACACTGAGCACGCTAACGAACTGCAGCTGTGTTGGAAGTGCACACGGTGTCGCTCAGATCAGGAAGTTGTAAGGCCATGTACTCCCACTCAAGATACTGAATGTCAGTGCAAATTGGGAAGATTTTGTGCTCCTGACCAACCATGTGAGATATGCAAGACGTGTTCAAGGTGTGAAGAAGATGAAGGGATGGAGAGGAGCTGCACCTCTACTTCCAACACAGAGTGCAAGAAAATCCAGACCAATGCTGCCTCTGCCTCAGcaaaGGCCTCTGTGATTGTGCCACTTGTACTGATTGCTGCTGTGGTTATTGGTGCGATAATCATTGCTGTGTGCACAAGGAGACATCGTAAAGCAACAGACACTCAGAGAAATGTACCTGATGGGCTAAAAGCTGGACTGGAAAGGAGCAACGGAGAAACCCCAGGGCAGAGCTGCTCGAATCTGATCCTGTCCCGGCAACTGGTGAGAGCCAAATCCTCGGCCGGCATTGAGGAAGAGCGCAAAGTGCTATGTGAAAGCCTCTGCAGCAGCTCAGCCAGTAACTCCCAGCACAGTCTAACTGGCCTGCCCTGCTCTGCCTTCCCCGCATATCTCCCGCCAGCCTGTCCCATGGTCCCCACACAGCCCGACAGCAGGGAAGATAAGCAATTTCCTAAGCTTGTTCCTGTGAATGGTGAAGAGTCTTTGAGGAAATGCTTTGAGTATTTTGAAGAAATGGACTTCTACTACCACAAGAGATTCTTCCGGCACATTGGGATAATGGACAATGTAATCAAAAGCAAAGACCACCTTCTCTATGATGACAAGATCCATGAATTGCTGAATATTTGGGTGGAGAAAGAGGGCAAAGAAGCCACCTTAAATGACCTGCTAAAAGCATTGCTTGATTTAAATCAAAGGCGAACAGCTGAGACTGTCAAGGAAAATGCTGTTCTCAATGGTCATTACTTTTGTGATAATGAGAGGTGAATTGTTCAAGAAAACCCCTTGCAAACAGCACTCCAGATGAAGAAGATGACCTCTAACCTGTTACCTGAAATGTGCCATGAAAAACTCATGGTGTGAGGTCCTTGTTGGAGTAGGCTTGAGTATTGTACATATTGTCCAATAAGCACCTCAGAAGGCTACCTCCTGTCCATAGTAGTCTTACACTTACAATGTGAATATTTTACTGAAGCTGCtgctacttcaggtaatgcagGGCCTTGTTTAGTGGCTTAATTACAGGCATGCTTGGCCTTACACACACTCCAAAATGAGCTAGaattcagttttcttttttctgactTTCCTTAGCTCTACATGCAGTGTTGATAATGGGAGTATTTAATTACAAGAAGTGTCTTGTTTATCAGTgtgtaaaacttttttttttttacttaaaattaGACCAAATCTTAAGACTGCTTGATTGTTTCACATAGTGAATGTGATGTTCATCAGACCTTAGGAATGAATGTCTTAATGGCCGCACTGATTGAGCAATGGAA
>XM_039803588.1
GATAGGCTGCTGGGTGCGGTACCGCCCAGCCGAAGTACGTCATTACGCACACCTGCGCTAGACTTTGGGACAGTAGCATATAAAACGCCTGTCAAAGCGCTTTGCCGCAAATGGAACTTTGGAAATGACTCCCTATAATTCTGTGGATTTAGACATCGCTACTAAAGCATGACACAATTTCTACAATACATGGCTTTTTTGACATTGATCTGGCACCTCAAACCCATGGGGGCATATCCGCGGTCTGGCCTTGACTTGGTAGGCAACCGGACCAGGCGGGACGTCTCCTGCAAACCCGACCTGGAGTACCTGGATGGAAACATCTGCTGTTTATACTGTCCAGCTGgtACACGTAAGATATCGCCCTGCACCAGAGCAGGAGAGAAGGGGAAGTGTGAGGAATGCGACGATGGGACATACACTGAGCACGCTAACGAACTGCAGCTGTGTTGGAAGTGCACACGGTGTCGCTCAGATCAGGAAGTTGTAAGGCCATGTACTCCCACTCAAGATACTGAATGTCAGTGCAAATTGGGAAGATTTTGTGCTCCTGACCAACCATGTGAGATATGCAAGACGTGTTCAAGGTGTGAAGAAGATGAAGGGATGGAGAGGAGCTGCACCTCTACTTCCAACACAGAGTGCAAGAAAATCCAGACCAATGCTGCCTCTGCCTCAGACACTCAGAGAAATGTACCTGATGGGCTAAAAGCTGGACTGGAAAGGAGCAACGGAGAAACCCCAGGGCAGAGCTGCTCGAATCTGATCCTGTCCCGGCAACTGGTGAGAGCCAAATCCTCGGCCGGCATTGAGGAAGAGCGCAAAGTGCTATGTGAAAGCCTCTGCAGCAGCTCAGCCAGTAACTCCCAGCACAGTCTAACTGGCCTGCCCTGCTCTGCCTTCCCCGCATATCTCCCGCCAGCCTGTCCCATGGTCCCCACACAGCCCGACAGCAGGGAAGATAAGCAATTTCCTAAGCTTGTTCCTGTGAATGGTGAAGAGTCTTTGAGGAAATGCTTTGAGTATTTTGAAGAAATGGACTTCTACTACCACAAGAGATTCTTCCGGCACATTGGGATAATGGACAATGTAATCAAAAGCAAAGACCACCTTCTCTATGATGACAAGATCCATGAATTGCTGAATATTTGGGTGGAGAAAGAGGGCAAAGAAGCCACCTTAAATGACCTGCTAAAAGCATTGCTTGATTTAAATCAAAGGCGAACAGCTGAGACTGTCAAGGAAAATGCTGTTCTCAATGGTCATTACTTTTGTGATAATGAGAGGTGAATTGTTCAAGAAAACCCCTTGCAAACAGCACTCCAGATGAAGAAGATGACCTCTAACCTGTTACCTGAAATGTGCCATGAAAAACTCATGGTGTGAGGTCCTTGTTGGAGTAGGCTTGAGTATTGTACATATTGTCCAATAAGCACCTCAGAAGGCTACCTCCTGTCCATAGTAGTCTTACACTTACAATGTGAATATTTTACTGAAGCTGCtgctacttcaggtaatgcagGGCCTTGTTTAGTGGCTTAATTACAGGCATGCTTGGCCTTACACACACTCCAAAATGAGCTAGaattcagttttcttttttctgactTTCCTTAGCTCTACATGCAGTGTTGATAATGGGAGTATTTAATTACAAGAAGTGTCTTGTTTATCAGTgtgtaaaacttttttttttttacttaaaattaGACCAAATCTTAAGACTGCTTGATTGTTTCACATAGTGAATGTGATGTTCATCAGACCTTAGGAATGAATGTCTTAATGGCCGCACTGATTGAGCAATGGAA
>XM_039803589.1
AGCCGAAGTACGTCATTACGCACACCTGCGCTAGACTTTGGGACAGTAGCATATAAAACGCCTGTCAAAGCGCTTTGCCGCAAATGGAACTTTGGAAATGACTCCCTATAATTCTGTGGATTTAGACATCGCTACTAAAGCATGACACAATTTCTACAATACATGGCTTTTTTGACATTGATCTGGCACCTCAAACCCATGGGGGCATATCCGCGGTCTGGCCTTGACTTGGTAGGCAACCGGACCAGGCGGGACGTCTCCTGCAAACCCGACCTGGAGTACCTGGATGGAAACATCTGCTGTTTATACTGTCCAGCTGgtACACGTAAGATATCGCCCTGCACCAGAGCAGGAGAGAAGGGGAAGTGTGAGGAATGCGACGATGGGACATACACTGAGCACGCTAACGAACTGCAGCTGTGTTGGAAGTGCACACGGTGTCGCTCAGATCAGGAAGTTGTAAGGCCATGTACTCCCACTCAAGATACTGAATGTCAGTGCAAATTGGGAAGATTTTGTGCTCCTGACCAACCATGTGAGATATGCAAGACGTGTTCAAGGTGTGAAGAAGATGAAGGGATGGAGAGGAGCTGCACCTCTACTTCCAACACAGAGTGCAAGAAAATCCAGACCAATGCTGCCTCTGCCTCAGcaaaGGCCTCTGTGATTGTGCCACTTGTACTGATTGCTGCTGTGGTTATTGGTGCGATAATCATTGCTGTGTGCACAAGGAGACATCGTAAAGCAACAGACACTCAGAGAAATGTACCTGATGGGCTAAAAGCTGGACTGGAAAGGAGCAACGGAGAAACCCCAGGGCAGAGCTGCTCGAATCTGATCCTGTCCCGGCAACTGGAAGATAAGCAATTTCCTAAGCTTGTTCCTGTGAATGGTGAAGAGTCTTTGAGGAAATGCTTTGAGTATTTTGAAGAAATGGACTTCTACTACCACAAGAGATTCTTCCGGCACATTGGGATAATGGACAATGTAATCAAAAGCAAAGACCACCTTCTCTATGATGACAAGATCCATGAATTGCTGAATATTTGGGTGGAGAAAGAGGGCAAAGAAGCCACCTTAAATGACCTGCTAAAAGCATTGCTTGATTTAAATCAAAGGCGAACAGCTGAGACTGTCAAGGAAAATGCTGTTCTCAATGGTCATTACTTTTGTGATAATGAGAGGTGAATTGTTCAAGAAAACCCCTTGCAAACAGCACTCCAGATGAAGAAGATGACCTCTAACCTGTTACCTGAAATGTGCCATGAAAAACTCATGGTGTGAGGTCCTTGTTGGAGTAGGCTTGAGTATTGTACATATTGTCCAATAAGCACCTCAGAAGGCTACCTCCTGTCCATAGTAGTCTTACACTTACAATGTGAATATTTTACTGAAGCTGCtgctacttcaggtaatgcagGGCCTTGTTTAGTGGCTTAATTACAGGCATGCTTGGCCTTACACACACTCCAAAATGAGCTAGaattcagttttcttttttctgactTTCCTTAGCTCTACATGCAGTGTTGATAATGGGAGTATTTAATTACAAGAAGTGTCTTGTTTATCAGTgtgtaaaacttttttttttttacttaaaattaGACCAAATCTTAAGACTGCTTGATTGTTTCACATAGTGAATGTGATGTTCATCAGACCTTAGGAATGAATGTCTTAATGGCCGCACTGATTGAGCAATGGAA
>XM_039803591.1
CTGGGTGCGGTACCGCCCAGCCGAAGTACGTCATTACGCACACCTGCGCTAGACTTTGGGACAGTAGCATATAAAACGCCTGTCAAAGCGCTTTGCCGCAAATGGAACTTTGGAAATGACTCCCTATAATTCTGTGGATTTAGACATCGCTACTAAAGCATGACACAATTTCTACAATACATGGCTTTTTTGACATTGATCTGGCACCTCAAACCCATGGGGGCATATCCGCGGTCTGGCCTTGACTTGGTAGGCAACCGGACCAGGCGGGACGTCTCCTGCAAACCCGACCTGGAGTACCTGGATGGAAACATCTGCTGTTTATACTGTCCAGCTGgtACACGTAAGATATCGCCCTGCACCAGAGCAGGAGAGAAGGGGAAGTGTGAGGAATGCGACGATGGGACATACACTGAGCACGCTAACGAACTGCAGCTGTGTTGGAAGTGCACACGGTGTCGCTCAGATCAGGAAGTTGTAAGGCCATGTACTCCCACTCAAGATACTGAATGTCAGTGCAAATTGGGAAGATTTTGTGCTCCTGACCAACCATGTGAGATATGCAAGACGTGTTCAAGGTGTGAAGAAGATGAAGGGATGGAGAGGAGCTGCACCTCTACTTCCAACACAGAGTGCAAGAAAATCCAGACCAATGCTGCCTCTGCCTCAGACACTCAGAGAAATGTACCTGATGGGCTAAAAGCTGGACTGGAAAGGAGCAACGGAGAAACCCCAGGGCAGAGCTGCTCGAATCTGATCCTGTCCCGGCAACTGGAAGATAAGCAATTTCCTAAGCTTGTTCCTGTGAATGGTGAAGAGTCTTTGAGGAAATGCTTTGAGTATTTTGAAGAAATGGACTTCTACTACCACAAGAGATTCTTCCGGCACATTGGGATAATGGACAATGTAATCAAAAGCAAAGACCACCTTCTCTATGATGACAAGATCCATGAATTGCTGAATATTTGGGTGGAGAAAGAGGGCAAAGAAGCCACCTTAAATGACCTGCTAAAAGCATTGCTTGATTTAAATCAAAGGCGAACAGCTGAGACTGTCAAGGAAAATGCTGTTCTCAATGGTCATTACTTTTGTGATAATGAGAGGTGAATTGTTCAAGAAAACCCCTTGCAAACAGCACTCCAGATGAAGAAGATGACCTCTAACCTGTTACCTGAAATGTGCCATGAAAAACTCATGGTGTGAGGTCCTTGTTGGAGTAGGCTTGAGTATTGTACATATTGTCCAATAAGCACCTCAGAAGGCTACCTCCTGTCCATAGTAGTCTTACACTTACAATGTGAATATTTTACTGAAGCTGCtgctacttcaggtaatgcagGGCCTTGTTTAGTGGCTTAATTACAGGCATGCTTGGCCTTACACACACTCCAAAATGAGCTAGaattcagttttcttttttctgactTTCCTTAGCTCTACATGCAGTGTTGATAATGGGAGTATTTAATTACAAGAAGTGTCTTGTTTATCAGTgtgtaaaacttttttttttttacttaaaattaGACCAAATCTTAAGACTGCTTGATTGTTTCACATAGTGAATGTGATGTTCATCAGACCTTAGGAATGAATGTCTTAATGGCCGCACTGATTGAGCAATGGAA

