si:dkey-220o5.5


Basic Information

Item Value
gene id si:dkey-220o5.5
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 15343423 ~ 15363941 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039803711.1
CGGAAAGAAAGAGAGTTCACTGAGGAGGAAATCTGTTCTCTGTTTCTGTTGCTTGGTGTTTTGGACTCTGGAGCAGAGAAATGACAGTGAAGATCAGCAGCAACTGagacgacagacagacatggaCAAACAGAAAGTGCTGTCCAAGCTGATCTGGGATCTGCAGTCCTTCCTGTCTGTTCTGGACTCTGAACAGAACCTGAGTTACATCGCTCAGTCTCAGAAGAAATCCATCTCAGAGCTGCTGTCCAAACTGCAAACAAACGACACTCCtgTGGAAGATGCTGAGTACATGATCATGAGCTGTCCATCATCGTCTCCTAGCAACGAGCTGGCAGTCACACCTGGGACAGAAGGTGTCCAGTCTGAGCTGGTCTTAAATCAGGACTCATCTGTGTGGCTGACAAAAGGGgGCCCTGAGGTGCCACCCCTACCTCCAGGAGGTCTTGGAGGggatgaggatgatgaagaTACCTACGAGGAGGCGGAACCTTACCTACCAGACACAACCACTAACACTGAGAAGGCGGAGTCAGACAGCAGTCACTACGAGTCGTACGGGgaggaagatgatgatgatgatgatgatgatgagaagcCTGTGAAGGACAGAGCTCACTACATCCAATGGAGCGCCTCCCAGCCCTGCCTAAGACCCATCCCCGAGTCCCGCCTCTGTGGTTACCTGTGGAAGAGGAAGTGGCTCGGACAGTGGACCAAACAGCTGTTCATCATCAGGAGCGATGTGATGCTGtgttaTAAGTGTGCTCAGGACCTGCTGCCTCAGCTGGAGTTGAACCTGCGCGGCTGTCAGCTCGTCTACAAGTCAAAGAACAATAGGAAGATCCAGCACCAGCTCAAACTGGTGTTACTGGGCTCAGAGACACTGGTGCTGGGCTACAGCAGCTTCCAGCAGGCCGACGAATGGAGGAGGgtgaTAGAGGAGGTGAGTGCTGGGGGTGAAGTGGAGACTCAGAGCTCGTTGTCTCTGATCAGATCAGACCGGCCGCTGTCCTGCAGGTCCAGTACAGTCCAGTTTGACACTGAGGAAGAGAAACCTTCAGCTGGCTGCAGCCTCAACAAAGACAAAGGTTTCCTGAGCGTGTTGATGAACTGTCAGTGGCAGAGTTTACTGTGTCAGGTGGAGGCAGGTCTACTCAAGATGtttggagaggaggagaaggaggaggaggtagagaggtcgcctcaGTACACCGTCCAGCTCAGAGGGTGCGAGGTCAGAGGCGGGCCTGACACCGACCACTCCTACAGGATCACACTGAGCATGCTCGGTGACCAGGTGGCTGTGCTGGAGGTGAGTAGTTCAGATGAAAAGGAGCGATGGCTAAAGCTGCTGCAGGACGGAGCTGCCAATCACAGTCGCCAAGACAACAACGCACAGATCAACACAGGTGGAGCTCTCAGTGGGCTGCAGACTCGAAAGTTTCCCACCTCCAACACCTACATGGACGACCCCTTCCACCTTAGTGGAGCAGGCCAAGACCAGCCCATCTACTCCAACACCTCCATACTGGAGCTCATGCTCCACAGCTCTCAGGATTCAGTTCACTGCAGCTCGGTGTCGTCCAGAGACTCAGTGGCCTACAGCAACACCGTCTTCACCAGCCACAACAGGAAGTCGGTGGAAGTGGAACGAGGCGTTCAGAAGCTGGAGTTAACGGGGAAGAGGACGGTGCAGCTGAGAGCGGGGTCAGAGATTAACCTGGCGTCTGTCGGAAAGCAAAACAAACGCACCTCTTTTAGACAGTCGCTGGCCATCTGCGGTGAGCGTGCTCAGGCGGGTTTCCTGAACCCTCTGCTGCGACGGACGGCCTCAGCTAAAAACTCTCTCAGACGAGCTCCTTCAGCACTGTTCATTGAACATGGGAAGGTTTTCCAGAGGAGGAAGGAATGGGAAACCAAAGCTGCTGCTTGATACCAACCgtctgtcatcatcatcatcatcatcatcatcatcatcatcatcatcatcatcatcatcatcatcatcatcatcattatcatcatcatctacaAACAGTCCTCTCAATTGGAGAACTTTCTGACATGCTTTACAATGAGTGAAGTTACTCATTACGGTCAGAGGTGGAGAAAGTATATTTTATTCCataaaagtagtaataccacagtatagaaatactctgttacaaatGAAAGTCCTaatcttacttaagtaaaagtacaaaagtattagcatcaaagTATA
