LOC120560939


Basic Information

Item Value
gene id LOC120560939
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 15615792 ~ 15622228 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039803838.1
GCCTTAGCCAACGTTACCTGGATTATTCTGTgaactttctttaaaaaatgccCTGAAAGAAGGATTTAAAAAAGCGAagataacaacaaaataaataaatatacaggaAAAAGACAAGTAGCTATATAACTATGGCGGATGTAATCGGTTCTGAGGACAAAGAGAAGTCGTTATATTTGATACAAATTAAATATCTGGATGAGCAGTTGGAAagCCTCAAAGCACACGTGCCTTTATCCGGCAGATATCAGCTTCAGTGTGACGAGCTGGAGCAGCAGAACAAGGACCTGGCCTCTCAGTACAGCGCGCTGGAGAAGGACAAGCAAGACATCACTGAGTACCTGAAACACGCTGTGCTTGGCAAAGACAAGGAGGCGGAGGAGCTGGCTGCGCAGCTGGAGAGTCAGCAGCGGATTGGCCAGCAGGACAGAGAGGCCCGGGTGCTACAGCAGAGCCAGGAAGTTCAGGAGCTGCAGGACCAGATCGATGAGCTGACCTCAGAGAGCAGATTGCTGGTGGCAAAGTttgaggagcagcaggagctgGCGGAGCAGCTGGAGCAGCTGTTGCAGCGGCAGTCCGAAATGGAGTTTCTGAGGAAGCAGCTGGTTAGTGAGAACGAGGAGCACGACGCTGCCATCGAGAACCTGAAGAATGACGCAGAGTCGGAGAGGAACAAGATGTTCGAGGTCAGGTGGGGCACGTTGGAGGTTTGCGTTAGGAAGAAGGCCTCACACATCATCCAGGAGGAGAGGGCTCAGCACAGAGAGCTCCGGGAGAAGGTCGAAGAACTTCTGGACAGGAACACGGAACTGTGGAGTGAGAAGAACGAGCTGCGAGACACAGAagattttcttctctttcagtTGGACAACATGAAGGAAGATATTGACAAGGTCAGCAAGAAGAGCTTCACCAGCAAGAAGGAGGTGGAGCAGCTGACGAAGACCTGCCAGCAGCTGAGGGCCGAGCTAAAGAGATGTAGCGCCGCCTACGACACCACGCTGACCAAGAAAGAGGCTCTCAGACAGCGCCTGGCTTCAGTGTCAGCAAAGTGCCATCAGAAAACAGCCCAGGCAGGTCAGCTGAGGGCCGAGCTGCAGAGGGAGAGCAGCGCGAGGAGGCAGCTGGAGGCCATCGTGCAGGAAGCAGTCCTGATTCTCAGCCACATCTTGATGGACTCAGAGAAGGTGTCCGAGACTCAGTGGAAGAGGCTGCAGGAGATCCTGCAGAGCCCCCCCTCCACTCCTGAGGAGGAACCACAGACCTGTGACCCCGAAGCAGCCAGagctcaGACCCTGAACATCGCCACAGATCCGTTGTTCCTGTTCGCCCGCTACAGACCAGGCGACCTGGGCCTCGTACCCCGACCCATGTGGAAACAGAAAGCAGCCTTCTCCAGGTCACGCCATCCTGGTGCCTCTCAACAGGAAACTGTGCAGTCAGAAGATATCCAGCTGTGATCCAGAGGCCGAAGCCTCCACCTCTGCAGACTGAAAcgtattataaagtgttaccaaagtcACATCATCGTGAAGGATGGGGTGGGATTCAATCGGCGGCTCACATGGCTGGTCTTCATGGACACATTTGTTTAATCGCTCATTGTGTTGTTAAGGTGTATCCACTGACATCATACGCACAAAGCCACTCAACACCCACACTGTCATAAAGGATGCGTGGCAGATATCACAAcagg
>XM_039803839.1
GCCTTAGCCAACGTTACCTGGATTATTCTGTgaactttctttaaaaaatgccCTGAAAGAAGGATTTAAAAAAGCGAagataacaacaaaataaataaatatacaggaAAAAGACAAGTAGCTATATAACTATGGCGGATGTAATCGGTTCTGAGGACAAAGAGAAGTCGTTATATTTGATACAAATTAAATATCTGGATGAGCAGTTGGAAagATATCAGCTTCAGTGTGACGAGCTGGAGCAGCAGAACAAGGACCTGGCCTCTCAGTACAGCGCGCTGGAGAAGGACAAGCAAGACATCACTGAGTACCTGAAACACGCTGTGCTTGGCAAAGACAAGGAGGCGGAGGAGCTGGCTGCGCAGCTGGAGAGTCAGCAGCGGATTGGCCAGCAGGACAGAGAGGCCCGGGTGCTACAGCAGAGCCAGGAAGTTCAGGAGCTGCAGGACCAGATCGATGAGCTGACCTCAGAGAGCAGATTGCTGGTGGCAAAGTttgaggagcagcaggagctgGCGGAGCAGCTGGAGCAGCTGTTGCAGCGGCAGTCCGAAATGGAGTTTCTGAGGAAGCAGCTGGTTAGTGAGAACGAGGAGCACGACGCTGCCATCGAGAACCTGAAGAATGACGCAGAGTCGGAGAGGAACAAGATGTTCGAGGTCAGGTGGGGCACGTTGGAGGTTTGCGTTAGGAAGAAGGCCTCACACATCATCCAGGAGGAGAGGGCTCAGCACAGAGAGCTCCGGGAGAAGGTCGAAGAACTTCTGGACAGGAACACGGAACTGTGGAGTGAGAAGAACGAGCTGCGAGACACAGAagattttcttctctttcagtTGGACAACATGAAGGAAGATATTGACAAGGTCAGCAAGAAGAGCTTCACCAGCAAGAAGGAGGTGGAGCAGCTGACGAAGACCTGCCAGCAGCTGAGGGCCGAGCTAAAGAGATGTAGCGCCGCCTACGACACCACGCTGACCAAGAAAGAGGCTCTCAGACAGCGCCTGGCTTCAGTGTCAGCAAAGTGCCATCAGAAAACAGCCCAGGCAGGTCAGCTGAGGGCCGAGCTGCAGAGGGAGAGCAGCGCGAGGAGGCAGCTGGAGGCCATCGTGCAGGAAGCAGTCCTGATTCTCAGCCACATCTTGATGGACTCAGAGAAGGTGTCCGAGACTCAGTGGAAGAGGCTGCAGGAGATCCTGCAGAGCCCCCCCTCCACTCCTGAGGAGGAACCACAGACCTGTGACCCCGAAGCAGCCAGagctcaGACCCTGAACATCGCCACAGATCCGTTGTTCCTGTTCGCCCGCTACAGACCAGGCGACCTGGGCCTCGTACCCCGACCCATGTGGAAACAGAAAGCAGCCTTCTCCAGGTCACGCCATCCTGGTGCCTCTCAACAGGAAACTGTGCAGTCAGAAGATATCCAGCTGTGATCCAGAGGCCGAAGCCTCCACCTCTGCAGACTGAAAcgtattataaagtgttaccaaagtcACATCATCGTGAAGGATGGGGTGGGATTCAATCGGCGGCTCACATGGCTGGTCTTCATGGACACATTTGTTTAATCGCTCATTGTGTTGTTAAGGTGTATCCACTGACATCATACGCACAAAGCCACTCAACACCCACACTGTCATAAAGGATGCGTGGCAGATATCACAAcagg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039803838.1 True 1699 mRNA 0.53 9 15615792 15622228
XM_039803839.1 False 1669 mRNA 0.53 9 15615792 15622228

