rsph14



Basic Information


Item Value
gene id rsph14
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 15403848 ~ 15408301 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>XM_039803721.1
CTAGCCCTAGCCCGGTGAGCTCTATGATTAACTAGGGGTTTTAAACTAGGTTAATTAACGAACACCAGATGGCCGGTTGTCTGATAGATCCGAGCCGGGCTCCGGTGGCCTTTGGGTGGCGGGCCGTGCCGCAGCTGTtcgaggagctgcagcaggcgGAGGCGGACAGGAGGCTGCGAGCTCTGGCTTCACTCTGCGACCTGATGCACGACCCGGAGCGGATCTACCAGGCTGTTAACGGGGgTTTTCTGGAGCAGTTGGAGGTTTTGTTTGAGGATGAAGATTCATCAGTCAGAACAAAAACCTGTGAGCTGCTTCACCTCATGACTGCCCACAGCATCGGCAGACAGGccctgctctcctcctccctcctccctcctctctctcggCTGGTGGAGGACAACTCGTCCTCCTGCAGGAGGAACGTCCACCGAGTGCTGAACCGCCTCACTCTGCTGCCTGCAGGTGCAGACGCTCTCCTGACTCTGGTTCCTAAACTGATGCTGAAGCTGAGAGgggaggaagatgaggaagaggaggtgcAGGTGCTGCTCCTCTCCACCCTAAGCTCCTGCTCCAGGCTGGATGCTCTGCCGGCTCTGGCCTCTGACGGTGTCTCGCTGCTGGGCCACAAACTCTCCCACCGCTCCCCGAACATCCGCAGGGAGGCGGCTGCAGTCTTGATGGCCCTCAGTGTTTGTGAGGATGGGAAGCTCCAGGTGTGTGAGGAGTCGTTACTTCCTGTCCTGGTCAACCTGCTGCATGACGAAGACATCGAGGTTCAGGCCAACGCTGCAGGAGTCATCATGTACACTGTGATCATCACCACAGGTAAGAAGCAGTGTCTGGATCTGGACGTCATTCCCGTCCTCCTCGAACTGGTGTCCaagaaggaggaggtggaggaggagaagaagaggaagagcaggaaggCCCTCGTCATGTACTCCCTGCGCGCTCTGACTGCACTGGCTGAAGCTCCGGACGGCCGCCGCCTCCTGCTGGAGCAGCTTCCCCTGCTGCTGAGGAGGAGTGAGGCTGCAGAGGAGGACCACGACATCCGGCGGGACGCTCAGACCGCCGTCAGGGTCATCAATTGGAGACCCtgatgacctctgacctccagaACAGACCTGCTGGGTCAACCTCTGCTaattacataataaataaatgtaacaaTTCTA

Function


NR:

description
radial spoke head 14 homolog isoform X1

GO:

id name namespace
GO:0022412 cellular process involved in reproduction in multicellular organism biological_process
GO:0019538 protein metabolic process biological_process
GO:0007281 germ cell development biological_process
GO:0006508 proteolysis biological_process
GO:0003006 developmental process involved in reproduction biological_process

KEGG:

id description
ko04972 Pancreatic secretion
ko04974 Protein digestion and absorption
ko05164 Influenza A

RNA


RNA id representative length rna type GC content exon number start site end site
XM_039803721.1 True 1184 mRNA 0.58 6 15403848 15408301

Neighbor


gene id symbol gene type direction distance location
si:dkey-220o5.5 NA coding downstream 39907 15343423 ~ 15363941 (-)
LOC120560836 LOC103398011,LOC102234551,LOC103373450,LOC107386141,LOC101064581 coding downstream 86786 15309058 ~ 15317062 (-)
ercc6l LOC102777350 coding downstream 192144 15202139 ~ 15211704 (-)
adam9 adam9 coding downstream 204498 15158381 ~ 15199350 (-)
ogdha LOC103368074,LOC101476977,LOC103397981 coding downstream 251239 15109016 ~ 15152609 (-)
srp19 srp19 coding upstream 895 15409196 ~ 15415459 (-)
LOC120560845 NA coding upstream 63769 15472070 ~ 15502444 (-)
LOC120560846 LOC104943351 coding upstream 96073 15504374 ~ 15514901 (-)
LOC120560851 NA coding upstream 161398 15569699 ~ 15577254 (-)
LOC120560852 NA coding upstream 172991 15581292 ~ 15590436 (-)
G61813 mak16 non-coding downstream 97781 15303729 ~ 15306067 (-)
G61742 NA non-coding downstream 223429 15152994 ~ 15180419 (-)
G61740 NA non-coding downstream 273885 15106265 ~ 15129963 (-)
G61711 NA non-coding downstream 334955 15068542 ~ 15068893 (-)
G61706 NA non-coding downstream 376453 15026519 ~ 15027395 (-)
G61837 ppp2cb,LOC102205414,LOC106587035,LOC100710281,LOC105025380 non-coding upstream 17250 15425551 ~ 15427495 (-)
G61894 LOC103373661,LOC101481450,LOC102205139 non-coding upstream 50532 15458833 ~ 15462921 (-)
LOC120560849 NA non-coding upstream 133531 15541832 ~ 15544351 (-)
G61956 NA non-coding upstream 365378 15773679 ~ 15777138 (-)
G61993 NA non-coding upstream 529675 15937976 ~ 15939248 (-)
LOC120560838 NA other downstream 1524 15369026 ~ 15402324 (-)
mfsd14bb LOC103398013,LOC102210719 other downstream 125664 15252615 ~ 15278184 (-)
LOC120560831 NA other downstream 171155 15224970 ~ 15232693 (-)
sdhaf1 sdhaf1,LOC102800057 other downstream 185426 15216550 ~ 15218422 (-)
tti2 tti2 other downstream 362468 15029876 ~ 15041380 (-)
LOC120560105 LOC103362503 other upstream 744119 16152420 ~ 16452488 (-)
G62064 NA other upstream 1096325 16504626 ~ 16505067 (-)
LOC120561322 NA other upstream 1140316 16548617 ~ 16551175 (-)
LOC120560425 NA other upstream 1675178 17083479 ~ 17085821 (-)
G62194 NA other upstream 1715695 17123996 ~ 17124477 (-)

Expression



Co-expression Network