ggt1a (ggt1,LOC102775580,LOC108234964)


Basic Information

Item Value
gene id ggt1a
gene name ggt1,LOC102775580,LOC108234964
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 2577875 ~ 2592746 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039803791.1
GTTTGGAGCAGAGGACACTTGTTTCTGAGCTGAAGGATTGTGTCTGACTCTGAGGTGTCGATTTTCCCCGGGCAGGAAAATGGTTGGGAAGTCCCTGATTGCTGGTCTGGTGGTCCTTCTGGTGGCTGCAGTGAGCCTGTTCCTGGGGGTGTTCATGGGCTTGGGGAAGAAAAACACACCTCCCCCCATGGACCACTTCTACTCAAAGGCTGCTGTGGCTGCCGATGCTGGAAAGTGTTCAGAAGTGGGGAGgGACATTTTGAAGAAAAACGGTTCTGCCGTGGATGCTTCTATCGCTGCCTTGCTATGTGTCGGCCTTTTGAACGCTCACAGCATGGGCATCGGGGGAGGGCTCTTCTTTGTCATCTATGACGCTTCCACAGGGAAGGTGGAAACCATCGATGCGAGGGAGACGGCGCCGATGAACGCCACTGAAGATATGTTTGGCAACAATACCAAGCTTTCTCGTACAGGTGGATTGTCCATAGCCATTCCCGGGGAGATCCGCGGTTACGAGATGGCCCACAAGAGGCATGGCAGGCTGCCATGGAAAGACCTGTTTGAGCCCAGCATCGCCTTGGCTCGAGATGGATTTCCTATAGGAAAAGCTTTGGCTCATGCCATCTTCAAGAGCAAAGATTCCATTCAAAGAGACGCCAACATGTGTGAGGTGTTTTGTGATTctcaaaaaaaaatactgaaggAAAACGATATTGTTAAATTTCCAAAGCTGGCCGACACGTACCAAAGGATAGCAGAAGAGGGGCCAGATGTGTTTTATAACGGGTCGATGGCACGGAGCATCGTCAAGGACATCCAGGCTGCAGGCGGCATTATCACCCTGGATGATTTGTTGGAGTACCAACCTGTGCTGAATGAGAACCCTTTGAAGCTGAACCTTGGTGAATACACCATGCATGTCCCAGACGCCCCCTCCAGTGGCCCTGTGCTGGCACTCATACTCAACATAGTGGATGGCTACAACTTCACAGACACAAGTGTGTCTACGGCAGAGAAAAAGACTCTAACGTACCATCGGATCCTAGAGGCTTTTCGTTTTGCCTATGCCAAGAGGAGCAGACTCGGGGACCCACGTTATCTCAACATTACTGATCTCCTCCTAAACATGACCTCAGACTACTTTGCTGATGGCATCAGGAGTAAAATTACAGACGacaccacccacccagacagCTACTACGAGCCAGACTACTTTGTCCCAGACAACCACGGGACCGCTCACCTGTCGGTCATAGCTGAGGACGGAAGCGCTGTGGCGGCCACCAGCACCATCAATCTATACTTTGGTTCAAAAGTCATGTCTCGATCGACTGGAATCATTTTCAACGATGAAATGGACGACTTCAGCTCTCCGTACATGACCAACGGCTTTGGAATCCCTCCTTCACCCAACAATTTCATTCAACCAGGCAAGAGGCCGCTGTCTTCCATGTGTCCTACCATCATCTTtgacaaagacaacaaagtgAAAATGGTTGTAGGAGCGTCCGGGGGCACAAAAATCACCACAGCCACTGCCTTAGTCATCCTAAACTCCTTGTTCTTCAACTATGACCTAAAGAAAGCTGTGACCGAGCCACGGGTTCACAATCAGCTCAACCCAAATATGACAGTAGTGGAGCAGGGCTTTGAAAAGAGTGTTGTGGACGGTCTGGTCCAGAAGAACCACGTAACACAGCTGCTGCCGACTCCAGACTCCGTGGTCCAAGCGGTGGTGCGGCAGGGAGAGCGTCTCTGTGCCGAGTCCGACCCCAGGAAAGGAGGCTATCCAGCCGGGTACTGACCGGGACTTCAGGGCCTTCTGTACTCCTCTCAGTCTGGACAGTCTCCTCAAAGACACTCGGGAAGAGCCACAATACAAAGGTGCCTGCACTGAAGACTCAAAGCAGTGTTTAAGCTATGGAGACACAGCCACCCGTTAACGTTCACTCAAACATGGAAAAGGACTCCATTCCAAAACCTCTTTTACTCAAACTCAATTATtcagcatttcatttcattctttttttctaaccctaatccttaTATTTTTGAGTTTTGAAGTAAAATAAGAGGTTGCACCTAGTTTGATTTCTGTATCATCACTACTGGGCATGTTTTGGGGAGGCCCAAAACACCATCTGCTTTATATAATAAACCTGTTATGTATGACAGTATCCAACATATTAAAAACAACCAAGTAAGTACCAAGAATTAGTGAAAGGATAAAGTTTCATCACTATGTATCTTTTAGGTAAGAATCTGAGTTGGCTGTAGGTTGTCCATgtactattttcatttattttattgtctaAGGAAAAGCTATTGTGAATAATTGGACAATTTGTCTGAgcatggggggagggggagggttGTTACCATGTCAAACTGGTGAAAAACCATCAATTTAAAAACTAGACCTATACCAATTAAAAATAAGGACACCTCAGGTTGTTCGCCTGTTTTATACCGAAATCTTTCTCCTGGTGTAAGTTGATCCTGAAGCGAACATTATTAAGAGGAAACTGACGGTGTTGTTTTCTACCGTGACTCTATAGTGAAAATTATTACTTTAgaattgtaaatgtttaatATCGAGTAGCGGTTAGGTGAATGTATAGTGTATTttgaaaaatacatttgcaGATATATTTTTCTAAACATGCATTGTTCTTATGCCATGTTTGTTAttaaacattttgaacaaagatgTTATATTTTACCACACGGACCCTCTGGGTATTTCTGTGCTGTTTCTGTAACTAGAATATTAGGCATGAAATAAGAATACACTTTCTTTTAGTA
>XR_005639531.1
GTTTGGAGCAGAGGACACTTGTTTCTGAGCTGAAGGATTGTGTCTGACTCTGAGGTGTCGATTTTCCCCGGGCAGGAAAATGGTTGGGAAGTCCCTGATTGCTGGTCTGGTGGTCCTTCTGGTGGCTGCAGTGAGCCTGTTCCTGGGGGTGTTCATGGGCTTGGGGAAGAAAAACACACCTCCCCCCATGGACCACTTCTACTCAAAGGCTGCTGTGGCTGCCGATGCTGGAAAGTGTTCAGAAGTGGGGAGgGACATTTTGAAGAAAAACGGTTCTGCCGTGGATGCTTCTATCGCTGCCTTGCTATGTGTCGGCCTTTTGAACGCTCACAGCATGGGCATCGGGGGAGGGCTCTTCTTTGTCATCTATGACGCTTCCACAGGGAAGGTGGAAACCATCGATGCGAGGGAGACGGCGCCGATGAACGCCACTGAAGATATGTTTGGCAACAATACCAAGCTTTCTCGTACAGGTGGATTGTCCATAGCCATTCCCGGGGAGATCCGCGGTTACGAGATGGCCCACAAGAGGCATGGCAGGCTGCCATGGAAAGACCTGTTTGAGCCCAGCATCGCCTTGGCTCGAGATGGATTTCCTATAGGAAAAGCTTTGGCTCATGCCATCTTCAAGAGCAAAGATTCCATTCAAAGAGACGCCAACATGTGTGAGGTGTTTTGTGATTctcaaaaaaaaatactgaaggAAAACGATATTGTTAAATTTCCAAAGCTGGCCGACACGTACCAAAGGATAGCAGAAGAGGGGCCAGATGTGTTTTATAACGGGTCGATGGCACGGAGCATCGTCAAGGACATCCAGGCTGCAGGCGGCATTATCACCCTGGATGATTTGTTGGAGTACCAACCTGTGCTGAATGAGAACCCTTTGAAGCTGAACCTTGGTGAATACACCATGCATGTCCCAGACGCCCCCTCCAGTGGCCCTGTGCTGGCACTCATACTCAACATAGTGGATGGCTACAACTTCACAGACACAAGTGTGTCTACGGCAGAGAAAAAGACTCTAACGTACCATCGGATCCTAGAGGCTTTTCGTTTTGCCTATGCCAAGAGGAGCAGACTCGGGGACCCACGTTATCTCAACATTACTGATCTCCTCCTAAACATGACCTCAGACTACTTTGCTGATGGCATCAGGAGTAAAATTACAGACGacaccacccacccagacagCTACTACGAGCCAGACTACTTTGTCCCAGACAACCACGGGACCGCTCACCTGTCGGTCATAGCTGAGGACGGAAGCGCTGTGGCGGCCACCAGCACCATCAATCTATACTTTGGTTCAAAAGTCATGTCTCGATCGACTGGAATCATTTTCAACGATGAAATGGACGACTTCAGCTCTCCGTACATGACCAACGGCTTTGGAATCCCTCCTTCACCCAACAATTTCATTCAACCAGGCAAGAGGCCGCTGTCTTCCATGTGTCCTACCATCATCTTtgacaaagacaacaaagtgAAAATGGTTGTAGGAGCGTCCGGGGGCACAAAAATCACCACAGCCACTGCCTTAGTCATCCTAAACTCCTTGTTCTTCAACTATGACCTAAAGAAAGCTGTGACCGAGCCACGGGTTCACAATCAGCTCAACCCAAATATGACAGTAGTGGAGCAGGGCTTTGAAAAGAGTGTTGTGGACGGTCTGGTCCAGAAGAACCACGTAACACAGCTGCTGCCGACTCCAGACTCCGTGGTCCAAGCGGTGGTGCGGCAGGGAGAGCGTCTCTGTGCCGAGTCCGACCCCAGGAAAGGAGGCTATCCAGCCGGGTACTGACCGGGACTTCAGGGCCTTCTGTACTCCTCTCAGTCTGGACAGTCTCCTCAAAGACACTCGGGAAGAGCCACAATACAAAGgacggAGGTTCAACTACGGTCAAAGGGAGGTAAACAAAACGTGTGCAGGACTCAGGACCCCTGAAGAGACTgaccctgttttattttcactcTCCAGTGACTTTCAATCAGTACTCAGTAAATATGTCCACTCATGTGTgctctttgagaaaatgaaaagtcAAGTACCAGCTGCAATCTcaaaaatgtcagatttttgtCATTCATAACTTTTCtgagcttaaaaaaatatatatatttttagccacttttttttcttcatttgttcAGATTTGAAAGACATGTACGATCTCACAGGTCATAGAACTTTCTCAACTCATGTAAATTGCTCTGTTGCATTAAAAGCACTTTGTGTAACCAGTAGAGCGTCAAATTCAAATAGAAAGCTCTCTGCTGTAAATGATTCTGTGCAACTTGATGGATAACAATTAATGGTTTGAAGCCCACAGCAGCAAATTATACAGGCAACATAAAGTAAAAGCATAAACTCCGCCCTGTACACAGGGTTCATACACAtcttaaccaatacttttccatgactttttggcaaatttccatgactatgtgttcctgtTCCATACTATGTgttcagtcgacatt

