hs3st1l2 (LOC102790965,LOC100694141,LOC103362344,LOC102206456,LOC102298111)


Basic Information

Item Value
gene id hs3st1l2
gene name LOC102790965,LOC100694141,LOC103362344,LOC102206456,LOC102298111
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 31273898 ~ 31300445 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039803819.1
tccctctctcccagtCACTCAGTCAGTTGCAGCAACACGCTCACCAGGGTTGGCAGCACAAAGCAGAGTCGCTCTTTTACcaccttgcacacacacacacacacacacacacacacacacacacacacacacaaacacacacacacaatcactctcacacacaacgCATTACACACTCCTGAGACACACGCTCAGACGGGAGCTGAAGCAGAACTGACGAGAGGAAGGAAgcaaggaggaaagagagagaccgGTAAAGAGAAGATAAGAGAAGACTaagtaaaagaagaagaagaagaagaagagaaagtaaagatacattttggaaaaacatCAATCAGGTTATCCAATTGAAGAGCTTCCTCCTAAGGCCTCCTGCTGACTGATAACAAGCACAACTCTGTACAAGTGTGGGAGCTTAATGAGTTTGTGCACATAACCTCCACgccacctctgtgtgtgtttgtttggcaCCATGCTGTGGACAGTGATACtagcgctgctgctgcttctgctgctgcagaCTCAGCTGTCTGTGTGCTTAAGGGAATTACGCAGCGGGGGTTCCAGCTCCCCTGCctactcctcttcatcatcctcttcctcctccacttaCAATGCCACCCAGCAGCGGCTGCCCGGAGTGATTATTATTGGCGTGCGAAAAGGCGGCACCAGAGCCCTGCTGGAGATGCTCAACCTGCACCCAAATGTGGAAGTGGCAAAGGCCGAGGTGCACTACTTCAACGTGGAGGAGCACTACCGCCGAGGCCTGGCCTGGTACCGAGCCCAGATGCCCTTCACCCTCCCTGGACAGCTGACAGTGGAGAAGACCCCTGGCTACTTCGCGGCCCCTCAGGTTCCTGTACGTGTCTGGGACATGAACCCCGCCGTCCGCCTGTTGCTCATCGTCCGGGACCCGGCCGAGAGGCTGGTCTCTGACTACACCCAGGTCCTCCACAACCGCCTGACCCGCCACAAGACCTACCAGCCTCTAGATGAGCTCCTGATCCACAAGGGCCACATTGACCCTGGGTACAAGGCGCTGCAGAGGAGCCTGTACCACCAGCATCTGGCCCGCTGGCTGGAGGTCTTCCCCAGGGAGCAGTTCCACGTGGTGGACGGCGACGCGCTCATTCGGGATCCCTTCCCTGAACTGAGGAAGGCTGAGAGGTTTCTGGACCTGCCGCCCAAGATAAGCCCCAGCAACTTCTACTACAACACCACCAAGGGCTTCTACTGCCTCCTGTCTGCCGGACACGACAAGTGCTTGGACGAGTCTAAAGGCAGGCCGCATGCGCCGCTGAGCACCCAGGCCTTTAAGAAGCTTTGTCGCTACTTAAGGAAGCCTAACAAGTTGTTCTTTGAAATGGTGGGGAGGTCCTTTTCCTGGTGCTGATCCagtggtgaaaagcaactgtgAAGAAGACAAAACACCTCCTGCACGATTCCAACACATTCAGGGACACAGAAGGAGCAAGAAActgtggtttgtgtgtttttgtaggtAGATGAGTGGCAAGATTTTAGTTCAATTAAAGTCATAAACATCTCTTGTTGTTGATACCTACTCAGGTATAAATGTGGCCAACAAAAGCAGCACATCTGTGTGTGAGAATATGTGGGGAATTCAAACTGCTCGTGTTGAACACGTGGCCAACACAGTCCTTTACCATGACCGATACTGGTGCCTCCTTGGTTGGATAGACTCACTTGACGAAGCTACGACAACCGTGCCATACGCAGGTCTGAAAGTCAAAACACGTGCTCATTTGTAGGGtgttaaaagaaaatgtgcAGACTTTGAAGTGATGTATAAATAGACAAGTGGTGAAACGATGGTTGAATGACTGAATTGTTGCACTATGAACTCTGATTGCATTAAAAAAAGAGGTTCAATGTTCAATGTAGACAATTTTTAAACGGAAACTTTCTTGCTTTGATTTCTCTCAACAGTTgtaacatgtttgtgtgtttgtaaaaaaaatattgagttGAGTCATCTTGATtacttcattattttttttattttacaaggcTGACTTTTAGATGTTCAGTAAAAAATAtcattttttaagcttttttaaaaGTAGCCAACTTGAAAACTTGTTTTTGGTTTCTCTTTACTTTCAAGGCCAATGTATCGctagtttgtgttttttcaaGACACCCTTCTAATAAATGTGTTCAGTCCTACAGTC
