LOC120560867


Basic Information

Item Value
gene id LOC120560867
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 8387822 ~ 8389118 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039803745.1
TGGTCACACACATTTAATTTGTACATATATACTTTGATAGAGGTTGCTAAAAAGCCATTTGTAaaccaaagaaaaataaaaccagCTGAGCTGAGTGTAGCTATAAGGATGTGGCCCACAATGAGGATAAACTGGACAAAGAAACGTCTGTTTAAAAAGTAGGCTTGTCTGTGGAGTCCTCCCTTCAGAGGTTTGTTCAGGCCTAGCGGTGTAGACCCCAACCCATAAGCCTCCTGCAGACACACCTGTAGAGGAGAGTATAAAGACTCTGGACTGAACTGAGTCAAACCTCAAGCTTGAAGGAGTCTCTCCACAGCAGCTCTCCAGAGAAGCTCCACAGCCTCCAGACCGACCCTGAAGATGACTCCCTCTGccagcctgctgctgctgctcctgctcgGCCTCTCACAGGCACTTCCTCTCCAGGAGGAAGGAGGCGAAGACGACGAAGAAGCCCCCGACACCGTCGACATCACCACCAGGATTCTGACCTCCAACAAGGGCAGCGATGAGATCCTGCTGGAAGGAGACCTGCTGGTTCCCAGAACTAGAAATGCCCTAATGTGCTATACCCAGAACTGCTTCTGGAAGAAAAACTCCAGCGGCCTGGTGACGGTCCCCTTCACCGTGAGCAGTGAGTTCACCAGCTCAGAGAAGCGGCTGATTGTCAACGCCTTGCAGGGCTTCCACAGCAAAACCTGTATCCGCTTCGTGCCCCGTAACAACGAGACCGACTACATCAGCGTGGAGAACAAAGCAGGATGTTTCTCCTCTCTGGGCAAAGTGGGAGGCAGACAGGTGCTCTCTCTGCAGAGGCAGGGCTGCGTCTACTACGGCATCATCCAGCACGAGTTCAACCACGCTCTGGGCTTCTGGCATGAACAGACCAGGAGCGATCGCGACAACTACGTCACGATCAATTGGGCCAACATCGACCCTCAGATGGCCTACAACTTCAACAAGCAGGTCAGCAACAACCTGAACACTTCCTACGACTACAGCTCCATCATGCACTATGGAAGAACAGCCTTCTCCATCAACGGGCAGGACTCCATCACCCCAATCCCCGACCCTAACGTCCAGATCGGCCAGAGGCAGGGCTTGTCCTCCTGGGACATCATAAGGATCAATAAGCTCTACAGCTGCTAAAAACAACACATCTTATCCAAAGTTATCAGTTATGAAAACAAGTTTCTGTTCATATATTCTTTAAGCAGACAGCAGAATCTAAGACTATGAATCTGTGAATATAAGGCtctgaaatacaaaataaaacctcCACAATCTAATCTcacca

Function

GO: NA

KEGG:

id description
K08778 ASTL; astacin-like metalloendopeptidase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039803745.1 True 1297 mRNA 0.50 1 8387822 8389118

Neighbor

gene id symbol gene type direction distance location
bicdl1 bicdl1 coding upstream 183636 8172560 ~ 8204186 (+)
LOC120560501 mtmr3,LOC103152423 coding upstream 304448 8078302 ~ 8083374 (+)
mtmr3 mtmr3 coding upstream 309654 8055365 ~ 8078168 (+)
rad9b NA coding upstream 474302 7904789 ~ 7913520 (+)
LOC120560606 NA coding upstream 483228 7898563 ~ 7904594 (+)
LOC120560486 LOC107690107 coding downstream 76053 8465171 ~ 8482178 (+)
zgc:110329 LOC103366798,LOC104939353,LOC104956029 coding downstream 421436 8810554 ~ 8836973 (+)
slc4a5a slc4a5,LOC100703988,LOC101470466,LOC102293566,LOC102195261 coding downstream 472852 8861970 ~ 8907724 (+)
zgc:113436 LOC102776507 coding downstream 533165 8922283 ~ 8933253 (+)
LOC120560802 abcb9,LOC106965289 coding downstream 550711 8939829 ~ 8965106 (+)
G60120 NA non-coding upstream 15271 8372266 ~ 8372551 (+)
G60109 NA non-coding upstream 60869 8325053 ~ 8326953 (+)
G60080 NA non-coding upstream 74709 8302258 ~ 8313113 (+)
G60084 gcn1 non-coding upstream 149034 8232004 ~ 8238788 (+)
G60082 NA non-coding upstream 160649 8226892 ~ 8227173 (+)
G60147 NA non-coding downstream 28524 8417642 ~ 8417850 (+)
LOC120560009 NA non-coding downstream 39835 8428953 ~ 8431230 (+)
LOC120560008 NA non-coding downstream 45623 8434741 ~ 8437598 (+)
trnaw-cca_2 NA non-coding downstream 55336 8444454 ~ 8444525 (+)
trnaw-cca_3 NA non-coding downstream 56500 8445618 ~ 8445689 (+)
cux2b cux2,LOC102795992 other upstream 336482 7947252 ~ 8051340 (+)
atp2a2a atp2a2,LOC102794349,LOC101476777,LOC102310403 other upstream 509451 7847671 ~ 7878371 (+)
zbtb26 LOC104940087,LOC100710858,LOC102306976,LOC102206222,LOC101473380,LOC102792103 other upstream 757642 7625736 ~ 7630180 (+)
susd1 susd1 other upstream 764107 7600092 ~ 7623715 (+)
LOC120560567 ier3ip1,yee9,LOC103361062,LOC100710589,LOC107393509,LOC105014506,LOC103152384 other upstream 811686 7574725 ~ 7576136 (+)
LOC120560006 NA other downstream 34071 8423189 ~ 8427745 (+)
LOC120560007 NA other downstream 42419 8431537 ~ 8434672 (+)
vps37ba vps37b,vps37c,LOC102776795 other downstream 602323 8991441 ~ 9014903 (+)
ppp3cca LOC104934810,LOC100705072,LOC105915415,LOC101486266,LOC102777092,LOC103366803,LOC102200614,LOC101072650,LOC106932221 other downstream 628773 9017891 ~ 9055765 (+)
LOC120560959 golga7,LOC104937560,LOC106585131 other downstream 1537832 9926950 ~ 9981054 (+)

Expression


Co-expression Network