Function

symbol description
ggt1 Enables glutathione hydrolase activity; leukotriene-C(4) hydrolase; and peptidyltransferase activity. Involved in carboxylic acid metabolic process; glutathione catabolic process; and zymogen activation. Located in plasma membrane. Implicated in gamma-glutamyl transpeptidase deficiency. Biomarker of several diseases, including biliary atresia; diabetes mellitus (multiple); diabetic neuropathy; fatty liver disease (multiple); and liver disease (multiple).

NR:

description
PREDICTED: gamma-glutamyltranspeptidase 1

GO:

id name namespace
GO:0006749 glutathione metabolic process biological_process
GO:0003840 obsolete gamma-glutamyltransferase activity molecular_function

KEGG:

id description
K18592 GGT1_5, CD224; gamma-glutamyltranspeptidase / glutathione hydrolase / leukotriene-C4 hydrolase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039803791.1 True 2805 mRNA 0.46 12 2578954 2592746
XR_005639531.1 False 2484 transcript 0.48 13 2577875 2592746

Neighbor

gene id symbol gene type direction distance location
LOC120560454 NA coding downstream 25181 2551428 ~ 2552694 (-)
LOC120560452 LOC104959125 coding downstream 40316 2537218 ~ 2537559 (-)
LOC120560021 NA coding downstream 69061 2504472 ~ 2508814 (-)
lrrtm4l2 LOC104959582,LOC103353626 coding downstream 221605 2353073 ~ 2356270 (-)
vsig8b NA coding downstream 247052 2324986 ~ 2330823 (-)
ggt5a ggt5 coding upstream 26469 2619215 ~ 2627761 (-)
si:ch211-170d8.2 NA coding upstream 74516 2667262 ~ 2671095 (-)
hps4 hps4,LOC102793116 coding upstream 77488 2670234 ~ 2683703 (-)
LOC120561357 NA coding upstream 260562 2853308 ~ 2855703 (-)
zgc:162952 LOC103356462,LOC104930869,LOC101468259,LOC102311328,LOC100693656 coding upstream 422863 3015609 ~ 3042256 (-)
G58625 NA non-coding downstream 21012 2556645 ~ 2556863 (-)
G58596 NA non-coding downstream 59674 2517955 ~ 2518201 (-)
LOC120561196 NA non-coding downstream 86081 2491267 ~ 2491794 (-)
G58588 NA non-coding downstream 98267 2476272 ~ 2479608 (-)
G58560 NA non-coding downstream 242853 2334746 ~ 2335022 (-)
G58678 NA non-coding upstream 123155 2715901 ~ 2716316 (-)
G58716 NA non-coding upstream 208996 2801742 ~ 2801971 (-)
G58725 NA non-coding upstream 220625 2813371 ~ 2813695 (-)
G58748 NA non-coding upstream 280609 2873355 ~ 2873629 (-)
G58806 NA non-coding upstream 406453 2999199 ~ 2999415 (-)
LOC120560995 NA other downstream 26509 2550046 ~ 2551366 (-)
ankrd39 LOC103353637,LOC100700369 other downstream 438232 2137796 ~ 2139643 (-)
rimbp2 rimbp2,LOC107081823,LOC108247306,LOC103353655 other downstream 919827 1532053 ~ 1658048 (-)
LOC120560045 NA other downstream 2552926 17589 ~ 24949 (-)
si:ch211-107p11.3 LOC103353652,LOC102075650,LOC108234931,LOC104950460 other upstream 93145 2685891 ~ 2689087 (-)
LOC120561394 LOC107097799,LOC103353613,LOC101077666 other upstream 97864 2690610 ~ 2692543 (-)
LOC120561349 donson,LOC102310661 other upstream 241442 2834188 ~ 2846607 (-)
tnc tnc,LOC104930867,LOC103356464 other upstream 456923 3049669 ~ 3134549 (-)
si:ch211-102c2.4 NA other upstream 639860 3232606 ~ 3240063 (-)

Expression


Co-expression Network