LOC120560836 (LOC103398011,LOC102234551,LOC103373450,LOC107386141,LOC101064581)


Basic Information

Item Value
gene id LOC120560836
gene name LOC103398011,LOC102234551,LOC103373450,LOC107386141,LOC101064581
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 15309058 ~ 15317062 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039803709.1
CGGTGTTTCGCCGCATGATCGCTGAAGAAGAAGAATCGCGGAAGAAGGGAAAGGTTTCCTGACGGATCACCGGGCTAACCAGCTAACAAAGATAACTACCCGTCTTATCGGCAATTTAATCAGGTATACCGGTTAGATAGACACCCGGACCGAAGTATCAAGATGACAGCCGCACCTTACAACTACTCCTACATCTTCAAATACATCATCATCGgtGATATGGGAGTAGGGAAGTCCTGTCTGCTGCACCAGTTCACAGAGAAAAAATTCATGGCGGACTGTCCTCACACCATCGGGGTGGAGTTTGGGACGAGGATCATGGAGGTTAACGGTCAGAAAGTGAAGCTGCAGATCTGGGACACAGCCGGTCAGGAGCGCTTCAGGGCTGTCACCAGGTCCTATTACAGAGGGGCTGCCGGGGCCCTCATGGTGTACGACATCACcagGAGAAGTACTTATAATCACTTGAGCAGCTGGTTAACAGATGCCAGGAACCTGACCAACCCAAACACAGTGATCATTCTGATTGGTAACAAGGGCGACCTGGAGGCTCAGAGAGACGTGACGTACGAGGAGGCCAAACAGTTTGCGGAGGAGAATGGTTTGCTGTTTCTAGAGGCCAGCGCTAAGACAGGGGAGAATGTGGAAGAGGCCTTCCTGGAAGCGGCAAAGAGAATTTACCAGAACATCCAAGATGGCAGTCTGGACCTGAACGCTGCCGAGTCAGGAGTCCAGCATAAACCGTCTGCACCACAGGGAGGTCGCCTCAACGCCGACAGCCAGCCGGCCAAAGAAGGCTGCAGCTGCTAACCACAGACCCATCAGacagacggacggacggacagaAGCAGACAGATAACGTACACAGAGATCCACCAGGCACTAACATGCATCTTCTATCCAGAGTGCGTCAAACAGGATTTAGCTGGATTACATTTAACAGTCCAACCAACTGTTGTCAAATCCAGACCTCAGTTCAATACCCAAAACAAGATTCAACCATCCTCCACCCAATCAGATATTTACCAGCTTTGGTTAAATCAGGACACCTGCTACCAAATCCAGAAACTATCCAGATGTATATGTGCCACCTCTGGATCAGTGTTGGTCAACTTCCAAATCAGGACCACCCTAGACCTTAGCTGGATCACTGTTTGCACAAATTGAATCCCTAAGCATAAATCCCGGCCACTCTTGGTCCACACTTGGATCATGCTAGGTCTCATTCCAGCTTAGTCACTATGCCCATCGCCAGGCAAACCTTTCCCCAAAACTGGATGACCCTCTGGACCTTCCAAGATTAAAGTGCTGTTGGCCTGACTCAAGTGAAGGTTGTCCAATTTAGGACTACTCTGGTCACACTTgataacaatttattcattattattagtTAACAAATAAAGATACAAGACTCAAATTTGAATCAACCTACAGCCCAAATCTGATCTACACTTGCAGATCACCAAAATGCAGATCACCCAAAAAAACGTACACTTAAACTTTTGACATTTAGATTAGCCTCGACTCTTCTTGGTTCCAATTGAGGCCGCCTTCACCCCACATCCAGGCTGGCTTGGCCCAAAGGTAGGCCAAACTGGACTGTTGTAAGCTCAGAATAGCACCACCCTTAGCCCACCAACCGAAAACCATTTTCCCCAAGACTGAACCCAACTCAAGTGAGGGTATTCAAACTACTTTTGTCCCATATGTTAAACACCAATGAGACAGATAAAGATTCAATGCTTAAATTCGGACAAAAAAACGGATCACCCAAGTCTCAACTCCAGACATTCCTATGGACAGATTCAAAGCCTTGGCTCAAGCCAGACTGCTTACTGGTCCAAATCGAGGACCACCTCTAGTccaaatattcatatttagcTTTAATCTGATCTGCTATAAATCCAGATCGTCCAAACGCCCAACTCTGGCGTTCATGCTTTGATATAAACGTTGGGATTAATAGTCGTACTTATGTCTTATGTGTGTGGTATCCCATCATTTGTTGTTCAGTTGGAAAAGTCTTAAAAATTCATGCTTCAAATCCATTAATTCTAACCGAGTGGCCTGGACTCTCCTCATATCACTTGTTTCCAAACAGCTGCCCTTCGAGCTGACCCGTTGCATTTACACAGTGTCGGTAATGTGGATCCGAAGATGCATTTACACTGTAGTTGATGATGTGGATTGGAGACTTTTGAATTGAGTTGTTCTGTTGGAGTTCCAGCAATATTCGCACCTAAAAGCTGATGATATAATTTTACTTGTTTGACTACCAATCACCTCGAATGCAGGTTAAAGGGGTACTCCATGCTTAGTACACTTAACCTCTGAAAATACTTGTgtaatgtcttctgtggctaTGGAGGAGCTTCCTAAAGTCTGCAAAAAATAACTCTGATGTAATTTGGCCTGGGTTAGAAGACCACCTATAACGAACGCCTGTTTCAAACAGCAGGTGTGCAGTTTGAAAGTCGTGGGCATTCACCAGGCTAAGTGGGTCTACTGAAAGACGGTACGAATCTGCTTAACGAAAATTGTAGGATCCATGGTTTTGGAGTTTGTCCTATATTATTTACTAAAAGTCAGAACACCTCAGCTTTTGCTGCTTCAGTTTTGACCAGTCTTTCTTTAACATGTCTCTCACAAGTTCCCCAACTTTATAAAAGTGCGATAAAAGCTTTAGCTGACTTCAAATACACTAGTTTCAGTCACGTCTAAATCACTTGAGTAGCCCCTTTAACCCCACCTGGAAGAGGGGGTCACAGAAAAGATCGGAAAATGTTAACCGAAAAGAGCCAGGATCTCAGTACAGATAGAcccacatataaacacacatgcacagattaCAGGTCTTTGTGGTTCCAACTTTTAGGACCTGATCCAAAACGGACCTGAAACCATATTTGGATCCAACGTGCATAaagagttttcttttttaagaaagACTAaatctgaaatgtttttgaGGACACTACACCCCTGCCCGACCAAATGATACTAAACCTTATCTGGACCCGGCCTTACTTGGCTCCTGGGTCTGGTCTCTGTTACTAGGGACCAAGTGGATCCTCAAAGACCTAACAAACATATGTTCACAGACAGGATCCTCCAAACCCACCATCTCTGCATCTCCACActtgccttttctttttttaaatcgtaaatattttttaactaAATAACTTAAGGCGACTTTGAATATTGATCATTCTGTGGAGAGATAAAGCAACTGATTGATGAAGGTGATGATGAAGAACAAAATTACTTACCTGAACCAGAATGTCACTACTGGCCCCACAGTGGATCACAAGTTAAGAATAGATTTTATTAAATTCTTGTTAATGTTTTTTCCTAACGTTTTTCCAAATATATAAATGGTTTTTGATTGAAcgttagtctggggagtctgctctgtattttctactgcacaagaggcgtgatcaacgggcatagttcaaatgactctgtacgcaattggatagtccttcaaccaatcggaccaacgatccaggtgacgtagcagcgacagcggcatcaacgggttgctgccatggatgtattaagagagcggttgctgcgcttcggtggtcgccatgttgaatgtaaacaagaagctgcttggtcgctccTCTATCGTCATCGCGTTAAActcgccaatagcgcgccaggtggataaggcagtttgtgattggtccctgcAGATTTGTAATGGAAGCAGGacagataaacgtacaggtttccagcctgagctgcagggcgaaatcaaatcgccggcagattgggctgggtttacccgGTCTAGCGCGAACTAGCTACAAAACAGAAACCCCAacactttttaaatatttcaaagcTGTATTCTTTGATTTTGTGGTCACTGGAGGGGGAGAAAAGCCAAAACAAGCCACCAGATGCGCACACAGTATACCATGTAATGTATCGGTCGTttgagtgttttaaaaataaatcgaTGAATGCAGCTTTGA
