anapc5 (anapc5,LOC102800026)


Basic Information

Item Value
gene id anapc5
gene name anapc5,LOC102800026
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 2560749 ~ 2577050 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039803790.1
GCTGTATGTAGCTAATACACCAAGAAGAAAAAGCAGAAGGAGGGCAGTTTGAAAGCAAACTTGGCAACTTCTGTCAACATGTAAATAAACCAAATTAcctgacaagaccaaagtgagcGTTCACTGTCAGTAAGATTctgttttttgcaagttagCAGAGACTAACCGTTGATGTTTTATTGCCGTCTTCTcgggactagctagctagctagctaacgttaaatacaCTTggaacgctagctagctaacgttatgttagctgctgctgctgctgctggctggtCTTTAACTTTTATTTCCGCTAAATATTGACCCAGTGTACCTCAACATTGGCTTATTTAATCGCCGTAGCCTAACACAACCTGTCAAAATGGCGAGTGTGCATGAAAGTTTGTATTTCAACCCTATGATGACGAACGGAGTGGTCCATGCTAACGTGTTTGGTATCAAAGACTGGGTGACTCCGTATAAAATCTCCGTCCTGGCGCTGCTGTACGACATGACTGCGTCCAAAATCACACTTCCAGAAAGGAGACGACTTAACAAACTCATCCTGCCCTTGCAGCAGGGTCCAGACCTGACTCTTGGCCAGTTCCTGAAGACTGTGGAGGAATGTTGCCCTCAGACTGCATATGCTGTCAAACTCCGGCTGCATGAAATGGCAGACGGAGAGCTGAAAGACATGGAGTACTTCTTTTCCACTCTTCCCACTCCATTCTCTGCTTTTGATTCAGAGGCTTATAAAACCAGTGTCGTGGgtCTTTTCATGAGACACATGCTCCTGGCCTACAACAAGCTGTCTTTCAGTCAGGTCTACAAGCTGTACAAGTCCCTGCAGCATTACTACCACAGTCACTACGCCAAGCCTACCGATGGCCAGGTGAGTTTGCCAGTGCTGGTTGCTGACGATTCCGACATGGACCTCACCAGCACAGAGGATACTGTCGGGGACAGAATAGACAGAGAGGAGTTGGACACCCCGCTGCACGAGTCAGAGCTTCGAAATGACAATACTCCGAGCAGAGGTCCCCTGTCACAAAAACAAGCGGAGTACTTTCTTGCAAGACAGGCATATCTTCTCAAGAACGACGAGAACAAAGCCCTGAAGCCGGCTGCGCTGCAGGAAGAGCTCAACAACATGCTGAAGTTCAACCCCGATTTTGCTGAGGCGCATTACCTGAACTACCTGAACAGCATGAGAGTCCAGGACATCTTCCTCTCCGCCCACAGTCTCTTGCATTATTTTGACCGCCTCATCTTGTCTGGAAGCGAGGGAAAGAGCAACGGGGACGAGGGCTACGGCCGAAGTCTCCGCTACGCTGCTCTCAACCTGGCAAGCCTGCACTGTCGCTTTGGCCACTATCAGCAGGCTGATCTGGCTCTACAGGAAGCTATCCGCATTGCCCAGGAGTCCAATGATCATGTGTGCTTACAGCACTGTCTGAGTTGGCTCTACACATTGGAACAGATGAAGGGATCTGACAGCACTGTGTTGACTGAGGACTCTGTGAAAATGGCTGCCCATTTCTGCCTGCCATACCTGGCATCTCTGGGCATTCAGTCTCtggtccagcagggggcgacacagGGTAAGACGGCCCACAAACTGATGGATGCACTGAAGGACACGGACATCCTGCACTGGAAGCACAGTCTGTCGGAGCTGATCGAGATCAGCCTGGCTCAGACTACGTCCATATGGAGGATGTTCGGCAAGAGCACCATGGCTCTGCAGCAGGCCCAGCTGCTTCTCAACATGAGCAGTCTGGAGCCAGTCAACTTCGGGGTCCAGCAGAACAACACCGAGGCGTTCTCTGTGGCTCTGTGCCACCTGGCCGAGCTGCACGCTGAGCAGGGCCTGTACTGTGCAGTTTCCGAGATTCTCCAGCATCTGAAAGAACAGTTCCCTCCTCACTCGCATCATGCCAAGCTCTGGATGCTGTGCGATCTGAAAATCCAGTTTGAGAGACATATGAACGAAGGGAAATACCATTTGGCAGAGCCACTAGTCACGGCGATCTCTGCCTTAAACAAAACAGAAGGTCTCTACAGGAAAGCTCAAGTTCTGAAGGCTCTGAACCGGAGCACTGAGGCGTACAGCATCTTACAGCGGCTGCAGGTGCACTGTGAGAAGACTAAACGTACCGAGGTGGTCATCAGAGTTATGCTTTCCACCGCTGAGCTCCACTGGGAGTCGTCTGGCTTCTCCAcagctcttcctctcctcctgcaGGCCTTGGCTCTGGCTAGACAGCACCACCTTCAGTCCCTGGCCTCAGAGACCATCCTCCACCTGGCCTTCACTCAGCTGATGTTGGGGGTTCCTGAGCACGCTCTGAGTGTTCTGCATGAAGCCATCGAGCCCGTTCTGGCCCACGGATCGCTCATGGACAAGGGCCGAGCCCTGCTGCTGACGGCCCGCTGTCAGATGGCGGTGGCTGGGTTCAGGCCAAATGGGCAAGCGCGAGCAGATTTGCATTTGGTGGTTTTGGCTGTCGACACGCTAAATGAGGCAGCAGCCTATTTCTCCAAGCTGAACTGTAAGGAGCGGCTGCGGGACGTCCACTACCTGCAGGCCCAGCTCCACCGCTCTCTGGGGCAAACCTCGCAGTGCAACAAAAGTGCCATGCTCTTCCGGCTGCTGGACCAGGAGCTGCAGTCACCAGCACCGCCGGTCTCCATGCGACTGTAACTACTCCCCTGTCCCACAACTCAACACGAAGGACACAACACCTCCTCTAACCACTAGATGGTGATGAAGATCTGTCCTGCTCCGTCAGCACTAAAGCATTTCGTTTAACATTCAGAGCAACTGTGGAACTCTTTGCACGCAATGCCTGGGTAATAATCATTAGACAGGACAATGTCAGTAGTCATAAACAAGGCTGAGTTACCAGTAGACCAAGAATAGATCAGTTGTCTCTTCACTCATGGTCAGGTAGATTTGATTGATGGCCTGATGATaaacataatgtttttttaattttttttataaatacttCAGCAACAGTCCAGGTCTGTCAGACAGACATAACATGCCTTGCGACGGCGTAGTAGAAACATGGAAGGTTTATCAGGAGCTGTCTCCGCCGTGCTGATTTAACCACCTCCTTTTGATGGACGAGGGTAATATCACAGTTAGCTACAAGATGAATGTGTTTCAGTGGCCCCGATGATTCATATTTTGCCAGAAGAATACAGATGAAGTGGGAATCCGGAGGAGAAAATCACTATCATAAGAGACCCACGATGACATAACACCAGATACTGTTGCTGTATTCCGCTAATGTCCGACATGATTTGTGACAAAGATTTTTGGCTGATAATATTACATTTCGGTGTCCTGACGGGCCTGTGATCCATTACCCGCTGCACTTCTTTCAAGAAAATAAACGACTTGCTTTTT