Neighbor

gene id symbol gene type direction distance location
LOC120560853 NA coding downstream 13521 15591345 ~ 15602271 (-)
LOC120560852 NA coding downstream 25356 15581292 ~ 15590436 (-)
LOC120560851 NA coding downstream 38538 15569699 ~ 15577254 (-)
LOC120560846 LOC104943351 coding downstream 100891 15504374 ~ 15514901 (-)
LOC120560845 NA coding downstream 113348 15472070 ~ 15502444 (-)
fam81b NA coding upstream 701 15622929 ~ 15634506 (-)
slf1 slf1 coding upstream 155015 15777243 ~ 15811420 (-)
nr2f1a nr2f1,nr2f1a,LOC107671052 coding upstream 502260 16124488 ~ 16132946 (-)
aqp3a LOC103362379,LOC108242818 coding upstream 890149 16512377 ~ 16519316 (-)
nol6 nol6 coding upstream 909424 16531652 ~ 16546472 (-)
LOC120560849 NA non-coding downstream 71441 15541832 ~ 15544351 (-)
G61894 LOC103373661,LOC101481450,LOC102205139 non-coding downstream 152871 15458833 ~ 15462921 (-)
G61837 ppp2cb,LOC102205414,LOC106587035,LOC100710281,LOC105025380 non-coding downstream 188297 15425551 ~ 15427495 (-)
G61813 mak16 non-coding downstream 309725 15303729 ~ 15306067 (-)
G61742 NA non-coding downstream 435373 15152994 ~ 15180419 (-)
G61956 NA non-coding upstream 151451 15773679 ~ 15777138 (-)
G61993 NA non-coding upstream 315748 15937976 ~ 15939248 (-)
G61996 NA non-coding upstream 360648 15982876 ~ 15983411 (-)
G61998 NA non-coding upstream 474193 16096421 ~ 16100383 (-)
G62001 NA non-coding upstream 494999 16117227 ~ 16141681 (-)
LOC120560838 NA other downstream 213468 15369026 ~ 15402324 (-)
mfsd14bb LOC103398013,LOC102210719 other downstream 337608 15252615 ~ 15278184 (-)
LOC120560831 NA other downstream 383099 15224970 ~ 15232693 (-)
sdhaf1 sdhaf1,LOC102800057 other downstream 397370 15216550 ~ 15218422 (-)
tti2 tti2 other downstream 574412 15029876 ~ 15041380 (-)
LOC120560105 LOC103362503 other upstream 530192 16152420 ~ 16452488 (-)
G62064 NA other upstream 882398 16504626 ~ 16505067 (-)
LOC120561322 NA other upstream 926389 16548617 ~ 16551175 (-)
LOC120560425 NA other upstream 1461251 17083479 ~ 17085821 (-)
G62194 NA other upstream 1501768 17123996 ~ 17124477 (-)

Expression


Co-expression Network