cfap77


Basic Information

Item Value
gene id cfap77
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 14548679 ~ 14555480 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039803808.1
CTCCATACATCCATGGCATCGATGTAGCTcactcgtggatgtattaagagaaaatcTCACTCTGTTAAACTTTCATCTGAAACTTCCTGTTgaacagttgttgttgttttctggtGCAGTTTTACGTCAAAGTTTAGCGTCATGTTTCCATAGCAACGGAGCAGCTCGACACCCGAGGACACGGATAGAAGACCGTCTTCACAGGAAACATGTCTTCACCCAGGGTGGGTGTGGTCAGAGACTCCATGTTGACCAGACCACTGCTCATCAAGGCATCTTTGGGTCAGACCAGGTCCAGAGGTCTGTCAGTTCCTGGTCCAGAGTTCACTTTTGGAACCAGCAACTTGATCAGAGATGGAGGCGTGTCCGAGGTTCTGTCCAGTTGGAGGGTTCAGTCCAGACGTGGACACTCTGCTCCTCATCAACCGCTCATTACCGACTTTGTGTCTCTGAACCGGGACGCAGTGAAGTCAGGTCTGGTGACAGCCAAAGAGCTGAGTCAGTACCGGGCTCAGAGGGGCGAGGCCAGGAGCAAGATTCCCGCCCCCAAACAGAAGGAGGGCAGGGCTTCACGGCACCCGACGGTGCCTGACATCACGTTTGGAGTCACAACCAGGGTGTCGTCTCCTTTGTCAGACCTCCTCTCTCATGAGTATGCTCGCCGCTGGATGGACGAACAGCTGAGCAGGAATCAAACCAGCGACCACAAACAGCTGCAGAGGATAAAACCAGGATGTATTCCCGACACAAGGACCAGCCTGCTGAGGAGGAGCAAAGCTCTGCCCGTCACACAGACGCCATTCAAGCTGCCCCGCTTTATACAGGCTGCTCCGGCTCTGGACACCTTCAGGGACCAGGACGCTCGTCTCCGGGCGGTCAGGGCTCATCAGTCAGACTCTGTGTCCAGGAGAGGAGTTCAGGGTCTGGGGATGTACAGTCTGGACTGAACTGTGGAGGAAACATGTTCAACcttaattcaaataaaaaagaaaaa
>XM_039803809.1
TCTCCATACATCCATGGCATCGATGTAGCTcactcgtggatgtattaagagaaaatcTCACTCTGTTAAACTTTCATCTGAAACTTCCTGTTgaacagttgttgttgttttctggtGCAGTTTTACGTCAAAGTTTAGCGTCATGTTTCCATAGCAACGGAGCAGCTCGACACCCGAGGACACGGATAGGAATCCatgtcaacaacaaaaaaataaagacctGTGATGCAGCTGGAAGCCAATAAGTGGACCTGCAGTTTGGATTGTTTCGTCAAAGTATTTTAAGAAGACCGTCTTCACAGGAAACATGTCTTCACCCAGGGTGGGTGTGGTCAGAGACTCCATGTTGACCAGACCACTGCTCATCAAGGCATCTTTGGGTCAGACCAGGTCCAGAGGTCTGTCAGTTCCTGGTCCAGAGTTCACTTTTGGAACCAGCAACTTGATCAGAGATGGAGGCGTGTCCGAGGTTCTGTCCAGTTGGAGGGTTCAGTCCAGACGTGGACACTCTGCTCCTCATCAACCGCTCATTACCGACTTTGTGTCTCTGAACCGGGACGCAGTGAAGTCAGGTCTGGTGACAGCCAAAGAGCTGAGTCAGTACCGGGCTCAGAGGGGCGAGGCCAGGAGCAAGATTCCCGCCCCCAAACAGAAGGAGGGCAGGGCTTCACGGCACCCGACGGTGCCTGACATCACGTTTGGAGTCACAACCAGGGTGTCGTCTCCTTTGTCAGACCTCCTCTCTCATGAGTATGCTCGCCGCTGGATGGACGAACAGCTGAGCAGGAATCAAACCAGCGACCACAAACAGCTGCAGAGGATAAAACCAGGATGTATTCCCGACACAAGGACCAGCCTGCTGAGGAGGAGCAAAGCTCTGCCCGTCACACAGACGCCATTCAAGCTGCCCCGCTTTATACAGGCTGCTCCGGCTCTGGACACCTTCAGGGACCAGGACGCTCGTCTCCGGGCGGTCAGGGCTCATCAGTCAGACTCTGTGTCCAGGAGAGGAGTTCAGGGTCTGGGGATGTACAGTCTGGACTGAACTGTGGAGGAAACATGTTCAACcttaattcaaataaaaaagaaaaa

Function

NR:

description
cilia- and flagella-associated protein 77

GO:

id name namespace
GO:0022412 cellular process involved in reproduction in multicellular organism biological_process
GO:0019538 protein metabolic process biological_process
GO:0007281 germ cell development biological_process
GO:0006508 proteolysis biological_process
GO:0003006 developmental process involved in reproduction biological_process

KEGG:

id description
ko04972 Pancreatic secretion
ko04974 Protein digestion and absorption
ko05164 Influenza A

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039803808.1 False 994 mRNA 0.53 7 14548680 14555480
XM_039803809.1 True 1092 mRNA 0.52 8 14548679 14555480

Neighbor

gene id symbol gene type direction distance location
pla2g1b NA coding upstream 94433 14450851 ~ 14454246 (+)
prkab1b LOC103353610,LOC101165238 coding upstream 103527 14437825 ~ 14445152 (+)
msi1b msi1,LOC100704609 coding upstream 119247 14405140 ~ 14429432 (+)
unc119.1 unc119b coding upstream 165452 14377254 ~ 14383227 (+)
idua idua coding upstream 302374 14234278 ~ 14246305 (+)
barhl1a NA coding downstream 909 14556389 ~ 14563699 (+)
LOC120560602 LOC108248102,LOC106527805,LOC101064502,LOC101174676 coding downstream 71141 14626621 ~ 14642212 (+)
LOC120561189 LOC102300215,LOC108165969 coding downstream 91247 14646727 ~ 14666265 (+)
grin1b grin1,LOC101175170,LOC102209996,LOC108248095,LOC107386166,LOC101469542,LOC102312845 coding downstream 122191 14677671 ~ 14753400 (+)
kazald3 kazald1,LOC107097908 coding downstream 212236 14767716 ~ 14772152 (+)
G61468 NA non-coding upstream 49245 14499180 ~ 14499434 (+)
LOC120560938 NA non-coding upstream 49622 14497781 ~ 14499057 (+)
LOC120561032 NA non-coding upstream 76490 14469197 ~ 14472189 (+)
LOC120561034 NA non-coding upstream 82954 14465003 ~ 14465725 (+)
G61450 NA non-coding upstream 144507 14403633 ~ 14404172 (+)
G61513 NA non-coding downstream 120657 14676137 ~ 14677372 (+)
G61539 NA non-coding downstream 470961 15026441 ~ 15027400 (+)
G61540 NA non-coding downstream 472125 15027605 ~ 15027818 (+)
G61730 LOC102301232,LOC102776762,LOC101476977 non-coding downstream 590620 15146100 ~ 15152551 (+)
G61756 NA non-coding downstream 668634 15224114 ~ 15224465 (+)
LOC120560925 NA other upstream 114082 14431330 ~ 14434597 (+)
c6h12orf43 NA other upstream 156096 14389471 ~ 14392583 (+)
G61390 crybb2,LOC108234953,LOC100703162 other upstream 229173 14317539 ~ 14319506 (+)
G61383 NA other upstream 264808 14283417 ~ 14283871 (+)
LOC120560400 tmem150a,LOC106585116 other upstream 266908 14252256 ~ 14281771 (+)
G61514 surf4,LOC103397973,LOC102307728,LOC100699423,LOC101479701,LOC101465012 other downstream 144045 14699525 ~ 14794602 (+)
LOC120561401 NA other downstream 199970 14755450 ~ 14762549 (+)
surf4l surf4,LOC103397973,LOC102307728,LOC100699423,LOC101479701,LOC101465012 other downstream 219033 14774513 ~ 14795943 (+)
cntrl NA other downstream 372893 14928373 ~ 14979797 (+)
G61535 LOC103368073 other downstream 523394 15078874 ~ 15083448 (+)

Expression


Co-expression Network