Function

symbol description
anapc5 Predicted to be involved in anaphase-promoting complex-dependent catabolic process; positive regulation of mitotic metaphase/anaphase transition; and protein K11-linked ubiquitination. Predicted to act upstream of or within cell division. Predicted to be part of anaphase-promoting complex. Orthologous to human ANAPC5 (anaphase promoting complex subunit 5).

NR:

description
anaphase-promoting complex subunit 5 isoform X2

GO: NA

KEGG:

id description
K03352 APC5, ANAPC5; anaphase-promoting complex subunit 5

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039803790.1 True 3406 mRNA 0.50 17 2560749 2577050

Neighbor

gene id symbol gene type direction distance location
LOC120560453 NA coding upstream 21616 2537954 ~ 2539133 (+)
LOC120561412 lrrtm4,LOC104959581,LOC103353625,LOC101488074,LOC100703069,LOC102799547 coding upstream 125807 2365750 ~ 2434942 (+)
LOC120560154 nefl,LOC102797482,LOC104959585 coding upstream 294006 2262909 ~ 2266743 (+)
klhl22 klhl22 coding upstream 357683 2192912 ~ 2203066 (+)
LOC120560792 gnrh1 coding upstream 400122 2157612 ~ 2160627 (+)
lrrc75ba lrrc75b,LOC104956515,LOC102775864 coding downstream 23840 2600890 ~ 2616973 (+)
asphd2 asphd2 coding downstream 53454 2630504 ~ 2634683 (+)
cabp1a cabp1,LOC100709699,LOC102206763,LOC102781601,LOC104946293 coding downstream 63102 2640152 ~ 2654597 (+)
mlec mlec coding downstream 79461 2656511 ~ 2662450 (+)
LOC120561358 LOC104949113 coding downstream 307711 2884761 ~ 2889848 (+)
G58603 NA non-coding upstream 30026 2530492 ~ 2530723 (+)
G58601 NA non-coding upstream 34479 2526052 ~ 2526270 (+)
G58599 NA non-coding upstream 36182 2524207 ~ 2524567 (+)
G58598 NA non-coding upstream 36815 2523641 ~ 2523934 (+)
G58597 NA non-coding upstream 37111 2523439 ~ 2523638 (+)
G58618 ggt5,LOC104956559 non-coding downstream 47067 2624117 ~ 2625352 (+)
G58650 NA non-coding downstream 86353 2663403 ~ 2665691 (+)
G58651 NA non-coding downstream 88768 2665818 ~ 2667041 (+)
G58652 NA non-coding downstream 90208 2667258 ~ 2667835 (+)
G58653 NA non-coding downstream 91036 2668086 ~ 2668677 (+)
dock5 dock5 other upstream 248084 2273678 ~ 2312665 (+)
lmx1bb lmx1b,LOC102213269,LOC100696266 other upstream 1722888 789405 ~ 837861 (+)
LOC120560799 NA other upstream 2348366 210742 ~ 212383 (+)
lman2lb NA other downstream 301324 2878374 ~ 2883861 (+)
LOC120560521 tjp2 other downstream 858115 3435165 ~ 3522756 (+)
G59086 NA other downstream 1540229 4117279 ~ 4117631 (+)
G59172 sub1 other downstream 1847091 4424141 ~ 4429981 (+)
trnal-aag_1 NA other downstream 1855121 4432171 ~ 4432253 (+)

Expression


Co-expression Network