LOC120560896 (LOC103362386,LOC102790232,LOC102295658,LOC102208013)


Basic Information

Item Value
gene id LOC120560896
gene name LOC103362386,LOC102790232,LOC102295658,LOC102208013
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 16537126 ~ 16540185 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039803788.1
atgaCGTCATCCACCATCGCCCCAACATATCTCACGGAGGATTCGGGGATATCTGCATGCCTGGTGGATAATATatagtttattttctttttttaaacgaggcttcaaaaaaattaatacATACATTCACCTCACTGTAATTTAATGTAGGTAAAACTGGTCCCAAATTGGCTTTTTTTTGCGACGAGAGTCggcgctaacattagctaacggttaacgttagctttgtaaaaAACAGTTTCAGACATCAGCACGACAAGATGAAACGCATGGGGAGGAGACGGAGCTCTGTGTGGGACTGCTTTGAACAAGTGAACAACAACTTCGTCCGCTGCATGAAATGTGACGCTACGCTGAAGTACTGCGGCGGCGCCACTAGCTCCATGATCAACCACATGAGCAGGCACCATCCGTCCACGGCGCCGCTGACGTCGGACGAAGACGAGAAACCGGTGATTTGTAACGTCACCGTGCAGTGCGCTGAGGAGGAGAGCACCGCTAACTCGGACATCATGCAGGTTGCCATCATGTCACCCAACATGAACATGACTACCAACCTCCCTGAGCGTGAATACGGAGAGAGGAAGCGCCTGAAGCGGAGCTCCGTGTGGGACATTTTCATTAAAGTGGACGACGAGGTCCACTGCACGATGTGCGACACAAAGCTGAAATACAGGAGCAGCACTACCAGCATGATGTACCACATCAAAAATAAGCACCAAGACACCATGCCCAATGACGGCGTGCCACTTGCAGCACAAGCAGAGGTGACTGAACTTATCTCCAGAATGATAGAGAAGGACATGCTTCCCATTAGCGTGATTAGTGGTGATGGTTTTCGTGAGCTTCTTGCATACACTGTGCAAAATTATAAAATGCCATCTGTTGGCGATGTCACACGCCTCATTGAAGGCCATTTCCATGAGAAGGTAGAGGAGCTTGTAGCACAGCTGGGTAGAGTGGAGAAAGTGGCTCTCACCGCTGACTTCTGGACAGCCCTCCCATTTCAGAGGTACATCACAGTTTTCTGTTCAttcataacagaggagtggcaGGGGAGGTCAGCTGTGCTGCAGACACACAAGCTACCATCAGACAGCCACACTACCGCAGGCAGTGTCACAGAGAGGCTCCTTAAAACTGTGCAAACCTGGGCTATTGGTGGGAAAGTGACCGCATGTGTTCATAACAACACGCAGGGCATCTTGTCCGCCCACGCATGTGCCCGTGTCACCTGGGACTATGCCACTTGCTTTGCCACTACGTTGCAGCTAGCAGTCAGCGATGGGCTGAGTGAGGATCTAGTCCGCATCATTGTTGCTGCTGGGAAACTAGTCAAACACTTCAATCACAACTTGCTGGCAAGTGAGGCCTTGGCGCAGAAGCAAGTTCAGATGTGCCTGCCACAGCACAAGCTTATCCAGTCGAGCAAAGCTAGATGGGACACGATCTGCGATATGTTCGAAAGGTTACTTGAGCAACGGTGGGCAATTAAAGCGGTGCTCTCTGATCGCACAACCACCAACAGGCAGGAAGCTCAAATCCTCGAGATTGAAGATGACTGCTGGCAAATAATTGAGAATTTTACACCTGTGCTGGCAACGCTGAAATGGGCAACAACagtcatatctgctgaaacaGAAGTGTCCATTTCTAACATCTACCCGATCACGTTCAGCCTCATTCAGACCCATCTTGTGCCAAAAGAGAATGACGTTGAACAAGTCTCAGAGTTCAAGCTGAAAGTTCAGAAGTCACTTAGAAATCACATGGAGGTTGACTCTAATGACCTAGCCTCCAAACCCGCCCTGATCGCCTCTATGCTGGACCCTCGTCACAAACATCTCAGCTTCCTGACGCCAACGGGGAGACTGGCTGCAAAGGTCAAACTGCATGAACTGGTTTCCAGATTAGATGTGATAACTACTACAGTGGGCACAAAGGATGAACAGCAGGAGATCCTGGTTACCCCCGATATCAGCCAGGTGGCTGTTCCTTCGCAACTGAGAAGTGACACCAAAAACACCATGATGTTGCTCCTGGGAGACAACTACAGCTCCTCCTATGCCACAGACTCTGAGGCTCAGGTAGATTACTACTTAAGAGACATTGCTCCCTCATTGGACATAAACCCTCTTGACTGGTGGAGGGTAAATGGACCAAGATTCCCCAAGCTAGCCACTCTGGCAAGACACTATTTATGTGTACCTGGTGTATCACTGCCATCTTTACTGTCGGAGGCTGGACAAACATTTGCAACAATGCGAACAAGATTGAGCCCAGAACATGTTGACATGATGATCtttgtaaacagaaatgcatAACTGCTAACTAGGGCTCCCCAGAAAGCCACGCTGTAATTCAAATGCTGTGAATTTACCAtgcatgtaatgttttttttttttttgtgaaaatgtaCAGTATCTAATAGTAAAAGTATCTATGATGTAATTCTTTTTATTACACAAAATCTAAGTGTTATTCCTTCATTTAGTGCATAGATTTCAAAGTTGGCAGAAAACATTTCTGAGtggcagacaaaaaaaaaaaaaaaaggttaatttCAGAACCTGTTTTTAGTGTAGTGCTTAAAATCCGGACCGGACAGCAAGTTGATCCGGACCCAGCCCGGACCTCTTGCTATGAATACAATACGTTATTTGTCTCATCATCTCATCTGACTTGATGGCTGAAACTCGTGGCTTCCAGCTGATGTGAGCAATATCTGAGTAAACACGCGGTCACTATACAATCCTTGGTATTCAAAATCAAACATTAGGCTTACCCAAGCAACAAGTAGAGACTGAATAGATTGAATACATTTCTTTCCAATAGTCCtcaaataagaataaaaaacaaTGAAGTAAA