>XM_039803710.1
CCGCATGATCGCTGAAGAAGAAGAATCGCGGAAGAAGGGAAAGGTTTCCTGACGGATCACCGGGCTAACCAGCTAACAAAGATAACTACCCGTCTTATCGGCAATTTAATCAGTATCAAGATGACAGCCGCACCTTACAACTACTCCTACATCTTCAAATACATCATCATCGgtGATATGGGAGTAGGGAAGTCCTGTCTGCTGCACCAGTTCACAGAGAAAAAATTCATGGCGGACTGTCCTCACACCATCGGGGTGGAGTTTGGGACGAGGATCATGGAGGTTAACGGTCAGAAAGTGAAGCTGCAGATCTGGGACACAGCCGGTCAGGAGCGCTTCAGGGCTGTCACCAGGTCCTATTACAGAGGGGCTGCCGGGGCCCTCATGGTGTACGACATCACcagGAGAAGTACTTATAATCACTTGAGCAGCTGGTTAACAGATGCCAGGAACCTGACCAACCCAAACACAGTGATCATTCTGATTGGTAACAAGGGCGACCTGGAGGCTCAGAGAGACGTGACGTACGAGGAGGCCAAACAGTTTGCGGAGGAGAATGGTTTGCTGTTTCTAGAGGCCAGCGCTAAGACAGGGGAGAATGTGGAAGAGGCCTTCCTGGAAGCGGCAAAGAGAATTTACCAGAACATCCAAGATGGCAGTCTGGACCTGAACGCTGCCGAGTCAGGAGTCCAGCATAAACCGTCTGCACCACAGGGAGGTCGCCTCAACGCCGACAGCCAGCCGGCCAAAGAAGGCTGCAGCTGCTAACCACAGACCCATCAGacagacggacggacggacagaAGCAGACAGATAACGTACACAGAGATCCACCAGGCACTAACATGCATCTTCTATCCAGAGTGCGTCAAACAGGATTTAGCTGGATTACATTTAACAGTCCAACCAACTGTTGTCAAATCCAGACCTCAGTTCAATACCCAAAACAAGATTCAACCATCCTCCACCCAATCAGATATTTACCAGCTTTGGTTAAATCAGGACACCTGCTACCAAATCCAGAAACTATCCAGATGTATATGTGCCACCTCTGGATCAGTGTTGGTCAACTTCCAAATCAGGACCACCCTAGACCTTAGCTGGATCACTGTTTGCACAAATTGAATCCCTAAGCATAAATCCCGGCCACTCTTGGTCCACACTTGGATCATGCTAGGTCTCATTCCAGCTTAGTCACTATGCCCATCGCCAGGCAAACCTTTCCCCAAAACTGGATGACCCTCTGGACCTTCCAAGATTAAAGTGCTGTTGGCCTGACTCAAGTGAAGGTTGTCCAATTTAGGACTACTCTGGTCACACTTgataacaatttattcattattattagtTAACAAATAAAGATACAAGACTCAAATTTGAATCAACCTACAGCCCAAATCTGATCTACACTTGCAGATCACCAAAATGCAGATCACCCAAAAAAACGTACACTTAAACTTTTGACATTTAGATTAGCCTCGACTCTTCTTGGTTCCAATTGAGGCCGCCTTCACCCCACATCCAGGCTGGCTTGGCCCAAAGGTAGGCCAAACTGGACTGTTGTAAGCTCAGAATAGCACCACCCTTAGCCCACCAACCGAAAACCATTTTCCCCAAGACTGAACCCAACTCAAGTGAGGGTATTCAAACTACTTTTGTCCCATATGTTAAACACCAATGAGACAGATAAAGATTCAATGCTTAAATTCGGACAAAAAAACGGATCACCCAAGTCTCAACTCCAGACATTCCTATGGACAGATTCAAAGCCTTGGCTCAAGCCAGACTGCTTACTGGTCCAAATCGAGGACCACCTCTAGTccaaatattcatatttagcTTTAATCTGATCTGCTATAAATCCAGATCGTCCAAACGCCCAACTCTGGCGTTCATGCTTTGATATAAACGTTGGGATTAATAGTCGTACTTATGTCTTATGTGTGTGGTATCCCATCATTTGTTGTTCAGTTGGAAAAGTCTTAAAAATTCATGCTTCAAATCCATTAATTCTAACCGAGTGGCCTGGACTCTCCTCATATCACTTGTTTCCAAACAGCTGCCCTTCGAGCTGACCCGTTGCATTTACACAGTGTCGGTAATGTGGATCCGAAGATGCATTTACACTGTAGTTGATGATGTGGATTGGAGACTTTTGAATTGAGTTGTTCTGTTGGAGTTCCAGCAATATTCGCACCTAAAAGCTGATGATATAATTTTACTTGTTTGACTACCAATCACCTCGAATGCAGGTTAAAGGGGTACTCCATGCTTAGTACACTTAACCTCTGAAAATACTTGTgtaatgtcttctgtggctaTGGAGGAGCTTCCTAAAGTCTGCAAAAAATAACTCTGATGTAATTTGGCCTGGGTTAGAAGACCACCTATAACGAACGCCTGTTTCAAACAGCAGGTGTGCAGTTTGAAAGTCGTGGGCATTCACCAGGCTAAGTGGGTCTACTGAAAGACGGTACGAATCTGCTTAACGAAAATTGTAGGATCCATGGTTTTGGAGTTTGTCCTATATTATTTACTAAAAGTCAGAACACCTCAGCTTTTGCTGCTTCAGTTTTGACCAGTCTTTCTTTAACATGTCTCTCACAAGTTCCCCAACTTTATAAAAGTGCGATAAAAGCTTTAGCTGACTTCAAATACACTAGTTTCAGTCACGTCTAAATCACTTGAGTAGCCCCTTTAACCCCACCTGGAAGAGGGGGTCACAGAAAAGATCGGAAAATGTTAACCGAAAAGAGCCAGGATCTCAGTACAGATAGAcccacatataaacacacatgcacagattaCAGGTCTTTGTGGTTCCAACTTTTAGGACCTGATCCAAAACGGACCTGAAACCATATTTGGATCCAACGTGCATAaagagttttcttttttaagaaagACTAaatctgaaatgtttttgaGGACACTACACCCCTGCCCGACCAAATGATACTAAACCTTATCTGGACCCGGCCTTACTTGGCTCCTGGGTCTGGTCTCTGTTACTAGGGACCAAGTGGATCCTCAAAGACCTAACAAACATATGTTCACAGACAGGATCCTCCAAACCCACCATCTCTGCATCTCCACActtgccttttctttttttaaatcgtaaatattttttaactaAATAACTTAAGGCGACTTTGAATATTGATCATTCTGTGGAGAGATAAAGCAACTGATTGATGAAGGTGATGATGAAGAACAAAATTACTTACCTGAACCAGAATGTCACTACTGGCCCCACAGTGGATCACAAGTTAAGAATAGATTTTATTAAATTCTTGTTAATGTTTTTTCCTAACGTTTTTCCAAATATATAAATGGTTTTTGATTGAAcgttagtctggggagtctgctctgtattttctactgcacaagaggcgtgatcaacgggcatagttcaaatgactctgtacgcaattggatagtccttcaaccaatcggaccaacgatccaggtgacgtagcagcgacagcggcatcaacgggttgctgccatggatgtattaagagagcggttgctgcgcttcggtggtcgccatgttgaatgtaaacaagaagctgcttggtcgctccTCTATCGTCATCGCGTTAAActcgccaatagcgcgccaggtggataaggcagtttgtgattggtccctgcAGATTTGTAATGGAAGCAGGacagataaacgtacaggtttccagcctgagctgcagggcgaaatcaaatcgccggcagattgggctgggtttacccgGTCTAGCGCGAACTAGCTACAAAACAGAAACCCCAacactttttaaatatttcaaagcTGTATTCTTTGATTTTGTGGTCACTGGAGGGGGAGAAAAGCCAAAACAAGCCACCAGATGCGCACACAGTATACCATGTAATGTATCGGTCGTttgagtgttttaaaaataaatcgaTGAATGCAGCTTTGA

