barhl1a


Basic Information

Item Value
gene id barhl1a
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 14556389 ~ 14563699 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039803810.1
GAGATGGAGGATTCTGCCTCCGGCTGCTCCAGGTTCCGCATCGACTCTCTGCTCTCCCTCAGGCCGGCGGGCGCGCTCCTCTCCCGGGCAGACCCTCCGGAGCTCAGCCCGGGCAGCAGCAGCGGCTGCTCGGCGCCTCCTTCCCCGCGAAGAAAGCCGGTTCCACGGCTGGAGTCTGTGTTGCTGCCCGGTCACCTGCAGCAGTTCCAGCCGCGCACCGTCAGCTCCTCTTTCCTTATCCGGGACATCTTAGGGGACTGCCGGCCCTACTCTGATCCGGATCTGGTCGACTCTGACCCGGGACAGGTCTACCCTGACCCGGGACAGCCGGAGCTAGAAGCCGAGCCATTCCAGTCCGGTCCGGAAGAAGACTATCAGGACAAAAGTCACAGCAGCTTCTCTTCCGACAGTGAATCCAGAGTGCAGAGCGGGGCCTCGGACCCTGTGATGGATCGTCTGAAGAAACCTCGTAAAGCTCGGACGGCGTTCAGCGACCAGCAGCTGTCGAGGCTCGAGAGGAGCTTCCAGAAACAGAAGTACCTGAGTGTCCAGGACCGCATGGAGCTGGCTGCTGCACTGCATCTCAGCGACACCCAGGTCAAGACCTGGTACCAGAACAGGAGAACCAAGTGGAAGCGTCAGTCAGCTGTTGGTTTGGAGCTGCTGGCTGAAGCCGGCAGGATGTTCCTGCCCACGCAGTACCTGTACCCTCCTGCCCCGCCCACACTGGACCTATACCTGTACCGAAGCCACGCCCCCCACcaccgccaccaccaccacccagcCCCGCCCCTGCTGCCTCGCGTGCTGACCCACACGGAACCACACCCGCGCTGACACCAGCACACTGGGAGGACTGGTTCCTACAGAACGACGTACAGGAACAAAAGAACTCATTCATGTTAATGGAGATAGAATTCTTTACTTTAGATTGGGTGTCAAACTCCTTTTAGTTCATGGGCAATATACTCCATCatttgatctcaagtgggccagaccagtAAACCTCTCCAGCATGATCAGAAACTATCtctgccacagagtttcttgtcagcttgagGTTGGCAAAAGCAAGTTGCTTCTAAGGGTTCTAAGCGTTTTAAGGCCCAatgtaggagaaaaaaataatgttacggATCCGGGAGAGAGGGGTAATATTCGGAGAAAAAAACCTCAGAATTTCTAAGATTAAAGTCGTAAATTTACAGAAAAAGAAGTTGGATATTTTCTCagattaaagtggtaaatttggaattggaattaattacttctctgcaattttcacactttgcaaagtcatccgGTGGGCCTGATTGGACCATTGGCGGGCCGGTTCTGGCCCACGGGCCGTACGTTTGACACCCCTGGATTAGGAGAATAAAGTTAAGGAGACTTTTATTAAACCTCGCTCACGGTTCTGCTTTTGTTTCACGGTTCTACACCGGCTGCAGGGATGTGTTCCTGGAACTAAATCTGGACTCAGTCAGGAGGCGATGCTGAATGGAGGTTAAGGTACTTTTAGGAGTCTGGGGCAGTGAGGTTGGTCGTGACTGGTCGAGCAGATGTGACGTCACATCACAACAAGGACGACTCCAACAAACAAAAGTAACCCCTTTTTCATGTGTACGCAGCGCAGCAGGACAACCGGTCCTTTAAAAAGGACCAAGTGGAGGCATTTGTTGGACAAACCAACATGTTGAGGCTTCAGGGGAAGATTTCCAACACAACATTTTGTCCATATAGTTCTATCATTGATAATAACAACACCGTATTCACAAAAAGAGCTGAGAAAGAAACAAACTGCCAACTGAAGATTCTGGGTGTTTTGAATGTCTAGTTgttatatttcagttttttttttttaaatttcaataaATATGCAAGTAATTCTTAA

Function

NR:

description
barH-like 1 homeobox protein

GO:

id name namespace
GO:0003677 DNA binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039803810.1 True 1894 mRNA 0.51 3 14556389 14563699

Neighbor

gene id symbol gene type direction distance location
cfap77 NA coding upstream 909 14548679 ~ 14555480 (+)
pla2g1b NA coding upstream 102143 14450851 ~ 14454246 (+)
prkab1b LOC103353610,LOC101165238 coding upstream 111237 14437825 ~ 14445152 (+)
msi1b msi1,LOC100704609 coding upstream 126957 14405140 ~ 14429432 (+)
unc119.1 unc119b coding upstream 173162 14377254 ~ 14383227 (+)
LOC120560602 LOC108248102,LOC106527805,LOC101064502,LOC101174676 coding downstream 62922 14626621 ~ 14642212 (+)
LOC120561189 LOC102300215,LOC108165969 coding downstream 83028 14646727 ~ 14666265 (+)
grin1b grin1,LOC101175170,LOC102209996,LOC108248095,LOC107386166,LOC101469542,LOC102312845 coding downstream 113972 14677671 ~ 14753400 (+)
kazald3 kazald1,LOC107097908 coding downstream 204017 14767716 ~ 14772152 (+)
LOC120560087 LOC103371518 coding downstream 278372 14842071 ~ 14867655 (+)
G61468 NA non-coding upstream 56955 14499180 ~ 14499434 (+)
LOC120560938 NA non-coding upstream 57332 14497781 ~ 14499057 (+)
LOC120561032 NA non-coding upstream 84200 14469197 ~ 14472189 (+)
LOC120561034 NA non-coding upstream 90664 14465003 ~ 14465725 (+)
G61450 NA non-coding upstream 152217 14403633 ~ 14404172 (+)
G61513 NA non-coding downstream 112438 14676137 ~ 14677372 (+)
G61539 NA non-coding downstream 462742 15026441 ~ 15027400 (+)
G61540 NA non-coding downstream 463906 15027605 ~ 15027818 (+)
G61730 LOC102301232,LOC102776762,LOC101476977 non-coding downstream 582401 15146100 ~ 15152551 (+)
G61756 NA non-coding downstream 660415 15224114 ~ 15224465 (+)
LOC120560925 NA other upstream 121792 14431330 ~ 14434597 (+)
c6h12orf43 NA other upstream 163806 14389471 ~ 14392583 (+)
G61390 crybb2,LOC108234953,LOC100703162 other upstream 236883 14317539 ~ 14319506 (+)
G61383 NA other upstream 272518 14283417 ~ 14283871 (+)
LOC120560400 tmem150a,LOC106585116 other upstream 274618 14252256 ~ 14281771 (+)
G61514 surf4,LOC103397973,LOC102307728,LOC100699423,LOC101479701,LOC101465012 other downstream 135826 14699525 ~ 14794602 (+)
LOC120561401 NA other downstream 191751 14755450 ~ 14762549 (+)
surf4l surf4,LOC103397973,LOC102307728,LOC100699423,LOC101479701,LOC101465012 other downstream 210814 14774513 ~ 14795943 (+)
cntrl NA other downstream 364674 14928373 ~ 14979797 (+)
G61535 LOC103368073 other downstream 515175 15078874 ~ 15083448 (+)

Expression


Co-expression Network