ddx31 (ddx31,LOC102778005)


Basic Information

Item Value
gene id ddx31
gene name ddx31,LOC102778005
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 14566031 ~ 14580163 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039803811.1
TCCACAAAATCAGCTGTGAAGGAGACGGGGCTTCAGTGACGTACCAGGAAGAGATCCCCACGCGTGTAGTTTGGTTGTGTTTTACGGTGTGCTGATGATGTCatcggcagcagcagcagaggaccAGCTGTGTCTGAACATCTGCAGCAGTTTCTCCCCCTCTTCATCCCCCCGGTCAAAACCTCTGACTACTCAGCAGAGATGGGCCAGAAAGAAGCACAACGCCGAGAAGAGAAGGATCAACTcctcagaggaggaggagaagaagagaggctCCTTCAAACAGAGGAGACTGGACAAGAAAGccgaggaagaagaagaagaagaagaggaggaggaggaggtgcagACTGAAGCTTCTCCTCCTGCAGACACTCAGTCTCTATCCactgtgcagacagacaggaagacaccacagaagaagaaggatgCAGTGAGGGAAACAGGAAGGAGCAGCATCAAGACTTCCTCTCTGTTTAAACACAACCCAGAGATCCCAGAGTTCCACAGACCAGTTGTCTCCCAGTTAAAAGAGAAGATTTTCACCAGTGACTCATTTTCAGACATGGACCTGCACCCACAcctgGTGGCGACACTGAATAAAGTCCTGAATGTTTCCACAGTGACCAgtgttcaGAAACGGACTATCCCAGTTCTCCTGTCAGGACGAGACGCTGTCGTTCAATCTCAGACGGGTTCAGGTAAGACTCTGTCCTACGCCGTCCCCGTGGTTCAGAGTCTGCAGGGGCTCCAGCAGAAGGTCAGCAGGTCCGACGGTCCTCTGGCTGTCGTCATCGTCCCAACAAGAGAGCTCGCCCAGCAGACGTTTCAGACCTTCCAGAAGCTTCTAAAGCCGTTTACCTGGATCGTCCCAGGAGTCCTGatgggaggagagaagaggaaatcGGAGAAGGCCAGGCTTCGTAAAGGAATCAACATCCTGGTGTCAACTCCTGGACGTCTTGTGGATCACATCAAAAACACACTGAGCATCGCCTTCAGTGCTGTTCGCTGGCTGATCCTGGACGAGGCAGACCGgACGTTGGACCTGGGTTTTGAGAAGGATCTGACTGTCATATTAAACAGTCTAAACTCTACAGGACCAAGCAGACAGAACGTCCTGCTGTCTGCTACATTAACACATGGTGTAACTCGGTTAGTAGACGTTTGTCTTCAGGACCCAGTTAACATCCACGTGTCTGGCTCCGCCTCCTCTGACCTCACCACCACCAGCTCTgctgtgacctctgaccccagCACAGCCAGCCAATCGGAGAGCTTTGCTTTGCCAGAGGCTTTGAAGCAATATGTGGTAGTGGTTCCCAGTAAGATCAGACTGGTCTGTCTGGCTGCTTTCATACTGGACAAATGCAAGTTTTCTCAGAACAACAAACTTATCGTCTTCTTCTCGAGCTGCGAGGCCGTCGAGTTCCTGCACTCCCTCTTCACCTCCGTCCTCTCTGGGCCCTCCACCGATCAGAAGCCTCAGCTCTGCTTTCTGCGTCTCCATGGCAACATGAAGCAGGAGGAGCGCTCTGAGGTCTTCCAGCAGTTTTCCGTGTCTAATTCTGGAGTCCTGCTGTGTACGGATGTCGCAGCCAGAGGTCTGGACCTTCCACAGGTCACCTGGATCATTCAGTACACTCCTCCCACGGCAGCAGCAGAGTACGTTCATCGTGTCGGTCGGACGGCCCGTATCGGAGGAAGAGGtagcagcctcctcttcctcactccTGCTGAGACCGCCTTCATCACCGAACTGGCCAAACACCACATCAGCCTATCAGAGCTGAAGCTGCTGGACATCCTGTCCAGTCTCATGATGGATGACACCTACAAGGGGCGGGGCAAATACTACAGCAAGagttCGTCTAAAGCCCTGGAGCAGGAGACCAGAGAGAGAGCGACGGTGCTGCAGACAGAATTTGAGAACTTTGTTCACTCAGACGCTCAGTCAGTGCAGAACGCTAAGAAAGCGCTGCAGTCCTTCCTGCGGGCATACACCACCTACCCTGCCCACCTCAAACACATCTTCCACATCCGCTCCCTCCACCTGGGACACACCGCCAAGAGCTTCGGCCTCAGAGACGCTCCGCAGGGCCTGAACGCTGCCCCGGGCCCCGGGGCCAAgacccacaacaacaacaagaaccagaaccagaacaaGGGGACCAGCAGCCAGAAGGCAGGAggaaagagGTTCTCTCGCGGTCAGAGGGAGGTCAGCCTGCTCTGCTCCGAGTTCTCTAGCGGGTTGGAGGGAGCAGACGCCAAGaccaagaagaaaaagaagaagacgacCACATTTGGTCAgtcaggagaggaggaagaggaggaggagtaatGAGGAGGTGCAGCAGCTGGAGGGCCTATGAGCGAAGGTGACGACCTGCAAACAGCTGACTGACTCGCTGTTACAGACACACATCAGACTTTTAGTTGATTAGATAATGAATCTGGATCAGAGTGCAGACGCGGACCTGAAGTCCAGGAGACGTCTGACTGTGTTCAGACAGATCGATGACATTTACATTGCACACAAAGTCAACAGAAAGACATGATTAGTAAATGTCGAAATTTGAGTGAAACATTGACGGTTATGCTGAAGTCTTCATGTAAAAACAGGAGTCTGCGTCTGTTGCATGTTAGCTTCCAGCTAACGTCGGTACAGTGGGTTCAAATCCAGTGAACGATGCTTCACTCTTCCTGTctgaacacacatttaaaatatctgATATAAAGTTTTCTGAATTTGACAGGAAACAATCTCAGAATACAGTTTTTCATACATGACTCTTCTCTGTAAGACATCTTTAAAATGTTGTTGTACTGAAATGAACCCAGGCTCCCCTCTGCCTCAACAGTTGCTTTACCTTTCCATCTTTTTTAAAGGCTAGATTTGGTTTCAAGATGGACTCTGATGGCTTTAACAACCTGGTGTTTCAGCACAAACTGAAGACCAGACGTGTTTTTATTGTTGAAGTCTTCACAGATTCAGGATAATGTGAACAGGACATTTGTGTGTtctttaaatatgaatatttctaCTGTTTGATGACTTTGATgaagatttatttttctttgttggaaaataaaatgtaatttttgctcTTTGAGGGTAGAACCTAC
>XM_039803812.1
TGTATGAAGTCAGCGCTAACGATGTTAAACAGGCTAGGTGTAGCAGACGGCAAACCTTCTGTACGACGGGGCTCCATTCAGAAAGGTGTCCTTACCTGTCAGACAGTGAGACACAGGTGTGCTGATGATGTCatcggcagcagcagcagaggaccAGCTGTGTCTGAACATCTGCAGCAGTTTCTCCCCCTCTTCATCCCCCCGGTCAAAACCTCTGACTACTCAGCAGAGATGGGCCAGAAAGAAGCACAACGCCGAGAAGAGAAGGATCAACTcctcagaggaggaggagaagaagagaggctCCTTCAAACAGAGGAGACTGGACAAGAAAGccgaggaagaagaagaagaagaagaggaggaggaggaggtgcagACTGAAGCTTCTCCTCCTGCAGACACTCAGTCTCTATCCactgtgcagacagacaggaagacaccacagaagaagaaggatgCAGTGAGGGAAACAGGAAGGAGCAGCATCAAGACTTCCTCTCTGTTTAAACACAACCCAGAGATCCCAGAGTTCCACAGACCAGTTGTCTCCCAGTTAAAAGAGAAGATTTTCACCAGTGACTCATTTTCAGACATGGACCTGCACCCACAcctgGTGGCGACACTGAATAAAGTCCTGAATGTTTCCACAGTGACCAgtgttcaGAAACGGACTATCCCAGTTCTCCTGTCAGGACGAGACGCTGTCGTTCAATCTCAGACGGGTTCAGGTAAGACTCTGTCCTACGCCGTCCCCGTGGTTCAGAGTCTGCAGGGGCTCCAGCAGAAGGTCAGCAGGTCCGACGGTCCTCTGGCTGTCGTCATCGTCCCAACAAGAGAGCTCGCCCAGCAGACGTTTCAGACCTTCCAGAAGCTTCTAAAGCCGTTTACCTGGATCGTCCCAGGAGTCCTGatgggaggagagaagaggaaatcGGAGAAGGCCAGGCTTCGTAAAGGAATCAACATCCTGGTGTCAACTCCTGGACGTCTTGTGGATCACATCAAAAACACACTGAGCATCGCCTTCAGTGCTGTTCGCTGGCTGATCCTGGACGAGGCAGACCGgACGTTGGACCTGGGTTTTGAGAAGGATCTGACTGTCATATTAAACAGTCTAAACTCTACAGGACCAAGCAGACAGAACGTCCTGCTGTCTGCTACATTAACACATGGTGTAACTCGGTTAGTAGACGTTTGTCTTCAGGACCCAGTTAACATCCACGTGTCTGGCTCCGCCTCCTCTGACCTCACCACCACCAGCTCTgctgtgacctctgaccccagCACAGCCAGCCAATCGGAGAGCTTTGCTTTGCCAGAGGCTTTGAAGCAATATGTGGTAGTGGTTCCCAGTAAGATCAGACTGGTCTGTCTGGCTGCTTTCATACTGGACAAATGCAAGTTTTCTCAGAACAACAAACTTATCGTCTTCTTCTCGAGCTGCGAGGCCGTCGAGTTCCTGCACTCCCTCTTCACCTCCGTCCTCTCTGGGCCCTCCACCGATCAGAAGCCTCAGCTCTGCTTTCTGCGTCTCCATGGCAACATGAAGCAGGAGGAGCGCTCTGAGGTCTTCCAGCAGTTTTCCGTGTCTAATTCTGGAGTCCTGCTGTGTACGGATGTCGCAGCCAGAGGTCTGGACCTTCCACAGGTCACCTGGATCATTCAGTACACTCCTCCCACGGCAGCAGCAGAGTACGTTCATCGTGTCGGTCGGACGGCCCGTATCGGAGGAAGAGGtagcagcctcctcttcctcactccTGCTGAGACCGCCTTCATCACCGAACTGGCCAAACACCACATCAGCCTATCAGAGCTGAAGCTGCTGGACATCCTGTCCAGTCTCATGATGGATGACACCTACAAGGGGCGGGGCAAATACTACAGCAAGagttCGTCTAAAGCCCTGGAGCAGGAGACCAGAGAGAGAGCGACGGTGCTGCAGACAGAATTTGAGAACTTTGTTCACTCAGACGCTCAGTCAGTGCAGAACGCTAAGAAAGCGCTGCAGTCCTTCCTGCGGGCATACACCACCTACCCTGCCCACCTCAAACACATCTTCCACATCCGCTCCCTCCACCTGGGACACACCGCCAAGAGCTTCGGCCTCAGAGACGCTCCGCAGGGCCTGAACGCTGCCCCGGGCCCCGGGGCCAAgacccacaacaacaacaagaaccagaaccagaacaaGGGGACCAGCAGCCAGAAGGCAGGAggaaagagGTTCTCTCGCGGTCAGAGGGAGGTCAGCCTGCTCTGCTCCGAGTTCTCTAGCGGGTTGGAGGGAGCAGACGCCAAGaccaagaagaaaaagaagaagacgacCACATTTGGTCAgtcaggagaggaggaagaggaggaggagtaatGAGGAGGTGCAGCAGCTGGAGGGCCTATGAGCGAAGGTGACGACCTGCAAACAGCTGACTGACTCGCTGTTACAGACACACATCAGACTTTTAGTTGATTAGATAATGAATCTGGATCAGAGTGCAGACGCGGACCTGAAGTCCAGGAGACGTCTGACTGTGTTCAGACAGATCGATGACATTTACATTGCACACAAAGTCAACAGAAAGACATGATTAGTAAATGTCGAAATTTGAGTGAAACATTGACGGTTATGCTGAAGTCTTCATGTAAAAACAGGAGTCTGCGTCTGTTGCATGTTAGCTTCCAGCTAACGTCGGTACAGTGGGTTCAAATCCAGTGAACGATGCTTCACTCTTCCTGTctgaacacacatttaaaatatctgATATAAAGTTTTCTGAATTTGACAGGAAACAATCTCAGAATACAGTTTTTCATACATGACTCTTCTCTGTAAGACATCTTTAAAATGTTGTTGTACTGAAATGAACCCAGGCTCCCCTCTGCCTCAACAGTTGCTTTACCTTTCCATCTTTTTTAAAGGCTAGATTTGGTTTCAAGATGGACTCTGATGGCTTTAACAACCTGGTGTTTCAGCACAAACTGAAGACCAGACGTGTTTTTATTGTTGAAGTCTTCACAGATTCAGGATAATGTGAACAGGACATTTGTGTGTtctttaaatatgaatatttctaCTGTTTGATGACTTTGATgaagatttatttttctttgttggaaaataaaatgtaatttttgctcTTTGAGGGTAGAACCTAC
>XM_039803814.1
TCCACAAAATCAGCTGTGAAGGAGACGGGGCTTCAGTGACGTACCAGGAAGAGATCCCCACGCGTGTAGTTTGGTTGTGTTTTACGGTGTGCTGATGATGTCatcggcagcagcagcagaggaccAGCTGTGTCTGAACATCTGCAGCAGTTTCTCCCCCTCTTCATCCCCCCGGTCAAAACCTCTGACTACTCAGCAGAGATGGGCCAGAAAGAAGCACAACGCCGAGAAGAGAAGGATCAACTcctcagaggaggaggagaagaagagaggctCCTTCAAACAGAGGAGACTGGACAAGAAAGccgaggaagaagaagaagaagaagaggaggaggaggaggtgcagACTGAAGCTTCTCCTCCTGCAGACACTCAGacagacaggaagacaccacagaagaagaaggatgCAGTGAGGGAAACAGGAAGGAGCAGCATCAAGACTTCCTCTCTGTTTAAACACAACCCAGAGATCCCAGAGTTCCACAGACCAGTTGTCTCCCAGTTAAAAGAGAAGATTTTCACCAGTGACTCATTTTCAGACATGGACCTGCACCCACAcctgGTGGCGACACTGAATAAAGTCCTGAATGTTTCCACAGTGACCAgtgttcaGAAACGGACTATCCCAGTTCTCCTGTCAGGACGAGACGCTGTCGTTCAATCTCAGACGGGTTCAGGTAAGACTCTGTCCTACGCCGTCCCCGTGGTTCAGAGTCTGCAGGGGCTCCAGCAGAAGGTCAGCAGGTCCGACGGTCCTCTGGCTGTCGTCATCGTCCCAACAAGAGAGCTCGCCCAGCAGACGTTTCAGACCTTCCAGAAGCTTCTAAAGCCGTTTACCTGGATCGTCCCAGGAGTCCTGatgggaggagagaagaggaaatcGGAGAAGGCCAGGCTTCGTAAAGGAATCAACATCCTGGTGTCAACTCCTGGACGTCTTGTGGATCACATCAAAAACACACTGAGCATCGCCTTCAGTGCTGTTCGCTGGCTGATCCTGGACGAGGCAGACCGgACGTTGGACCTGGGTTTTGAGAAGGATCTGACTGTCATATTAAACAGTCTAAACTCTACAGGACCAAGCAGACAGAACGTCCTGCTGTCTGCTACATTAACACATGGTGTAACTCGGTTAGTAGACGTTTGTCTTCAGGACCCAGTTAACATCCACGTGTCTGGCTCCGCCTCCTCTGACCTCACCACCACCAGCTCTgctgtgacctctgaccccagCACAGCCAGCCAATCGGAGAGCTTTGCTTTGCCAGAGGCTTTGAAGCAATATGTGGTAGTGGTTCCCAGTAAGATCAGACTGGTCTGTCTGGCTGCTTTCATACTGGACAAATGCAAGTTTTCTCAGAACAACAAACTTATCGTCTTCTTCTCGAGCTGCGAGGCCGTCGAGTTCCTGCACTCCCTCTTCACCTCCGTCCTCTCTGGGCCCTCCACCGATCAGAAGCCTCAGCTCTGCTTTCTGCGTCTCCATGGCAACATGAAGCAGGAGGAGCGCTCTGAGGTCTTCCAGCAGTTTTCCGTGTCTAATTCTGGAGTCCTGCTGTGTACGGATGTCGCAGCCAGAGGTCTGGACCTTCCACAGGTCACCTGGATCATTCAGTACACTCCTCCCACGGCAGCAGCAGAGTACGTTCATCGTGTCGGTCGGACGGCCCGTATCGGAGGAAGAGGtagcagcctcctcttcctcactccTGCTGAGACCGCCTTCATCACCGAACTGGCCAAACACCACATCAGCCTATCAGAGCTGAAGCTGCTGGACATCCTGTCCAGTCTCATGATGGATGACACCTACAAGGGGCGGGGCAAATACTACAGCAAGagttCGTCTAAAGCCCTGGAGCAGGAGACCAGAGAGAGAGCGACGGTGCTGCAGACAGAATTTGAGAACTTTGTTCACTCAGACGCTCAGTCAGTGCAGAACGCTAAGAAAGCGCTGCAGTCCTTCCTGCGGGCATACACCACCTACCCTGCCCACCTCAAACACATCTTCCACATCCGCTCCCTCCACCTGGGACACACCGCCAAGAGCTTCGGCCTCAGAGACGCTCCGCAGGGCCTGAACGCTGCCCCGGGCCCCGGGGCCAAgacccacaacaacaacaagaaccagaaccagaacaaGGGGACCAGCAGCCAGAAGGCAGGAggaaagagGTTCTCTCGCGGTCAGAGGGAGGTCAGCCTGCTCTGCTCCGAGTTCTCTAGCGGGTTGGAGGGAGCAGACGCCAAGaccaagaagaaaaagaagaagacgacCACATTTGGTCAgtcaggagaggaggaagaggaggaggagtaatGAGGAGGTGCAGCAGCTGGAGGGCCTATGAGCGAAGGTGACGACCTGCAAACAGCTGACTGACTCGCTGTTACAGACACACATCAGACTTTTAGTTGATTAGATAATGAATCTGGATCAGAGTGCAGACGCGGACCTGAAGTCCAGGAGACGTCTGACTGTGTTCAGACAGATCGATGACATTTACATTGCACACAAAGTCAACAGAAAGACATGATTAGTAAATGTCGAAATTTGAGTGAAACATTGACGGTTATGCTGAAGTCTTCATGTAAAAACAGGAGTCTGCGTCTGTTGCATGTTAGCTTCCAGCTAACGTCGGTACAGTGGGTTCAAATCCAGTGAACGATGCTTCACTCTTCCTGTctgaacacacatttaaaatatctgATATAAAGTTTTCTGAATTTGACAGGAAACAATCTCAGAATACAGTTTTTCATACATGACTCTTCTCTGTAAGACATCTTTAAAATGTTGTTGTACTGAAATGAACCCAGGCTCCCCTCTGCCTCAACAGTTGCTTTACCTTTCCATCTTTTTTAAAGGCTAGATTTGGTTTCAAGATGGACTCTGATGGCTTTAACAACCTGGTGTTTCAGCACAAACTGAAGACCAGACGTGTTTTTATTGTTGAAGTCTTCACAGATTCAGGATAATGTGAACAGGACATTTGTGTGTtctttaaatatgaatatttctaCTGTTTGATGACTTTGATgaagatttatttttctttgttggaaaataaaatgtaatttttgctcTTTGAGGGTAGAACCTAC

