LOC120560851


Basic Information

Item Value
gene id LOC120560851
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 15569699 ~ 15577254 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039803731.1
CTAACACCAACTAGTGAAGCCGGATAAACCTTAGATCCTGTAAAGAGTGGAGTCATGACGCAGCAACAGTCAGCTGGGTTATAAAACCAACTGTTGGTCTCCAGCTGATCTTCTTCTATTGTTTCCAGCATAGTGACAGTATGGCAGCATCTGGAAACATTCTGAGATCTCTGAgccacagcagcagctgtcCCATTCTTCCCCCTTCCAtGTCAGAGCTGAGGGTTGTTCTGCTGGGGAACAGCTGGTCTGAGAGGAGTTCAGTGGGGAACTTCATACTGGGAGAGACTGTGTTCAACACTGAGGAAGAACCAGACCGCTGtctgagagaaagaggacagttAAAGGACAAAGGGATCGTTCTGATCAACACTCCAGATCTGCTGCACCCCAACATCTCTGAAGAAAAACTGACAGAACATTTAGAAAACTGTGGGAGACTCTCTGATCCTGGCCTTCATGTGTTCCTGCTGGTTCTACAGCCTGAAGACTTCACTGAGAAACACAAAGTGAAGCTCTGCCAAGTCTTGAAACTCTTCGGTTATCAATCATTTGACCATTCATTGATATTGATATCAACACCCAGAGAGGATAGCGCAGCTTTCAAAGACAAAGATGAACCAGACCAGTCATTAAAAGACATGATCAAAATGTGTAGATACAGATACTTGAAGCAGAAGAACCTTGAACTTTCAGAGCTGTTAACACGTTTAAATCAAACTGCAACGGAACACAATGGAGAGCATGTGAGCTGTGATGTATTTGAGGATGCAGGTTTGATCATGACACCAACATCTGGACACATCAGACCAGCTTTAAACCTGGTTCTGTGtgggaggagaggagcagggaAGACTTCAGCAGCCAAGGCCATTTTAGGTCAGACAGAGCTCCATTCAGTCTCCAACCCATCAGAGTGTGTTAAACATCAGGGAGAGGTGTGTGGACGTCGGGTGTCCCTGGTGGAGCTGCCTGCCTTGTATGGAGAAGGTCAGGAGAAAGTGATGGAGGAATCATTCAGGTGTATCTCCCTCTGTGATCCTGAGGGTGTCCATGCCTTCATCCTGGTCCTACCTGTGGGTCCCCTCACTGATGAAGACAAGGGAGAGTTAGAGACCATCCAGAACACTTTCAGCTCTCGAGTCAATCACTTCACCATGATTCTGTTCACTGTGGAGTCAGATCCTACAGCTCCAGCTGTTGTTAAGTTTCTAAAGAAAGACAATGGCATCcaggagctctgtcagagctgtggaggaagatatGTTGTTCTCAACATCAAGGACCAGCAGCAGATCCCAGAGCTATTGGATGCTGTTGAAAAGACGAGAGTTGAAGGATCCCGATGCTTCACAAAGGACATATTCACCAAGGCTCAGATGGAGAAGGTTTCAAGACTTGAAGCTGAGCTGCAGGATGTGAAACAAAAGACGGCCATAGGAGGTGATGGTGAGAGTCAGAGCAGAGAGTGTCTCAGGATGGTGCTGATTGGGAAGACTGGCAGTGGGAAGAGTGCAACAGCAAACACCATTTTGGGCGAAAAGCACTTCAAACCCAGAATCACACCGAAGCCAGCGACAAAGTCTTGTAAGAAAGCAACGGGAGAGATTGAGGGACGGCCAGTTGTTGTCGTGAACACCCCCGACTTGTTCGACAAGACTTTGTCTGATGATGAAGGTCagcaggaaataaaaaaatgcatcagCATGTTGTCTCCCGGACCTCATGTGTTCTTACTGGTGCTGCAGATTGGGAACTTCACACAAGAGGAAAAAGACTCTGTGGAACTGATCAAGAAATATTTTGGCAAGAAGTCTGAAGATTTCATCATCATTATATTCACCAGAGGAGATGATCTGGAGGATCAGTTATTTGAGAGTTATGTCGAAAACTGTGATGGCTTTGTCAAAAAACTCATCAATGACTGTGGAGGGAGATACCAGGTCTTCAACAACAAAGATGACACAAACCGCACACAAGTCAGAGAGCTGCTGACCAATATCGAGACCATGGTGAAGGAAAATGGCGGCTGCTACAACAATGAGATGTCTGACGACACAGAGGGATACATACAAATGCAAGTGCAGAACATCTTgaaagagaaggaagaagagATGAAGAGAAAGGATGAGGACCTCCGGAGAAAACACGAGGAAGACTtgaaaacactgaaaagcaaaatcaaagaagaggagaggaaactgAGAGAAAAACAGCTACAGGAAAAAGACGAATGCATCAACAAGGAGCgtgagaagagaaagaaagaacgggaggaagaggagaggagacgcAAAAAGCAAGAAGAAACTCTGCGACAGGAATGGAGAAGAAAATTGGAAGCTTCAGAGAAAACCGTTCAGTTAGAAAGAGAGCTAAAGGAAAACGCTGAGAGGAAGCTGGAGCTGTTTAGAAAAGAGACGAAGAGAGATCGAGATGCCTGGGATAAGGAAAGAAAGGAGACCTGGGAACGAATACGTCAAGAGGATAAACAAAGCCTAGAGGAGGGGAAAACCAGCCTCAGGAAGCTCCAAGAAGAGTACCATCATAAGAGAAGAAAATGGACATTTGCTgtggttgtgctgctgttgtttctgttgtttctattatgttatatatttcTGAGTTAGAAACTCACAAACTGCAGACAGCCCAACGACAAAGGTGGCAGGTTTACATTTATTGACTACATTACAGATCGATGTCTCCATCTTCAGATTACACAAAGTTATTGAGGAAAAAATTAAATCGACACACAGGGAAAAGACATTAATACAGCCATATgactcatacagacaaacaaaaatagTCTGTTGAAGTGTGTAGAAATGGGAACTTCTGACTAAAAATCAAATGATATGGCTACTAATCCAGTTCTCTGGATGTTATGTAGGTTTTTTCAAACCCCAGTTCACTATGTGACAGTAAAGCCATTGTCTCATATGAACTCTGGACAATGTCTTGAGTTTTCCTTTTACACATGTAACGTTCTTACTTAATAATCTGTTTGATCTAGGCCAGGGGTGGCACCTGGCTAGTTCCGTTCATtacattttttgacaattttggcATCAGCCCTTACCGACAGAACTTCCCGAATCTTGTTGTCTCTCATTCACATTGGCGTCTTCATGTAAATCACTCTCATTCTTCACagacagggttcaaaattagcccGAGCTACACACCAAATGCtggtggctggtagatttgcttcacttactagccaaaaaaacaatggtagtctattgagtggctggtcaaatttaaacattcactagccatttggctggtggacgaaaagttaattttgaaccctgcccTCAGATGTTTATATTCTTCCAATAATGTGCTAGCCCCATGATAGAAACATCATCTTTgtttgtttcacaaaaccaagataagggattaagccgggatattccagttatcctggatgaatttagccttgactcggtttcacgaaaacggaggcacataaatcac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039803731.1 True 3486 mRNA 0.44 5 15569699 15577254

