nol6 (nol6)


Basic Information

Item Value
gene id nol6
gene name nol6
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 16531652 ~ 16546472 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039803786.1
CACCGCCTCTACACCAATCAGGGAAATATTTTGCATGCTAGCGTGCTTGACTGACCCATTGCACATGTGAGAGCGCAATGCAGGGAAAGCGGTGTTGATCAAAACTTTTCAAAAATATCGGAATTGTCATCGCATTGAAAGCAAATACGACATGAAAAAGAAGCAGGCAGTTGCCGAGGACCCAGCGGAGATGATTCCCTCAGAGAGTCGTGAGGAGGAAAATGAGGCTCCCGTTAAAGTCAAAAGGAGCAAAACCGAGGAGGTGGTCTATCACCCGGTGAAGCTGTCCCGAAGTGATCTCTACAGACCTCCTACAGCGGAGGAGCTAAACCAGCTCAAAGAGGCGGAAAGCCTGTTTCACTGCAGCTTGCTCAAAATGCAGATGGAAGAGCTGCTGAAAGAGGTCGCCCTGAGTGAGCGTAGGAAACAGCAAATTGATTCCTTCATTCAGACCGTCACCAAGCTGCTCCGGACTGTACCCGAATCCCCAGAGGTTGAGgTAAGTGACCTGTCATGGCTGTCTAGTGCAGTTAAGGTCCCGTTCCTCCTGGTGCCCAAAACAACAAAGGGAAAGTTCCACATGACACCTCCGGCTTCTGTTGATCTGATCGGCAGCTACCCCCTGGGCACATGCACCAAACCACGCGTCATGGTGGACCTGGCTGTCACAATCCCAGCTGATGTCCTCCACCCAAAGGACGTCGTGAACCAGAGGTATCCGAGGAAAAGGGCTCTCTACCTGGCGGGCCTGGCCCAGTATCTCGCATCCTCCTCTGACATCGGAAGCATGCTTTATTCCTGTCTCCATGGCAATCGACTCCGACCTGTTCTACTGCTGACCCCTCCGGGTAAAGACTCTTCCAGCTTCACTGTCCGTGTTCATGCCTGTCCGCCTCCTGGATTCTTCAAGCCCAGCCGTTTCCACCCTCAGAAGAATAACATCCGGACAGAGTGGTACACCGGATTGCAGACCTCCCAGTCTGAGAGCAGCGAACCGCCCACTCCACATTACAATAGCTCTGTTCTGGGGGATTTACTGCCCAGGGCCCACCTCCAGTTTCTTTCTGCTGTCAGCTCCCAGTGCTCAGCTTTTGCAGATGGGGTGGCTTTGCTCAAAGTCTGGCTTCGACAAAGAGAGCTCCACCAGGGCACTGGCTGTTTTAATGGCTTCCTGGCTTCAATGCTGATTGCTTACCTGCTGACCAGTCACAGAATCAGTAACTCCATGACAGCCTATCAGCTGCTTCGAAACACCTTGAACTTCCTGGCATCTACAGACCTGACAGTGAATGGAATTAGCCTAGCCAAAGATCCTGACTCTACAGCTCCACCTCTTGCAGAGTTCCACGATGCTTTCCAGGTCGTATTTGTCGACCCTTCAGGACATCTCAACATGTGTGCTGACGTGACCGCTTGTACCTACAAACAGCTGCAGCACGAGGCCTCTGTGTCGATGCAGTTCTGGGACAACCCTACGGTGGACGGGTTCCACAGCCTCCTCATGACACCTAAACCCATGATAAGGACAAGCGACCACATATTCCAGTTATGTGAGCTGGTGAAGCTTCAGTCCAGCTGCAAGAAACTGAATCTCCTCAGTGAGCTGATGGACCACAGTGGAAATTACGTCCACACGGCGCTCCCTTATATCCTGTCGCTGCTTCAGCGAGGACTGGGCCAAAGGATCCACCTCCTCAcccactccctctctcctgaCCCTGAGtgGTCTGTGGAGAGTGAAGCCCCGAAACACAAAGCCCAACCTCCTCTCTCCTTCGGCGTGCTCTTAATGCCGGAGCTGGCAGCCTCTGCCCTGGACAGAGGCCCGCCCGCAGATAGCCCCAAGGCGGCTGAGTTTCGTCAGCTGTGGGGCTCTCGCTCCGAGCTGCGTCGATTTCAGGACGGCGCCATCACCGAGGCTGTGCTGTGGGACGGAGAGAGCATGTGCCAAAAACGTCTAGTCCCCAGACAGATCATTACACACCTGCTACAGCtGCATGCAGATATCCCCGAATCCTCCGTGAGATATGTTGGGGCGATGGTGGATGACGtcatcaaaacaggaagtgagCTGCCTAGCACTGGAGAGGAGGAGAGTTTACTGGTGGTTCAGTCCTATGATGACCTGAGCAGAAAACTATGGAGGTTGGAAGGTCTGCCTCTCTCCATCACAGCAGTGCAAGGAGCACACCCTGCACTCAGATATACACAGGTCTTTCCCCCTCTGCCACTGAAGCTGGACTATTCCTTCTTTGACAGAGAAAAGACTTCCAGATCATTGGTGCCGAAGGAAGGCAAACCCTGCCCTGCATATATCACCCCTATCACAGTAATCTGTCACATGGAGGGGAGCGGAAAGTGGCCTCACGACCGCCTCGCCATCCGACACATCCGAACTGCCTTCCACATCCGTGTGGGAGAGTTACTCAAGAAGCACCATAATTATACGTGCAGGCCCTGTCCCACACACCTAGATGTCTGGAAGGATGGCTTGGTGTTCCGCATCCAGGTGGCATACCATCGTGAGCCTCAGGTGCTAAGGGAGAGTGTGAATGCCGAGGGCCTGCTGGTTGTAAGGGACAACGAGGAGGCTCAGGCTCTGGAGATGGCCACCATTCACAAGCCTCTACTTACCAGCACATTACAtgggctccagcagcagcacccATGTTTTGGGGCGGTGTGTCGCCTCGCCAAACGCTGGCTGGGGGCTCAGCTCTtcagtgatgacatcacagaGGACACAGCAGACCTGCTGGTGGCGTCGCTTTTCCTGCAGCCTGCACCCTTCACTCCACCAGGTTCTCCTCAGGTCGGCTTCCTTCGTTTCCTTCATCTGCTCTCCTCCTTTGACTGGAGGAACAACCCGCTGGTTGTCAACCTCAACAACCAGCTCGCAGCCACCGACTACACGGAGATCAAGAATGACTTCACTGCCACCAGGGAGTCTCTGCCTGTCTTGTTTATAGCTACGcctaaagacaaaaaacaatccATTTGGACCAAACGAGCACCTAGTGTACAGATTCTGCAGCGTGTGGTGATGGTGGCTGCAGAGAGTCTTAAGTTACTGGAAAATCAGCTGATGGACAGCAACCAGATACAAGATGTCAGGGTGGTCATGCGCCCTCCTCTGGATGCCTATGATGTGTTGATTCACCTGAACCCCAAGCAGGTTCCCCTGCTTGTTCAGGCAGTGGACCCCCCCACTGTCACCTTCAGCAGGGGCATCATGGCTGGCAATGTGACCCAGTCTGGAGGGGCCCTGCCCGTCATCGACTACAACCCCGTGTCCCTCTACATGGCAGAGCTCAGAGTGAGTTTTGTCTAAACTTACGGTTAAAAG