Function

symbol description
ddx31 Predicted to enable several functions, including ATP binding activity; RNA binding activity; and RNA helicase activity. Predicted to be involved in ribosome biogenesis. Predicted to be active in nucleus. Orthologous to human DDX31 (DEAD-box helicase 31).

NR:

description
probable ATP-dependent RNA helicase DDX31 isoform X1

GO:

id name namespace
GO:0006200 obsolete ATP catabolic process biological_process
GO:0005524 ATP binding molecular_function
GO:0003723 RNA binding molecular_function

KEGG:

id description
K14806 DDX31, DBP7; ATP-dependent RNA helicase DDX31/DBP7

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039803811.1 False 3129 mRNA 0.50 21 14566031 14580163
XM_039803812.1 True 3159 mRNA 0.50 21 14566031 14579817
XM_039803814.1 False 3111 mRNA 0.50 21 14566031 14580163

Neighbor

gene id symbol gene type direction distance location
qsox2 qsox2,LOC102781541 coding downstream 18168 14535268 ~ 14547863 (-)
LOC120559985 nacc2,LOC102304562,LOC102778489,LOC103397964,LOC101483941 coding downstream 33272 14515799 ~ 14532759 (-)
asgrl1 NA coding downstream 109719 14454088 ~ 14456312 (-)
LOC120561207 NA coding downstream 118016 14445463 ~ 14448015 (-)
hnf1a hnf1a coding downstream 166064 14392607 ~ 14399967 (-)
ak8 NA coding upstream 1921 14582084 ~ 14599142 (-)
tsc1a tsc1 coding upstream 20098 14600261 ~ 14625197 (-)
LOC120560533 NA coding upstream 408984 14989147 ~ 14991145 (-)
LOC120560022 slc18a1,LOC100703472,LOC106527823 coding upstream 465719 15045882 ~ 15064841 (-)
ppiaa LOC107103142,LOC106904245,LOC103470758,LOC106953379,LOC103129635 coding upstream 490104 15070267 ~ 15076395 (-)
LOC120560921 NA non-coding downstream 6302 14559086 ~ 14559729 (-)
LOC120560922 NA non-coding downstream 9532 14554203 ~ 14556499 (-)
G61586 NA non-coding downstream 80494 14485242 ~ 14485537 (-)
LOC120561033 NA non-coding downstream 99677 14460926 ~ 14466354 (-)
G61566 NA non-coding downstream 142220 14417175 ~ 14423811 (-)
G61601 NA non-coding upstream 49448 14629611 ~ 14630973 (-)
G61647 NA non-coding upstream 218757 14798920 ~ 14799149 (-)
G61631 NA non-coding upstream 222401 14802564 ~ 14867657 (-)
G61695 NA non-coding upstream 385144 14965307 ~ 14965785 (-)
LOC120560531 NA non-coding upstream 403304 14983467 ~ 14985185 (-)
si:ch73-138n13.1 LOC102794857,LOC107084631 other downstream 201705 14328151 ~ 14364326 (-)
G61264 NA other downstream 976699 13589039 ~ 13589332 (-)
LOC120561038 LOC102778062,LOC101486272,LOC102199534,LOC108245630 other downstream 2010746 12293707 ~ 12555285 (-)
LOC120561001 whrn,LOC102797690 other downstream 2504385 11901650 ~ 12061646 (-)
abca2 abca2 other downstream 2972371 11285385 ~ 11593660 (-)
trnaa-agc_14 NA other upstream 358812 14938975 ~ 14939047 (-)
trnaa-agc_15 NA other upstream 364333 14944496 ~ 14944568 (-)
trnae-cuc_15 NA other upstream 368596 14948759 ~ 14948830 (-)
trnas-gcu NA other upstream 371339 14951502 ~ 14951583 (-)
trnas-gcu_1 NA other upstream 387516 14967679 ~ 14967760 (-)

Expression


Co-expression Network