Neighbor

gene id symbol gene type direction distance location
LOC120560846 LOC104943351 coding downstream 54798 15504374 ~ 15514901 (-)
LOC120560845 NA coding downstream 67255 15472070 ~ 15502444 (-)
srp19 srp19 coding downstream 154240 15409196 ~ 15415459 (-)
rsph14 NA coding downstream 161398 15403848 ~ 15408301 (-)
si:dkey-220o5.5 NA coding downstream 205758 15343423 ~ 15363941 (-)
LOC120560852 NA coding upstream 4038 15581292 ~ 15590436 (-)
LOC120560853 NA coding upstream 14091 15591345 ~ 15602271 (-)
LOC120560939 NA coding upstream 38538 15615792 ~ 15622228 (-)
fam81b NA coding upstream 45675 15622929 ~ 15634506 (-)
slf1 slf1 coding upstream 199989 15777243 ~ 15811420 (-)
LOC120560849 NA non-coding downstream 25348 15541832 ~ 15544351 (-)
G61894 LOC103373661,LOC101481450,LOC102205139 non-coding downstream 106778 15458833 ~ 15462921 (-)
G61837 ppp2cb,LOC102205414,LOC106587035,LOC100710281,LOC105025380 non-coding downstream 142204 15425551 ~ 15427495 (-)
G61813 mak16 non-coding downstream 263632 15303729 ~ 15306067 (-)
G61742 NA non-coding downstream 389280 15152994 ~ 15180419 (-)
G61956 NA non-coding upstream 196425 15773679 ~ 15777138 (-)
G61993 NA non-coding upstream 360722 15937976 ~ 15939248 (-)
G61996 NA non-coding upstream 405622 15982876 ~ 15983411 (-)
G61998 NA non-coding upstream 519167 16096421 ~ 16100383 (-)
G62001 NA non-coding upstream 539973 16117227 ~ 16141681 (-)
LOC120560838 NA other downstream 167375 15369026 ~ 15402324 (-)
mfsd14bb LOC103398013,LOC102210719 other downstream 291515 15252615 ~ 15278184 (-)
LOC120560831 NA other downstream 337006 15224970 ~ 15232693 (-)
sdhaf1 sdhaf1,LOC102800057 other downstream 351277 15216550 ~ 15218422 (-)
tti2 tti2 other downstream 528319 15029876 ~ 15041380 (-)
LOC120560105 LOC103362503 other upstream 575166 16152420 ~ 16452488 (-)
G62064 NA other upstream 927372 16504626 ~ 16505067 (-)
LOC120561322 NA other upstream 971363 16548617 ~ 16551175 (-)
LOC120560425 NA other upstream 1506225 17083479 ~ 17085821 (-)
G62194 NA other upstream 1546742 17123996 ~ 17124477 (-)

Expression


Co-expression Network