Function

NR:

description
tumor necrosis factor receptor superfamily member 6-like isoform X2

GO:

id name namespace
GO:0019825 oxygen binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039803587.1 True 1885 mRNA 0.46 10 10089296 10110444
XM_039803588.1 False 1811 mRNA 0.46 9 10089296 10110469
XM_039803589.1 False 1709 mRNA 0.44 10 10089296 10110442
XM_039803591.1 False 1628 mRNA 0.44 9 10089296 10110460

Neighbor

gene id symbol gene type direction distance location
LOC120559983 LOC104937676 coding downstream 14093 10069711 ~ 10075203 (-)
loxl2b loxl2,LOC104937675 coding downstream 35999 9996041 ~ 10053297 (-)
sfrp1a sfrp1,LOC104937559 coding downstream 200763 9875316 ~ 9888533 (-)
zmat4a zmat4 coding downstream 318743 9493008 ~ 9770553 (-)
adam28 LOC104934812,LOC103353809 coding downstream 991200 9059114 ~ 9098096 (-)
tm2d2 tm2d2 coding upstream 526579 10637048 ~ 10704693 (-)
ppm1f ppm1f coding upstream 697362 10807831 ~ 10968204 (-)
top3b top3b coding upstream 875636 10986105 ~ 11091962 (-)
sdf2l1 sdf2l1,LOC106531766,LOC106570867 coding upstream 1049980 11160449 ~ 11169327 (-)
LOC120561251 NA coding upstream 1241385 11351854 ~ 11354906 (-)
G60432 NA non-coding downstream 163776 9925317 ~ 9925520 (-)
G60429 NA non-coding downstream 169625 9919299 ~ 9919671 (-)
G60428 NA non-coding downstream 170583 9918414 ~ 9918713 (-)
G60424 NA non-coding downstream 174046 9915000 ~ 9915250 (-)
G60418 NA non-coding downstream 264576 9823967 ~ 9824720 (-)
G60504 NA non-coding upstream 264928 10375397 ~ 10378932 (-)
G60506 NA non-coding upstream 414680 10525149 ~ 10525403 (-)
G60511 NA non-coding upstream 432802 10543271 ~ 10543731 (-)
G60513 NA non-coding upstream 434162 10544631 ~ 10544942 (-)
G60515 NA non-coding upstream 435255 10545724 ~ 10546993 (-)
tacr1a tacr1,LOC102799894,LOC100703444,LOC102196095 other downstream 1361853 8643403 ~ 8727443 (-)
G60145 NA other downstream 1686730 8401022 ~ 8402566 (-)
anapc7 anapc7 other downstream 2201871 7877399 ~ 7887425 (-)
specc1la specc1l other downstream 2323284 7727560 ~ 7766012 (-)
G59881 NA other downstream 2504777 7584086 ~ 7584519 (-)
unc5db unc5d other upstream 11683 10122152 ~ 10518967 (-)
G60715 NA other upstream 1078673 11189142 ~ 11189741 (-)
abca2 abca2 other upstream 1174916 11285385 ~ 11593660 (-)
LOC120561001 whrn,LOC102797690 other upstream 1791181 11901650 ~ 12061646 (-)
LOC120561038 LOC102778062,LOC101486272,LOC102199534,LOC108245630 other upstream 2183238 12293707 ~ 12555285 (-)

Expression


Co-expression Network