>XM_039803820.1
taatccagctgctagctaaagGTTATCCAATTGAAGAGCTTCCTCCTAAGGCCTCCTGCTGACTGATAACAAGCACAACTCTGTACAAGTGTGGGAGCTTAATGAGTTTGTGCACATAACCTCCACgccacctctgtgtgtgtttgtttggcaCCATGCTGTGGACAGTGATACtagcgctgctgctgcttctgctgctgcagaCTCAGCTGTCTGTGTGCTTAAGGGAATTACGCAGCGGGGGTTCCAGCTCCCCTGCctactcctcttcatcatcctcttcctcctccacttaCAATGCCACCCAGCAGCGGCTGCCCGGAGTGATTATTATTGGCGTGCGAAAAGGCGGCACCAGAGCCCTGCTGGAGATGCTCAACCTGCACCCAAATGTGGAAGTGGCAAAGGCCGAGGTGCACTACTTCAACGTGGAGGAGCACTACCGCCGAGGCCTGGCCTGGTACCGAGCCCAGATGCCCTTCACCCTCCCTGGACAGCTGACAGTGGAGAAGACCCCTGGCTACTTCGCGGCCCCTCAGGTTCCTGTACGTGTCTGGGACATGAACCCCGCCGTCCGCCTGTTGCTCATCGTCCGGGACCCGGCCGAGAGGCTGGTCTCTGACTACACCCAGGTCCTCCACAACCGCCTGACCCGCCACAAGACCTACCAGCCTCTAGATGAGCTCCTGATCCACAAGGGCCACATTGACCCTGGGTACAAGGCGCTGCAGAGGAGCCTGTACCACCAGCATCTGGCCCGCTGGCTGGAGGTCTTCCCCAGGGAGCAGTTCCACGTGGTGGACGGCGACGCGCTCATTCGGGATCCCTTCCCTGAACTGAGGAAGGCTGAGAGGTTTCTGGACCTGCCGCCCAAGATAAGCCCCAGCAACTTCTACTACAACACCACCAAGGGCTTCTACTGCCTCCTGTCTGCCGGACACGACAAGTGCTTGGACGAGTCTAAAGGCAGGCCGCATGCGCCGCTGAGCACCCAGGCCTTTAAGAAGCTTTGTCGCTACTTAAGGAAGCCTAACAAGTTGTTCTTTGAAATGGTGGGGAGGTCCTTTTCCTGGTGCTGATCCagtggtgaaaagcaactgtgAAGAAGACAAAACACCTCCTGCACGATTCCAACACATTCAGGGACACAGAAGGAGCAAGAAActgtggtttgtgtgtttttgtaggtAGATGAGTGGCAAGATTTTAGTTCAATTAAAGTCATAAACATCTCTTGTTGTTGATACCTACTCAGGTATAAATGTGGCCAACAAAAGCAGCACATCTGTGTGTGAGAATATGTGGGGAATTCAAACTGCTCGTGTTGAACACGTGGCCAACACAGTCCTTTACCATGACCGATACTGGTGCCTCCTTGGTTGGATAGACTCACTTGACGAAGCTACGACAACCGTGCCATACGCAGGTCTGAAAGTCAAAACACGTGCTCATTTGTAGGGtgttaaaagaaaatgtgcAGACTTTGAAGTGATGTATAAATAGACAAGTGGTGAAACGATGGTTGAATGACTGAATTGTTGCACTATGAACTCTGATTGCATTAAAAAAAGAGGTTCAATGTTCAATGTAGACAATTTTTAAACGGAAACTTTCTTGCTTTGATTTCTCTCAACAGTTgtaacatgtttgtgtgtttgtaaaaaaaatattgagttGAGTCATCTTGATtacttcattattttttttattttacaaggcTGACTTTTAGATGTTCAGTAAAAAATAtcattttttaagcttttttaaaaGTAGCCAACTTGAAAACTTGTTTTTGGTTTCTCTTTACTTTCAAGGCCAATGTATCGctagtttgtgttttttcaaGACACCCTTCTAATAAATGTGTTCAGTCCTACAGTC