>XM_039803712.1
CGGAAAGAAAGAGAGTTCACTGAGGAGGAAATCTGTTCTCTGTTTCTGTTGCTTGGTGTTTTGGACTCTGGAGCAGAGAAATGACAGTGAAGATCAGCAGCAACTGagacgacagacagacatggaCAAACAGAAAGTGCTGTCCAAGCTGATCTGGGATCTGCAGTCCTTCCTGTCTGTTCTGGACTCTGAACAGAACCTGAGTTACATCGCTCAGTCTCAGAAGAAATCCATCTCAGAGCTGCTGTCCAAACTGCAAACAAACGACACTCCtgTGGAAGATGCTGAGTACATGATCATGAGCTGTCCATCATCGTCTCCTAGCAACGAGCTGGCAGTCACACCTGGGACAGGTGTCCAGTCTGAGCTGGTCTTAAATCAGGACTCATCTGTGTGGCTGACAAAAGGGgGCCCTGAGGTGCCACCCCTACCTCCAGGAGGTCTTGGAGGggatgaggatgatgaagaTACCTACGAGGAGGCGGAACCTTACCTACCAGACACAACCACTAACACTGAGAAGGCGGAGTCAGACAGCAGTCACTACGAGTCGTACGGGgaggaagatgatgatgatgatgatgatgatgagaagcCTGTGAAGGACAGAGCTCACTACATCCAATGGAGCGCCTCCCAGCCCTGCCTAAGACCCATCCCCGAGTCCCGCCTCTGTGGTTACCTGTGGAAGAGGAAGTGGCTCGGACAGTGGACCAAACAGCTGTTCATCATCAGGAGCGATGTGATGCTGtgttaTAAGTGTGCTCAGGACCTGCTGCCTCAGCTGGAGTTGAACCTGCGCGGCTGTCAGCTCGTCTACAAGTCAAAGAACAATAGGAAGATCCAGCACCAGCTCAAACTGGTGTTACTGGGCTCAGAGACACTGGTGCTGGGCTACAGCAGCTTCCAGCAGGCCGACGAATGGAGGAGGgtgaTAGAGGAGGTGAGTGCTGGGGGTGAAGTGGAGACTCAGAGCTCGTTGTCTCTGATCAGATCAGACCGGCCGCTGTCCTGCAGGTCCAGTACAGTCCAGTTTGACACTGAGGAAGAGAAACCTTCAGCTGGCTGCAGCCTCAACAAAGACAAAGGTTTCCTGAGCGTGTTGATGAACTGTCAGTGGCAGAGTTTACTGTGTCAGGTGGAGGCAGGTCTACTCAAGATGtttggagaggaggagaaggaggaggaggtagagaggtcgcctcaGTACACCGTCCAGCTCAGAGGGTGCGAGGTCAGAGGCGGGCCTGACACCGACCACTCCTACAGGATCACACTGAGCATGCTCGGTGACCAGGTGGCTGTGCTGGAGGTGAGTAGTTCAGATGAAAAGGAGCGATGGCTAAAGCTGCTGCAGGACGGAGCTGCCAATCACAGTCGCCAAGACAACAACGCACAGATCAACACAGGTGGAGCTCTCAGTGGGCTGCAGACTCGAAAGTTTCCCACCTCCAACACCTACATGGACGACCCCTTCCACCTTAGTGGAGCAGGCCAAGACCAGCCCATCTACTCCAACACCTCCATACTGGAGCTCATGCTCCACAGCTCTCAGGATTCAGTTCACTGCAGCTCGGTGTCGTCCAGAGACTCAGTGGCCTACAGCAACACCGTCTTCACCAGCCACAACAGGAAGTCGGTGGAAGTGGAACGAGGCGTTCAGAAGCTGGAGTTAACGGGGAAGAGGACGGTGCAGCTGAGAGCGGGGTCAGAGATTAACCTGGCGTCTGTCGGAAAGCAAAACAAACGCACCTCTTTTAGACAGTCGCTGGCCATCTGCGGTGAGCGTGCTCAGGCGGGTTTCCTGAACCCTCTGCTGCGACGGACGGCCTCAGCTAAAAACTCTCTCAGACGAGCTCCTTCAGCACTGTTCATTGAACATGGGAAGGTTTTCCAGAGGAGGAAGGAATGGGAAACCAAAGCTGCTGCTTGATACCAACCgtctgtcatcatcatcatcatcatcatcatcatcatcatcatcatcatcatcatcatcatcatcatcatcatcattatcatcatcatctacaAACAGTCCTCTCAATTGGAGAACTTTCTGACATGCTTTACAATGAGTGAAGTTACTCATTACGGTCAGAGGTGGAGAAAGTATATTTTATTCCataaaagtagtaataccacagtatagaaatactctgttacaaatGAAAGTCCTaatcttacttaagtaaaagtacaaaagtattagcatcaaagTATA

