LOC120560871 (ccng2,LOC102294549,LOC100696397,LOC102783398)


Basic Information

Item Value
gene id LOC120560871
gene name ccng2,LOC102294549,LOC100696397,LOC102783398
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 29036015 ~ 29040829 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039803750.1
ATTTACGCTAGcctagcaagctaacgttagctaagttAGTTAGCTATTTACATTAAATTTGTGACGTCTGCAGCTTTTTGGCATTTATAGCTAGTTGTTGTTTACCCCGAACGTATATTTCAAGAGGCGAATACAGTTAAAAGCCTAGTTACATCTATTAATTCAACCTCTTATGAAATGTTATAAGGTTTATAGTAAACCTGTTATGAATGATTAACTTGGGTGACCTAATTTCTGTTCAGTAAACATTTAGCTAACGTCACTTTAAAGCTAGCCCAGACTACATTAACTTTGCTTTTGTGAGTGTTTAATTATTTTTGCTTAAGCATATTTTTGTACAGTATTGACATTAATCAGTGTATTGTAACAACTGTGTTATGATTAAATAGGTTCAGGAATGTGTAGTTTTTGAGCGGTGGGGGGGATCTTCCACTGATATGTGACACCCAGTAGGTGTGGTTTTGGAGACAACATTTGTAAGCCCCCCTCGCTCTACTTGGGGAAACAGTTGTTGTGACCTTTTGTTTGCATGCAATGCAGAGCCatttaaatatgttgttttcCAGGATGAGGGATCTTCAAGCCATTGACAGCTTGCTCTTGAAAGAGTTAAAGTCATGTCGTGCAAACGAGTACAACTTTCTTCCCAGAGAGGCTGGCCTGAAGCTGATGGAGTCGGCTTCCACAGAGAATCACAGTGGAGTGTCTGCAAAATGCAGAGACACCAGAGTGGAAGAACTGTGGGGCCTGACCAGTTTCTTTGGATACAGCACACAAACGTTTGTTCAAGCTGTCAATTTGCTTGATAGATTCCTCTCCATTATGAAGGTGCAGCCCAAACACTTGCCTTGTATTGGAGTCTGCTGTCTTCACATTGCAGCGAAAATGGTCGAGGAAGAGAACAATGTCTCACCTACGCGTGAACTCATCCGCATCAGCCAAAGCAAGTTCACTGTGTCAGACCTGTGTCGTATGGAGAAGATCATCtcagagaagctcagtgtggaGCCCAAAACAGTGACAGCCTTAACCTTTCTACACCTCTACTACTCAGCCTTTACATCCCTATCTGCTAGAagGGAGGAGATCCCAAGCATTGGGAGACTGGAAGCCCAGCTAAAAGCCTGCTTATGCCGGCTTGTTTTCTCTAAAGCAAAACCATCAGTGCTGGCGCTGTCCCTCATTGCTCAAGAGTTTGAAGCCCTCCAGTCCATCACCTTGTTGAAGATTGTACAGCAATTCCAAAGACACCTAAAGATCAGCGACAGCGAGTTGCTCcactggaaggaacttgtgGCCCAATGCATGACTGAATACTGCTCAAGCGAATGTAATAAACCAGACAACAAAAAGcttgtttggatcgtttccaggaGAACGGCACAGAATCTTCAGGCCAATCACTTCAGTGTGCCTGGCCTGCCAACTATTCCTGAGGGGAGCTGGGATGAGAGTGAGAGTGAGGACTCCTGTGAGGACATGAGCTGTGGAGAAGACAGCCCATGCGGCTCGCCAGGAAGTGACGGCGAAGGAGCCTTCTTCCCCTCCGCCTTTCTCAATCGCAAAAAGTGACGAGTCCTCATTGTGCAGAAAGGACAGATGTGTATTTGTCCCCTGATCTGATTTAGGGTGGTCACCGTGTTTCTGAGAAAACCTGTTTCACTTGTTTTACCACTGTATAGGTACCACAAGTGACAGGTTTCAATCAAGTGCCTGTTgattcagtttactgtctgtctctttaatgttaaaaaaaacaacatatcttATAAATGCAAAATGGAAAATTGCAATATCTTGGCAGCTTGATGGCAATGCTTCTGAATATCTTCTTCCAAGATGTCCTCTTTGGGTTCGTTTGTGTCCGAGCCGGCACATTCCAGGAAAAGCAGTGAAGCACAACCTAGAACTTGTGTATGTCAGTCGTGAGGTATGCTCACTGTTGAATAGTACCAGCTAACACACTAGCACATcctcaatcttttttttaaaacctgttTTTATACTCCGTACCATACATATAGACAGTATTCTGCAAGCGTATGTTATACGTATGTACACAATCCTAATGTGACATATAGGACATTGTTGTGTGAAATTATCAGACTGTATATGCATGGATACATTGAAATATGTGATTATGAATGGATTTTGTCTGTTTACCAAAATAAgcttactgtaaaaaaaacgtttaaaaaaaatgtatataacatgtaaaaaaatttTACGTTTTGTGAATGCTACATAATGTGTGTTGTATTTGGAAATAATGTGGATGTTGGAAGGGTCAGAATTAATCCTtccaaataattaaaaaaaatctttttatctaccacattgttttctgtttcagttcACTTGTTTTTGAATTGTCCACCAGTGGTGGACTAGGGCGTTGCCTAAAGTTATTTTTAATGTTCACACTTGTATTTAAACTGAATTCTGTCTGACCAGCGATCAGTATGGGTCAAGAAGAGTATTGTCATTGATCATGTACGTTGACTCTTTGAGACCAGCCTGAAACACTGATTTATTCTGGTTCATTTGAGTGGTTTAAATGACATATACCGAAGAACTGTAACATCAGCGGACTTTTATTCCATAAAAATATACGTGTTAAGAATTACTTAAACAACAAACATGGCCGTGAGAAACACATTCTTAAGTGATGGAAATCCGTGCATGAAACCCTCAGGAGTCCTGCATTAGTTATGTGTTCTGGATCTTGTTTTGTATGATGGAAGAAGTACTCTAGGTTAGCAATACCATAAGTGTAAAGTGAAAGTATTGtattaaaattttaaaagaa
>XM_039803751.1
GGACCCTCTCTTTTTTCAGCAGGGATCAaggattttgtttttaacatattCCGACCATCATCATAATCAAAATGGAAACATGAAGAACTGAAAAGTGTAATTAAGTTGCAGCGCTATTATTATCCTGCACGTCGGCAGCTTCTTGACAAGGATGAGGGATCTTCAAGCCATTGACAGCTTGCTCTTGAAAGAGTTAAAGTCATGTCGTGCAAACGAGTACAACTTTCTTCCCAGAGAGGCTGGCCTGAAGCTGATGGAGTCGGCTTCCACAGAGAATCACAGTGGAGTGTCTGCAAAATGCAGAGACACCAGAGTGGAAGAACTGTGGGGCCTGACCAGTTTCTTTGGATACAGCACACAAACGTTTGTTCAAGCTGTCAATTTGCTTGATAGATTCCTCTCCATTATGAAGGTGCAGCCCAAACACTTGCCTTGTATTGGAGTCTGCTGTCTTCACATTGCAGCGAAAATGGTCGAGGAAGAGAACAATGTCTCACCTACGCGTGAACTCATCCGCATCAGCCAAAGCAAGTTCACTGTGTCAGACCTGTGTCGTATGGAGAAGATCATCtcagagaagctcagtgtggaGCCCAAAACAGTGACAGCCTTAACCTTTCTACACCTCTACTACTCAGCCTTTACATCCCTATCTGCTAGAagGGAGGAGATCCCAAGCATTGGGAGACTGGAAGCCCAGCTAAAAGCCTGCTTATGCCGGCTTGTTTTCTCTAAAGCAAAACCATCAGTGCTGGCGCTGTCCCTCATTGCTCAAGAGTTTGAAGCCCTCCAGTCCATCACCTTGTTGAAGATTGTACAGCAATTCCAAAGACACCTAAAGATCAGCGACAGCGAGTTGCTCcactggaaggaacttgtgGCCCAATGCATGACTGAATACTGCTCAAGCGAATGTAATAAACCAGACAACAAAAAGcttgtttggatcgtttccaggaGAACGGCACAGAATCTTCAGGCCAATCACTTCAGTGTGCCTGGCCTGCCAACTATTCCTGAGGGGAGCTGGGATGAGAGTGAGAGTGAGGACTCCTGTGAGGACATGAGCTGTGGAGAAGACAGCCCATGCGGCTCGCCAGGAAGTGACGGCGAAGGAGCCTTCTTCCCCTCCGCCTTTCTCAATCGCAAAAAGTGACGAGTCCTCATTGTGCAGAAAGGACAGATGTGTATTTGTCCCCTGATCTGATTTAGGGTGGTCACCGTGTTTCTGAGAAAACCTGTTTCACTTGTTTTACCACTGTATAGGTACCACAAGTGACAGGTTTCAATCAAGTGCCTGTTgattcagtttactgtctgtctctttaatgttaaaaaaaacaacatatcttATAAATGCAAAATGGAAAATTGCAATATCTTGGCAGCTTGATGGCAATGCTTCTGAATATCTTCTTCCAAGATGTCCTCTTTGGGTTCGTTTGTGTCCGAGCCGGCACATTCCAGGAAAAGCAGTGAAGCACAACCTAGAACTTGTGTATGTCAGTCGTGAGGTATGCTCACTGTTGAATAGTACCAGCTAACACACTAGCACATcctcaatcttttttttaaaacctgttTTTATACTCCGTACCATACATATAGACAGTATTCTGCAAGCGTATGTTATACGTATGTACACAATCCTAATGTGACATATAGGACATTGTTGTGTGAAATTATCAGACTGTATATGCATGGATACATTGAAATATGTGATTATGAATGGATTTTGTCTGTTTACCAAAATAAgcttactgtaaaaaaaacgtttaaaaaaaatgtatataacatgtaaaaaaatttTACGTTTTGTGAATGCTACATAATGTGTGTTGTATTTGGAAATAATGTGGATGTTGGAAGGGTCAGAATTAATCCTtccaaataattaaaaaaaatctttttatctaccacattgttttctgtttcagttcACTTGTTTTTGAATTGTCCACCAGTGGTGGACTAGGGCGTTGCCTAAAGTTATTTTTAATGTTCACACTTGTATTTAAACTGAATTCTGTCTGA

