LOC120560903 (LOC103397900,LOC107386316,LOC108233556,LOC101070320,LOC106510880,LOC100705620,LOC101474073)


Basic Information

Item Value
gene id LOC120560903
gene name LOC103397900,LOC107386316,LOC108233556,LOC101070320,LOC106510880,LOC100705620,LOC101474073
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 29258918 ~ 29260327 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039803794.1
GTCTGTGGGTCAGGTATAAAAGCAAAGGGTTAAACCAGGTAGGGTACAGTTCAGTgcaagagcagcagcagtaccagcagcagcagcccactGACCATCAAAATGACTTCCACTGGAATGAACATGATGAGCAAGatcaTCTTCTACGAGGAGAGGAACTTCCAGGGTCGTTCCTATGAGTGCATGAGCGACTGCCCCGACATGTCCTCCTACATGAGCAGGTGCCACTCCTGCAGGGTGGAGAGAGGCTGCTTCATGGTGTACGACCGCCCCAACTACATGGGAAACCAGTACTTCATGAGGAGGGGCGAGTACAGCGACTACATGAGCATGCTGGGCATGAGTGACACCATCAAGTCCTGTCGCATGATCCCCATGCACAGGGGATCCTACAGGATGAGGATCTACGAGAGGGAGAACTTCGGCGGTCAGATGTATGAGCTGATGGATGACTGTGATGACATCATGGGTCGTTACCGCATGTCCAACTGCATGTCCTGCAACGTGATGGAGGGCCACTGGCTGATGTACGAGCAGCCCCAGTACAGAGGCAGGATGATGTATGTGAGGCCCGGCGAGTACAGGAACTTCATGCACATGGGCAGTAGCAGCATGAGGTTCATGAGCATGAGGCGCATCACCGACTCCTGCTATTAGACTCTCTTAGCACTGAATAAAACTGTCATAACCTAAA

Function

NR:

description
PREDICTED: gamma-crystallin M3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039803794.1 True 694 mRNA 0.53 3 29258918 29260327

Neighbor

gene id symbol gene type direction distance location
pmpca pmpca coding upstream 10017 29242722 ~ 29248901 (+)
LOC120561007 NA coding upstream 35238 29220854 ~ 29223680 (+)
ptgs1 LOC103362336 coding upstream 44123 29203493 ~ 29214795 (+)
zgc:152968 NA coding upstream 186751 29060747 ~ 29072167 (+)
LOC120560378 st8sia3,LOC104919001,LOC100693561,LOC102785111,LOC102199258,LOC101477372 coding upstream 208694 29041940 ~ 29050224 (+)
LOC120560594 LOC103353434 coding downstream 36795 29297122 ~ 29343400 (+)
camsap1b camsap1 coding downstream 93793 29354120 ~ 29382295 (+)
LOC120560482 NA coding downstream 122049 29382376 ~ 29390784 (+)
LOC120561062 LOC104962503,LOC102314469 coding downstream 232925 29493252 ~ 29495142 (+)
LOC120560080 LOC104962503,LOC102314469,LOC102076298,LOC103353443 coding downstream 236453 29496780 ~ 29503951 (+)
LOC120560778 NA non-coding upstream 127702 29072941 ~ 29131216 (+)
G65570 NA non-coding upstream 153309 29103988 ~ 29105609 (+)
G65565 LOC108233773,LOC103375797 non-coding upstream 160605 29078426 ~ 29098313 (+)
G65473 NA non-coding upstream 256738 28985613 ~ 29002180 (+)
G65418 NA non-coding upstream 442518 28816185 ~ 28816400 (+)
G65710 NA non-coding downstream 287122 29547449 ~ 29614880 (+)
G65713 NA non-coding downstream 328680 29589007 ~ 29591364 (+)
G65734 NA non-coding downstream 511312 29771639 ~ 29771864 (+)
G65738 NA non-coding downstream 551645 29811972 ~ 29812218 (+)
G65745 NA non-coding downstream 675566 29935893 ~ 29936995 (+)
mboat4 NA other upstream 409447 28845626 ~ 28849471 (+)
G65084 lipg other upstream 1887959 27205234 ~ 27370959 (+)
ndufs4 ndufs4 other upstream 2219319 27012210 ~ 27039599 (+)
si:dkey-178e17.1 slc25a1,LOC100697273,LOC101470788,LOC103359526,LOC102784907,LOC107394264,LOC103145904 other upstream 2597023 26644661 ~ 26661895 (+)
cltcl1 LOC100691387,LOC103359525 other upstream 2614751 26614237 ~ 26644167 (+)
ubac1 ubac1 other downstream 84253 29344580 ~ 29351756 (+)
fbxo21 fbxo21 other downstream 926521 30186848 ~ 30212108 (+)
LOC120560820 NA other downstream 986560 30246887 ~ 30251519 (+)
G65899 taok3 other downstream 1313759 30574086 ~ 30578159 (+)
LOC120561064 NA other downstream 1597253 30857580 ~ 30893280 (+)

Expression


Co-expression Network