Function

NR:

description
actin filament-associated protein 1-like 2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039803711.1 True 2227 mRNA 0.51 16 15343423 15363941
XM_039803712.1 False 2224 mRNA 0.51 16 15343423 15363941

Neighbor

gene id symbol gene type direction distance location
LOC120560836 LOC103398011,LOC102234551,LOC103373450,LOC107386141,LOC101064581 coding downstream 26361 15309058 ~ 15317062 (-)
ercc6l LOC102777350 coding downstream 131719 15202139 ~ 15211704 (-)
adam9 adam9 coding downstream 144073 15158381 ~ 15199350 (-)
ogdha LOC103368074,LOC101476977,LOC103397981 coding downstream 190814 15109016 ~ 15152609 (-)
LOC120560949 LOC103368073,LOC103397982 coding downstream 239315 15078885 ~ 15104108 (-)
rsph14 NA coding upstream 39907 15403848 ~ 15408301 (-)
srp19 srp19 coding upstream 45255 15409196 ~ 15415459 (-)
LOC120560845 NA coding upstream 108129 15472070 ~ 15502444 (-)
LOC120560846 LOC104943351 coding upstream 140433 15504374 ~ 15514901 (-)
LOC120560851 NA coding upstream 205758 15569699 ~ 15577254 (-)
G61813 mak16 non-coding downstream 37356 15303729 ~ 15306067 (-)
G61742 NA non-coding downstream 163004 15152994 ~ 15180419 (-)
G61740 NA non-coding downstream 213460 15106265 ~ 15129963 (-)
G61711 NA non-coding downstream 274530 15068542 ~ 15068893 (-)
G61706 NA non-coding downstream 316028 15026519 ~ 15027395 (-)
G61837 ppp2cb,LOC102205414,LOC106587035,LOC100710281,LOC105025380 non-coding upstream 61610 15425551 ~ 15427495 (-)
G61894 LOC103373661,LOC101481450,LOC102205139 non-coding upstream 94892 15458833 ~ 15462921 (-)
LOC120560849 NA non-coding upstream 177891 15541832 ~ 15544351 (-)
G61956 NA non-coding upstream 409738 15773679 ~ 15777138 (-)
G61993 NA non-coding upstream 574035 15937976 ~ 15939248 (-)
mfsd14bb LOC103398013,LOC102210719 other downstream 65239 15252615 ~ 15278184 (-)
LOC120560831 NA other downstream 110730 15224970 ~ 15232693 (-)
sdhaf1 sdhaf1,LOC102800057 other downstream 125001 15216550 ~ 15218422 (-)
tti2 tti2 other downstream 302043 15029876 ~ 15041380 (-)
LOC120559984 NA other downstream 325607 15013533 ~ 15017816 (-)
LOC120560838 NA other upstream 5085 15369026 ~ 15402324 (-)
LOC120560105 LOC103362503 other upstream 788479 16152420 ~ 16452488 (-)
G62064 NA other upstream 1140685 16504626 ~ 16505067 (-)
LOC120561322 NA other upstream 1184676 16548617 ~ 16551175 (-)
LOC120560425 NA other upstream 1719538 17083479 ~ 17085821 (-)

Expression


Co-expression Network