LOC120560914


Basic Information

Item Value
gene id LOC120560914
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 35380725 ~ 35394499 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039803804.1
TCATATCTTAATCACATCACACATGAAAATAACAtgttctctgtctttagttCTTTAGAGGAATAATAACAGGTGCAGAAAAGGGATGGACGCTTTTGGATGTTTAAAACGAGCTGGTCTTTTGAGTATATTGCCATTTTCACCATTACAGTAAGATGGACATTTGGTCTCCTAAACTGCACCTTGCTACGTGGACTGTGATGAGcttcctctgtgtgttttctcatGaggTGACGGTGAGGGACTCTGACCTGAAGCTGTGTGAGAAGGACGAGCGATTGTGTGTCACTGACCTCAGAGACTGTGCCCCTCGACCTCCTGCATCTATACAGAAGACGCTGAACATGTCCTGTTGCTACCAGATATCACACAGATCCATGACATGTGAGTGGAGTCAGGAGTCAAACAGCTTCACTGAGTCTGACGTCTCTCTCATCTTCAGCAGCGGAGATACAATCATATCCTGTCAGGGAATCTTCAACCCTGCAGCTGTCCTCAACATAACAGCTAGGATCAAAAACTACATGATGGGGAGGGAGATCTGGTCCCAGCCTCATACTGTATTTCTTTATGATGCAGTCAAACCCTCTCAGCCTGTATTAACTGTCCTTGGCTCCACTGAGGACTCTATTGTTGTGTCTTGGAGAAGCAACGTTGGTGACGGCAGTTGTCGGCTTCGCTACAGAGACAACAACACTCACACATGGACCCAGGCTCCAGATTACGTCCCTGCACATCAAGATCAGACACTGACCTACACGATCACAGACCTCCTGACGTTTACCGTCTACAGAGCTGCTGTGGCCTGCAGAGAGGACTTCGGCATCTGGAGCGACTGGAGTTCTGACGTCAGCACGAGGACGCTGGATAgggTGCCCTCCAGGCCTCCAGAGGTGTGTTACAGAGTGGAGACAACAGACTCTGGTGGATCTTTTCTCCTTCATCTCATGTGGAAGgaccTTGACCTCCGTGATGCCAGAGGTCGTATCCTTGgataccaggtgagctacaagCCAGTGAAGAAGCAGCAGCTCCAGGACAGAATAATTCAAAATGTCACAGATGTGACGGCGCTCCTGGTGGtggaagaggggaactgcagtgTCACAGTTACTGCCTTCAATACGGCCGGCTGTGGACCTGCTGCACATCTCCGcattgacacacaaacacagaacaCTCTCTCGTCAGTCAGAAGCTTATGGGTGTCCAGTTCTTTCCCGGCTATGAAGGGCCTACTGGTCCAATGGGAGAGCCCCACAGCCTCGCCCTCTGTCCCGCCTGTCAGTCATTTTGCTGTTCAGTGGCGCTCCGAGACTCGTCCATCCACCAGCCGCTGGACCACAGTGGGCTACAACACCACCTCCACTGTCATACGAGATGTTGACCCTGATGAGTCCTACCTGatcagtgtgttccccatctaCCCCCATCAGCAGTGTGGATCTCCTCAGTTGCTGCCTGCCAGTCTGCAGCAAGGAGCACTGATGGAGCCGGTCCAACTGAAGGTGGGGGTCGTGACCAAAACCACAGTGACAGTGGTGTGGGTGTGGCAAAGGAAGGCTGGACCAATCAGAGTGAACAGATACAGAGTCATGCTGACAAAAGAATTGGAGAGCAAAACACTGTCTTTGTGGCCGGACCAATGGCAGCTCACCTTCAACAACCTGAAACCCAACACTGAGTATTCTCTTCTCCTATTGGCTGATGATGTTTCCAGAAACATCATCCCTGTGAGGACAGACTTTGATGAGATGCCAGCGGTGGCTACAGCgactcctctgctgctgctggctgtcaCTGTGCTCATCATCTCCATCCTGTCCAGGACTGTGTACAAGTCGTACTTCTTCCCGCCCATCTCCAGCCCCCGGGCCAGTACGACAGGCCAGTGGCTGATGGACCCAAACCACCAGAAAACTGCAGTGATAAACCTCCTGGATATTGAGGACTTCCAGGTGACAGACGTACTCGGAGAGAAGAGTCTCATCACGGTCTGTCCGAATGTCCAGCCCTCCTCAGAAGAGGACCTACATGAAGACACCTCTCTGCTGTTGATCAGCCGCCTCATCATCAAACCGTCAGCCCTAGAACTGGACCCAGAGTATATTTCTGATGCTCCAGTGATCACAGAGCACCCACTGGTTTCTCTCCAGTCCTACCATGCTGACTACACAGTGAGCTGCCGACATCCTGACACAGTTTTCCCATCTGAGGAGAGCAGTGAGGCCGACGCTGCTATGCTGCATCAGACACGTGAAGCCAACAGCTGCTTTCctcagaaagaggaagagagtgacTTTTCTGAGAGGTTACATCAGAAGGAGAAGGAAACTGCACTGAAATGTCATTTTCCTGAATTCATGGAAAACAGTCACTGTGCTTATCAGATAACCTGTGAAGCAGAGtatgtttcttcttttctggGGAAAACAGATGTGTAAACAGTGAGTGGACACTGGTTTTATCTGATCTGTGAGACTGATTATGGACAGAGTACTTCAGTGCAACATGCCGGGTTAAACACAGGTGGAAAAGTGAGAGTAAATGGTTACAGACATGCTGGTGATTCCTGGCTGTAATCTCTATTACACAGCAGACAACCTACTGTATTCTTAACCACTGGAGGGGCAAAGCACATTGCTTTGGCTGGTGGGTGGCACCTGAATTAAAAGAGTGTATTCTCTTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039803804.1 True 2689 mRNA 0.50 15 35380725 35394499