Function

NR:

description
PREDICTED: zinc finger BED domain-containing protein 4-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039803788.1 True 2868 mRNA 0.46 2 16537126 16540185

Neighbor

gene id symbol gene type direction distance location
LOC120561368 LOC104951926 coding upstream 32390 16495235 ~ 16504736 (+)
LOC120561387 NA coding upstream 44491 16487394 ~ 16492635 (+)
LOC120561386 NA coding upstream 53097 16477498 ~ 16484029 (+)
LOC120561380 NA coding upstream 69150 16461238 ~ 16467976 (+)
kiaa0825 kiaa0825 coding upstream 598273 15811685 ~ 15938853 (+)
wdr54 wdr54 coding downstream 10065 16550250 ~ 16554512 (+)
rhobtb4 LOC103362416,LOC103470451 coding downstream 32143 16572328 ~ 16616256 (+)
si:dkey-40c11.2 LOC104955420,LOC104955419 coding downstream 88336 16628521 ~ 16663697 (+)
mef2cb mef2c coding downstream 284630 16824815 ~ 16895188 (+)
tmem161b tmem161b coding downstream 419272 16959457 ~ 16978395 (+)
G62033 aqp3,LOC103362379,LOC107393848,LOC105031174 non-coding upstream 23083 16512171 ~ 16514043 (+)
G61975 NA non-coding upstream 338255 16123200 ~ 16198871 (+)
LOC120560394 NA non-coding upstream 394327 16134594 ~ 16142799 (+)
G61968 NA non-coding upstream 480421 16035451 ~ 16056705 (+)
G61970 NA non-coding upstream 486433 16048383 ~ 16050693 (+)
G62082 NA non-coding downstream 27297 16567482 ~ 16567714 (+)
G62085 NA non-coding downstream 70292 16610477 ~ 16620136 (+)
LOC120560795 NA non-coding downstream 356403 16896588 ~ 16943176 (+)
G62126 NA non-coding downstream 412740 16952925 ~ 16953637 (+)
G62184 NA non-coding downstream 537718 17077903 ~ 17084516 (+)
LOC120560897 LOC105925468 other upstream 2951 16532916 ~ 16534175 (+)
LOC120560890 NA other upstream 61221 16468310 ~ 16475905 (+)
fam172a fam172a,LOC102785942 other upstream 437642 15943698 ~ 16099484 (+)
mctp1a mctp1,LOC102782783 other upstream 759985 15636798 ~ 15777141 (+)
LOC120560526 NA other upstream 1004330 15518780 ~ 15532796 (+)
LOC120560947 edil3 other downstream 745463 17285648 ~ 17414595 (+)
tmem167a tmem167a,LOC103397084 other downstream 1027828 17568013 ~ 17572705 (+)
cmya5 cmya5,LOC106958347,LOC104953151 other downstream 1458501 17998686 ~ 18011030 (+)
thbs4a thbs4,LOC104953147,LOC106958346 other downstream 1475220 18015405 ~ 18029386 (+)
setbp1 setbp1,LOC102781608 other downstream 1534583 18074768 ~ 18129069 (+)

Expression


Co-expression Network