Function

symbol description
ccng2 Predicted to enable cyclin-dependent protein serine/threonine kinase regulator activity. Predicted to be involved in mitotic cell cycle phase transition and regulation of cyclin-dependent protein serine/threonine kinase activity. Predicted to act upstream of or within regulation of cell cycle. Predicted to be part of cyclin-dependent protein kinase holoenzyme complex. Predicted to be active in cytoplasm and nucleus. Is expressed in endocrine system; nervous system; neural tube; pronephric duct; and somite. Orthologous to human CCNG2 (cyclin G2).

NR:

description
PREDICTED: cyclin-G2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039803750.1 True 2809 mRNA 0.40 7 29036184 29040829
XM_039803751.1 False 2034 mRNA 0.42 8 29036015 29040470

Neighbor

gene id symbol gene type direction distance location
zgc:158260 NA coding upstream 19090 29013606 ~ 29016925 (+)
LOC120560307 LOC103366435,LOC100706955,LOC101475748 coding upstream 56529 28963413 ~ 28979486 (+)
LOC120561296 LOC104963268,LOC101073255 coding upstream 80187 28940542 ~ 28955828 (+)
hint2 hint2,LOC102195764,LOC100691034,LOC101473821 coding upstream 97373 28934966 ~ 28938642 (+)
emb NA coding upstream 108167 28918006 ~ 28927848 (+)
LOC120560378 st8sia3,LOC104919001,LOC100693561,LOC102785111,LOC102199258,LOC101477372 coding downstream 1111 29041940 ~ 29050224 (+)
zgc:152968 NA coding downstream 19918 29060747 ~ 29072167 (+)
ptgs1 LOC103362336 coding downstream 162664 29203493 ~ 29214795 (+)
LOC120561007 NA coding downstream 180025 29220854 ~ 29223680 (+)
pmpca pmpca coding downstream 201893 29242722 ~ 29248901 (+)
G65473 NA non-coding upstream 33835 28985613 ~ 29002180 (+)
G65418 NA non-coding upstream 219615 28816185 ~ 28816400 (+)
G65417 NA non-coding upstream 220539 28815254 ~ 28815476 (+)
G65396 NA non-coding upstream 269790 28766020 ~ 28766225 (+)
G65394 NA non-coding upstream 279822 28755865 ~ 28756193 (+)
LOC120560778 NA non-coding downstream 32112 29072941 ~ 29131216 (+)
G65565 LOC108233773,LOC103375797 non-coding downstream 37597 29078426 ~ 29098313 (+)
G65570 NA non-coding downstream 63159 29103988 ~ 29105609 (+)
G65710 NA non-coding downstream 506620 29547449 ~ 29614880 (+)
G65713 NA non-coding downstream 548178 29589007 ~ 29591364 (+)
mboat4 NA other upstream 186544 28845626 ~ 28849471 (+)
G65084 lipg other upstream 1665056 27205234 ~ 27370959 (+)
ndufs4 ndufs4 other upstream 1996416 27012210 ~ 27039599 (+)
si:dkey-178e17.1 slc25a1,LOC100697273,LOC101470788,LOC103359526,LOC102784907,LOC107394264,LOC103145904 other upstream 2374120 26644661 ~ 26661895 (+)
cltcl1 LOC100691387,LOC103359525 other upstream 2391848 26614237 ~ 26644167 (+)
ubac1 ubac1 other downstream 303751 29344580 ~ 29351756 (+)
fbxo21 fbxo21 other downstream 1146019 30186848 ~ 30212108 (+)
LOC120560820 NA other downstream 1206058 30246887 ~ 30251519 (+)
G65899 taok3 other downstream 1533257 30574086 ~ 30578159 (+)
LOC120561064 NA other downstream 1816751 30857580 ~ 30893280 (+)

Expression


Co-expression Network