Function

symbol description
nol6 Predicted to enable RNA binding activity. Predicted to be involved in rRNA processing and tRNA export from nucleus. Predicted to be located in membrane and nucleus. Predicted to be integral component of membrane. Predicted to be part of CURI complex; UTP-C complex; and small-subunit processome. Orthologous to human NOL6 (nucleolar protein 6).

NR:

description
nucleolar protein 6

GO: NA

KEGG:

id description
K14544 UTP22, NOL6; U3 small nucleolar RNA-associated protein 22

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039803786.1 True 3346 mRNA 0.54 24 16531652 16546472

Neighbor

gene id symbol gene type direction distance location
aqp3a LOC103362379,LOC108242818 coding downstream 12336 16512377 ~ 16519316 (-)
nr2f1a nr2f1,nr2f1a,LOC107671052 coding downstream 398706 16124488 ~ 16132946 (-)
slf1 slf1 coding downstream 720232 15777243 ~ 15811420 (-)
fam81b NA coding downstream 897146 15622929 ~ 15634506 (-)
LOC120560939 NA coding downstream 909424 15615792 ~ 15622228 (-)
LOC120561320 NA coding upstream 809 16547281 ~ 16548567 (-)
LOC120560423 rasa1 coding upstream 476066 17022538 ~ 17055682 (-)
LOC120560528 vcan,LOC102793126 coding upstream 936168 17482640 ~ 17535168 (-)
LOC120561237 NA coding upstream 1068669 17615141 ~ 17618859 (-)
f2r f2r,LOC100706519,LOC102798097 coding upstream 1168064 17714536 ~ 17718413 (-)
LOC120561369 NA non-coding downstream 23401 16507046 ~ 16508251 (-)
G62065 NA non-coding downstream 25530 16505270 ~ 16506122 (-)
G62001 NA non-coding downstream 389971 16117227 ~ 16141681 (-)
G61998 NA non-coding downstream 431269 16096421 ~ 16100383 (-)
G61996 NA non-coding downstream 548241 15982876 ~ 15983411 (-)
LOC120561239 NA non-coding upstream 16998 16563470 ~ 16564460 (-)
G62103 NA non-coding upstream 63101 16609573 ~ 16663861 (-)
G62104 NA non-coding upstream 64005 16610477 ~ 16620203 (-)
G62114 NA non-coding upstream 129220 16675692 ~ 16686359 (-)
LOC120560958 NA non-coding upstream 197813 16744285 ~ 16745598 (-)
G62064 NA other downstream 26585 16504626 ~ 16505067 (-)
LOC120560105 LOC103362503 other downstream 79164 16152420 ~ 16452488 (-)
LOC120560838 NA other downstream 1129328 15369026 ~ 15402324 (-)
mfsd14bb LOC103398013,LOC102210719 other downstream 1253468 15252615 ~ 15278184 (-)
LOC120560831 NA other downstream 1298959 15224970 ~ 15232693 (-)
LOC120561322 NA other upstream 2145 16548617 ~ 16551175 (-)
LOC120560425 NA other upstream 537007 17083479 ~ 17085821 (-)
G62194 NA other upstream 577524 17123996 ~ 17124477 (-)
G62209 hapln1,LOC103373858,LOC106939955 other upstream 931834 17478306 ~ 17480814 (-)
LOC120560614 NA other upstream 988011 17534483 ~ 17568014 (-)

Expression


Co-expression Network