Neighbor

gene id symbol gene type direction distance location
LOC120561082 NA coding upstream 171010 35200417 ~ 35209715 (+)
LOC120560891 LOC104934778,LOC100695474,LOC103374565,LOC101464334,LOC102198690 coding upstream 198729 35161583 ~ 35181996 (+)
slc2a8 slc2a8,slc2a6 coding upstream 220071 35145750 ~ 35160654 (+)
mymk tmem8c,LOC107720238 coding upstream 248978 35125559 ~ 35131747 (+)
LOC120561072 NA coding upstream 428248 34951502 ~ 34952477 (+)
znf608 znf608,LOC102795784 coding downstream 68792 35463291 ~ 35522112 (+)
LOC120560628 NA coding downstream 202307 35596806 ~ 35603337 (+)
LOC120560627 NA coding downstream 212969 35607468 ~ 35611982 (+)
LOC120560626 NA coding downstream 219351 35613850 ~ 35619866 (+)
LOC120561433 ppic coding downstream 280872 35675371 ~ 35683544 (+)
LOC120561203 NA non-coding upstream 122653 35255661 ~ 35258072 (+)
G66907 NA non-coding upstream 378529 35000278 ~ 35002196 (+)
G66834 NA non-coding upstream 551071 34828892 ~ 34829654 (+)
G66830 NA non-coding upstream 564398 34815589 ~ 34816327 (+)
G66769 NA non-coding upstream 871112 34508142 ~ 34509613 (+)
LOC120560688 NA non-coding downstream 500652 35895151 ~ 35898183 (+)
G67202 NA non-coding downstream 661185 36055684 ~ 36059486 (+)
G67216 NA non-coding downstream 700316 36094815 ~ 36096123 (+)
G67219 NA non-coding downstream 726396 36120895 ~ 36128995 (+)
G67263 NA non-coding downstream 863207 36257706 ~ 36257913 (+)
LOC120561428 fam163b,LOC103374717,LOC102797860,LOC101061299,LOC102298266,LOC101485828,LOC104964271,LOC102215914 other upstream 321094 35046844 ~ 35059631 (+)
G66832 NA other upstream 516035 34861499 ~ 34864690 (+)
LOC120561070 NA other upstream 606919 34765930 ~ 34773806 (+)
cfap157 NA other upstream 853320 34514010 ~ 34527405 (+)
G66578 NA other upstream 1604327 33775925 ~ 33776398 (+)
LOC120560625 cep120 other downstream 128166 35522665 ~ 35549231 (+)
G67146 NA other downstream 446375 35840874 ~ 35852056 (+)
G67145 NA other downstream 447035 35841534 ~ 35854161 (+)
G67152 NA other downstream 476924 35871423 ~ 36023264 (+)
trpm3 trpm3,LOC103470491,LOC103145554,LOC106928040,LOC101476865,LOC100708457 other downstream 847080 36241579 ~ 36492695 (+)

Expression


Co-expression Network