Function

NR:

description
PREDICTED: heparan sulfate glucosamine 3-O-sulfotransferase 1-like

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0008146 sulfotransferase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039803819.1 True 2201 mRNA 0.48 3 31273898 31300445
XM_039803820.1 False 1881 mRNA 0.49 3 31297404 31300445

Neighbor

gene id symbol gene type direction distance location
LOC120559964 NA coding upstream 32858 31237268 ~ 31241040 (+)
LOC120561480 NA coding upstream 145138 31126860 ~ 31128760 (+)
LOC120561479 NA coding upstream 149224 31122558 ~ 31124674 (+)
si:dkey-174n20.1 LOC104959464,LOC104920648,LOC101478912,LOC102310039,LOC100693286 coding upstream 151987 31117825 ~ 31121911 (+)
znrf3 znrf3 coding upstream 266601 30928746 ~ 31007297 (+)
LOC120560681 LOC108242800,LOC106510782,LOC101474983 coding downstream 14854 31315299 ~ 31316422 (+)
LOC120561065 NA coding downstream 156055 31456500 ~ 31461444 (+)
LOC120560109 NA coding downstream 184618 31485063 ~ 31489526 (+)
LOC120560726 LOC103353430,LOC108242814,LOC103397877 coding downstream 212863 31513308 ~ 31565163 (+)
dapk1 dapk1 coding downstream 269597 31570042 ~ 31660267 (+)
G66015 NA non-coding upstream 119730 31130041 ~ 31154168 (+)
G65958 xbp1 non-coding upstream 364428 30906356 ~ 30909470 (+)
G65951 NA non-coding upstream 436124 30754359 ~ 30837774 (+)
G65890 vsig10 non-coding upstream 733059 30539817 ~ 30540839 (+)
G65883 ksr2 non-coding upstream 842157 30431386 ~ 30431741 (+)
G66072 NA non-coding downstream 1065 31301510 ~ 31301746 (+)
G66071 NA non-coding downstream 10498 31310943 ~ 31311447 (+)
G66069 NA non-coding downstream 17131 31317576 ~ 31318474 (+)
G66092 LOC103362337,LOC101472255,LOC102204493,LOC102311726,LOC100707713 non-coding downstream 50753 31351198 ~ 31409156 (+)
G66107 NA non-coding downstream 109510 31409955 ~ 31418260 (+)
LOC120561064 NA other upstream 380618 30857580 ~ 30893280 (+)
G65899 taok3 other upstream 695739 30574086 ~ 30578159 (+)
LOC120560820 NA other upstream 1022379 30246887 ~ 30251519 (+)
fbxo21 fbxo21 other upstream 1061790 30186848 ~ 30212108 (+)
ubac1 ubac1 other upstream 1922142 29344580 ~ 29351756 (+)
dmrt3a dmrt3 other downstream 507350 31807795 ~ 31811553 (+)
adamts3 adamts3,LOC100699019,LOC101479253,LOC102313231 other downstream 732131 32032576 ~ 32209534 (+)
G66231 NA other downstream 825848 32126293 ~ 32136966 (+)
G66256 slc4a5,LOC102211952,LOC101484802 other downstream 1022062 32322507 ~ 32329990 (+)
G66263 LOC106536102 other downstream 1064415 32364860 ~ 32369984 (+)

Expression


Co-expression Network