Function

NR:

description
PREDICTED: ras-related protein Rab-14-like

GO:

id name namespace
GO:0007264 small GTPase mediated signal transduction biological_process
GO:0015031 protein transport biological_process
GO:0005525 GTP binding molecular_function

KEGG:

id description
K07881 RAB14; Ras-related protein Rab-14

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039803709.1 True 3989 mRNA 0.45 8 15309058 15317062
XM_039803710.1 False 3947 mRNA 0.45 8 15309058 15317052

Neighbor

gene id symbol gene type direction distance location
ercc6l LOC102777350 coding downstream 97354 15202139 ~ 15211704 (-)
adam9 adam9 coding downstream 109708 15158381 ~ 15199350 (-)
ogdha LOC103368074,LOC101476977,LOC103397981 coding downstream 156449 15109016 ~ 15152609 (-)
LOC120560949 LOC103368073,LOC103397982 coding downstream 204950 15078885 ~ 15104108 (-)
ppiaa LOC107103142,LOC106904245,LOC103470758,LOC106953379,LOC103129635 coding downstream 232663 15070267 ~ 15076395 (-)
si:dkey-220o5.5 NA coding upstream 26361 15343423 ~ 15363941 (-)
rsph14 NA coding upstream 86786 15403848 ~ 15408301 (-)
srp19 srp19 coding upstream 92134 15409196 ~ 15415459 (-)
LOC120560845 NA coding upstream 155008 15472070 ~ 15502444 (-)
LOC120560846 LOC104943351 coding upstream 187312 15504374 ~ 15514901 (-)
G61813 mak16 non-coding downstream 2991 15303729 ~ 15306067 (-)
G61742 NA non-coding downstream 128639 15152994 ~ 15180419 (-)
G61740 NA non-coding downstream 179095 15106265 ~ 15129963 (-)
G61711 NA non-coding downstream 240165 15068542 ~ 15068893 (-)
G61706 NA non-coding downstream 281663 15026519 ~ 15027395 (-)
G61837 ppp2cb,LOC102205414,LOC106587035,LOC100710281,LOC105025380 non-coding upstream 108489 15425551 ~ 15427495 (-)
G61894 LOC103373661,LOC101481450,LOC102205139 non-coding upstream 141771 15458833 ~ 15462921 (-)
LOC120560849 NA non-coding upstream 224770 15541832 ~ 15544351 (-)
G61956 NA non-coding upstream 456617 15773679 ~ 15777138 (-)
G61993 NA non-coding upstream 620914 15937976 ~ 15939248 (-)
mfsd14bb LOC103398013,LOC102210719 other downstream 30874 15252615 ~ 15278184 (-)
LOC120560831 NA other downstream 76365 15224970 ~ 15232693 (-)
sdhaf1 sdhaf1,LOC102800057 other downstream 90636 15216550 ~ 15218422 (-)
tti2 tti2 other downstream 267678 15029876 ~ 15041380 (-)
LOC120559984 NA other downstream 291242 15013533 ~ 15017816 (-)
LOC120560838 NA other upstream 51964 15369026 ~ 15402324 (-)
LOC120560105 LOC103362503 other upstream 835358 16152420 ~ 16452488 (-)
G62064 NA other upstream 1187564 16504626 ~ 16505067 (-)
LOC120561322 NA other upstream 1231555 16548617 ~ 16551175 (-)
LOC120560425 NA other upstream 1766417 17083479 ~ 17085821 (-)

Expression


Co-expression Network