si:dkey-91m11.5 (bcr,LOC106535678)


Basic Information

Item Value
gene id si:dkey-91m11.5
gene name bcr,LOC106535678
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 7766806 ~ 7820472 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039803849.1
CAGGTTGCAAAACAATGAACTTTGGTAGGATTATCCAGTTTTCCCAGCATAACTGAAAAGACAAGTGCGCTGTGTCAGAAAGAAACCTATCTAGCGCTAAGGTTGGACAGGGGCGAATGTTAAGCCAGTTGTTTTCCCTTTTGGGCTAAATATCAAGGCTGAATTTGAGCTACCAACAAAGGATAGTTGTTTTGAAAGTCGGGACCTCGTTTTTTCTTCATCCACCTGACCTGTAACAGCCTGAAGATAACGCCTTCCTGCACAAAACCTTCACGTTCATCACGCTGTGGGACGTTTACtgcctttaaaatgtcagtttCTCTTCCTTATTAGACCATATGGCTTGTAGCTTTCATAGCGTTTTTCAACATTTCCTCGGCAACATATGTTCTGATGAATATCCTCTTGTCGTAATCAGCTTTACCAGGGAACTCTGCTGACTAGCAACAACattttgacttaacgttatcattgattttatttttaattttttggagTGAAGCCTAAATCACATCCATGTAGCCCCTCCTCTTTCTGCTGCAACGAAGAGCCACAACACCAGAGAGCTGGCAGTCAGTCTGACACCAAGCACAGAGGAAGACAGAGGATCTCCAGAGAATAGACGAGCACGAAGAAGAGATCAAGGGATAAACTCACTTCTTGGGACTGTGCCAAAAGGAGTAAAGGACTGGACCAGTGATTTCGCCTCTGTAGGATTTTCTTCCTGTGTTTGTGAGTAAAAACTGTAAACTAAACAGGTTTTCCTCCCTGTAAAGTGGATCCTTAATTACTCTGGAGAACACTTTTCCTTTTTCTGTACTATTAGCACTATGGAAGCTTTAGGCTGTAAACAGTCAAGTGCAGTTCATGCTTTAgaaatgtttgtgttgttaGTTGAATAGTTTATGTCAGAGTAATAACAATGGTTGAACCGGTGGGGTTTGTGGCGGCATGGAGAGCCCAGTTCCCTGAGTCTGATCCCCCTTGCATGGAGCTGAACTCGCTGGGGAACATTGAACAAGAGCTGGACAAATGCAAGACCTCTATCAGGCACTTGGAGAAGGAAGTAAACAAGGAGCGCTTCCGCATGATCTACCTGCAGACTCTGCTTGCAAAAGAGAGGAAGTCTTATGATGGGCAGCGATGGGGATTTAAAAGCACGCCACAAATGAATGATGGAGACCTGCCCAGTGGCCCAGACAGCCAGAGGCCCAACACAGATGAGGCTACagcagaggagcagcagcagcagagagagcctGGCAAGATAGCCAGGTGTAAACCACATCCAGAGGGGGAGGTGGATGGTGCGTCCTCGGCCAAACAGCAGGGTGGGGTGTCACCTGTACGCCAGGAGTCAGATATTGCTGACTTCCCACAGGGCACGGGCTCGGTGGCAGCTCTGAGATCCAACTTTGAGCGCATCAGGAGGGCCAACTCCCACTCGGCCGGAGACGGCAGGGGGTTGTCGGTGAGGAGCGTCCAGGAGAAACCTTTCTATGTCAACATGGAGTACCATCACGAGCGAGGGCTGGTCAAAGTCAACGACAGGGAGGTCTCCGACAAGATCAGCACCCTGGGCAGTCAGGCCATGCAGATGGAGCGCAAGAGGTCCCTGCACTCCCTCCCAGGGAACCTGTCGGCCGCCACAGGGGACGTTGGCAAGGGTGTTCAGAGAGGCAGATCCACCGAGGGGAGCTGCAGCTACAACGGGTCATACGATGACGCCGAGGTCAGCTCGCACTTCCTGAAAGACAGTGTCATCCGTTCCACTGGGGAGAAGTCTGAGCGGCAGCCAGCAGAGTGCCAGCCTTACACCAGCGTGTATGTTGGGGGAATGATTGCTGATGGGGACACCCGAGTCATCCACATTAGGGACCACAGCATAGAGGAGGATGCGCACCTCACCTGGCCGAGACGCTCCTACTCTCCCGGCAGCTTTGATGAAATAGGAGGAGGCTACACGCCAGACTGCAGCTCCAACGAGAACTTAACATCCAGCGAGGAGGACTTCTCCTCGGGCCAGTCCAGCCACGTGTCTCCCAGCCCCACCACCTTTCAGATGTACAGGGAGAAAAGCCGCTCACCCTCCCAGCACTCCCAGCAGTCCTTTGACAGCAGCAGCCCGCCCACACCCCTGTCTCAGAAACGCCTGAAGCAGCAGGTGATTGTGTCCGAGGCCTCCATCCTCGGCGTCGATAAAACGGGCCAGATCTGGCCCGGTGATGGGGACTCCACCACGTCCAGCAGGACCTCTCATGACAACAGTGTTCAAGGAGATCTGGAGGCTCCCTACAACGAGACCCTTCCGTCTTACGGCTACGACCTGGAGCACCCAGACGAGCACCAGCCTCGCCACGACCCACTTTCCTTCACCGGGTCCCCGTCCCCCTCGCCACGACTCTGCTCTCACAGCCGGAGCAGCCGAGACACCCGGTCCTCCGGCTCCCTGGAGTCCACGCTGTCGGTGGAGTTGGATCAGGAGAAGGGGCTGGAGATGAGAAAGTGGGTTCTGTCAGGAATCCTGGCCAGTGAGGAGACTTATCTCAGCCACCTGGAGGCCCTCCTGATACCCATGAAGCCTCTGAGGGCCGCAGCCACAACTTCCCAACCAATGCTGACCATCCAGCAGATAGAGACCATCTTCTTCAACGTGCCAGAGCTTCATGAGATCCACAAGGACTTCTTTGATGCTCTGCTGCCCCGAGTCCAGGACTGGGGCCACCAGCAGTGTGTGGGCGACCTCTTCCAGAAGCTGGCGAGCCAGCTTGGAGTGTACCGGGCCTTTGTGGATAACTACAAGGTTGCTGTGGAGATGGCGGACAAGTGCTGCCAGGCAAATGCTCAGTTTGCAGAGATATCTGAGAATCTCAAAGTCAAAAGCCCAAAGGACTGCAAAGACCAGTCGGCTAAAAATTCACTGGAAActcttCTCTACAAACCTGTGGACAGAGTGACGCGCAGCACACTCGTTCTGCATGACCTCCTGAAGCACACGCCCTCCAGCCACCCGGACCATCCGCTGTTACAGGACGCCCTGCGCATCTCTCAGAACTTCTTGTCCAGTATAAATGAAGAGATCACCCCACGTAGACAGTCCATGACAGTTAAGAAGGGAGAGAACCGTCAGCTGCTCCGGGATCGCTTCATGGTGGAGCTGGTCGAAGGTTCCAGGAAGCTCCGTCACGTCTTCCTTTTCACCGACCTGCTGCTGTGCACCAAGCTGAAGAAACAGGCTGCGGGAAAAGGGCAACAGTATGACTGTAAGTGGTACATCCCACTGGCCGACCTGACCTTCCAGACCATCGAGGACTGCGAGTCCACCCCCATCCCTCTGGTCCAGGATGAGGAGATCGACGCCATTAAGATCAAAATCTCCCAAATCAAGAACGAGATCCAAAGAGAGAAGAGAACCACCAAAGGACCCAAGGCGATCGAGCGACTGAGGAAGAAGTTATCAGAACAAGAGTCTCTGCTGCTTCTCATGTCCCCCAACATGGCGTTCAGAGTGGCCAACAGAAATGGCAAGgGTTTCACCTTTCTCATCTCTTCTGACTATGAACGGGCCGAGTGGAGGGAGATCGTTCGCGAGCAGCAGAAGAAGTGCTTTAAAagcttctctctgacctctctggaGCTGCAGATGCTCACTAACTCATGTGTGAAACTCCAGACTGTTCACACCATTCCAATGACCATGAATAAGGAAGATGATGAATCTCCCGGTTTGTACGGCTTCCTAAATGTCATCGTCCACTCTGCATCAGGGCTGAAACACAGCTTAAACCTTTACTGCTCTCTGGAGGTGGATTCCTTCGGCTACTTTGTCAACAAAGCCAAAACACGTGTGTACAGAGACTCTACAGAGCCCAACTGGAACGAGGAGTTTGAGATTGAACTGGAGGGCTCTCAAACTGTGAGGCTGCTCTGCTATGAGAAGTGCAAAGAGGACGGAGAGATCACAGACAAGATCCTGGCCAAAGGACAGATCAAGctgGATCCTCAGACATTGCAAAATAAAGACTGGCAGAGGACCGTCATCGCCATGAATGGGATCGAGGTGAAGCTTTCGATGAAGTTCACCAGCCGAGAGTTCAGTCTGAAGCGGATGCCTTCACGGAAACAGTCCGGCGTCTTTGGAGTGAAGATCAACGTAGTAACTAAGCGAGAACGCTCCAAGGTTCCCCTCATTGTGAGACAGTGCGTGGAGGAAATTGAGCGACGAGGGATGGACGAGGTGGGAATCTACAGAGTGTCTGGCGTCGCAACTGATATCCAGGCACTGAAGGCTGCCTTTGATTCAAACAACAGAGACGTGTCTGTCATGATGAGTGAGATGGACGTAAACGCCATCGCTGGAACACTGAAGCTGTATTTCCGCGAGCTGCCCGAGCCTCTTTTCACTGATGAGTTGTACCCCAACTTTGCTGGAGGCATCGCTCTCTCTGACAGTGTGGCCAAGGAGAGCTGCATGCTCAACCTGTTGCTGTCTCTACCAGAGCCCAATCTGGTCACCTTCGTCTTCCTGCTCGACCACCTTAAAAGGGTGGCTGAAAATGAGAGCATCAACAAGATGTCTCTGCACAATCTGGCCACCGTTTTTGGTCCCACTTTGCTGCGGCCCTCTGAAAAAGACAGCAAAATCTCAAACAGCTCGCAGCCAATCTCCATGAACGACAGCTGGTCTCTAGAGGTCATGTCTCAGGTGCAAGTCCTTCTCTACTTCCTTCAGCTGGAGAGCATTCCAACACCTGACAGCAAACGTCAAAGCCTTCTCTTCACTACCGAAGTATAGCAGGAACATCATGCACTTGTCTGTAATTGTTCTGTTCAGAGGCAGAATGTCTGCTGCCTAATGAGGTGGATGCTGCTGAGCAGCCATGACTCTGAGGATGCTTTATTTAGCCACTAGGTGGAACCATCAACGCATTGTAAACTGTAAACAGCCCCCATGCCCAAAGCCATTCCTTTTGGAGATGTGATGAGCACGTGTGTTCTGTGTATTTACAAGCTTGCCTGCTGTGTCAGTAAAAGACATACCATTATGATGtatagacatttttttaaatttaatttaaatatcaaGGAGCGTTATTTACTGTACTTTGATATTTTACACTGCCCTGTTCTGTCACTGTGCACATTAGCTCCATATTCACAGACAGGGGTTTCTGCTGTATTTGGATTTTGTAAGATGTATTTCTGTGAATGGATAATAGTTGAATGGTTGGATGAATGGACATATGTTTTTCATGGCTATACATGTTTGTTTCCCCCCCAGAAACGTTTGTCTTGGTTGAGAGCTCACCTGTGCCTATGTTTCCTTGCTGACGATGACCAATAGAACATTTCAGTTACCCTCATGTTTACACACACTCTTCATTTTGTACAGAATTTAAAAAGTATGAGACTGAAAACTGTAGTTTACACACAGCAACATGCAGGCATGTTGACCTAACCATTTGAAGTGTGTGCTATCTGTGCTATACAATTTGTATGGTTCTTCTGGTGGTGTCCGAGCCAACGTTCATGTAGATatgagtgctttttttttttggaagtggTACAGAGAAGTGAAAGGCAAATCATTCCAGGAAAAGGCGAGGCCTAATCCTTCCACCCATGGAATGTATACTGTGCTGTGTAGAATTTTAAATCACAGTTGTCTTTTGTCCATATTTCATATGTTTTGTgtccatattgttgttgttttttctgttgaTGTTATTGCTTCCGGCATTCCTTTTCTTTAGTCTACCTATATAGGACAAAACCACACTGCTGTAGAAATGAGAGCACCATCTCAAATACCAAATGTTGCCTAGTGGGGCCCTGGAAGCATAGTGATTCACCCATATCCAAGTCTCCTGGCTTATTCATACGTTTATCATCCACATAGCTAGTATTACTTACTGAAAATATACTGTTCTTtgcattaatattttttttctcccaaatCACTACAAGTATTCAAACACTTGTTAGCACAAACTATAACCCTACAGGCTTGTGATTTATGTAAAATAAGCAATAACTCTTAGTGATTCTTAGGATGAGACTAGTGGGGAGTGTATGTATgatttatgtaaataaaaaaattggtaACATTA
>XM_039803851.1
aatttcTCTAGCACTAATCAGTTATTGGGCCGAGAGGCCCGTGTTTAGGCTACCTGAAACTGTAGTTTACCAACTCTTCGCAGCAGCAGGCATGAGCACGTTGGTAAGCAGGGTAGGAGGGGATTCTCTGGAGTTAATCCCCCAAATCCATCTGGGAAGTAGAACAACACAAGGCAAGCGTGGTCTGGCGGGCTTGCGTGGCTTTGTTCCTTTTCTGACTCTCACTGGAATGAAAGGGACTTGGAGCGTAACAATGCTGAGACGTTAAGAGGacagaaagtttttgtaaagATTCAGCTGGGCGGCATTCAAGAAGATAATCTCCATTCTGCAAGGTGAAGTGATCGGTGGCTCAGGGAAGAAGAACCCGCTGCTCTCGTTAGTGCCTCTGAGGTTTAGACAACAGCGCtggtttctttgtttgtttaccATTAGTCAGTGAAAGTAACATTTAAGAGTAGAGAAAGGCTCATGCCAGAAAGAATGAGTGAGAGTAATCCTAATGAGGAGGAGAGTGTGGATCAGGCTGGCAGCGGtgtagaggaagagggagacacGGCCACAAGGAAAGTCCCGGGTACAGGGGCCCGTCTGTGGGAGCGAGTCCGCAGCAGTCTGATCAAACCAAAGctgGATCCTCAGACATTGCAAAATAAAGACTGGCAGAGGACCGTCATCGCCATGAATGGGATCGAGGTGAAGCTTTCGATGAAGTTCACCAGCCGAGAGTTCAGTCTGAAGCGGATGCCTTCACGGAAACAGTCCGGCGTCTTTGGAGTGAAGATCAACGTAGTAACTAAGCGAGAACGCTCCAAGGTTCCCCTCATTGTGAGACAGTGCGTGGAGGAAATTGAGCGACGAGGGATGGACGAGGTGGGAATCTACAGAGTGTCTGGCGTCGCAACTGATATCCAGGCACTGAAGGCTGCCTTTGATTCAAACAACAGAGACGTGTCTGTCATGATGAGTGAGATGGACGTAAACGCCATCGCTGGAACACTGAAGCTGTATTTCCGCGAGCTGCCCGAGCCTCTTTTCACTGATGAGTTGTACCCCAACTTTGCTGGAGGCATCGCTCTCTCTGACAGTGTGGCCAAGGAGAGCTGCATGCTCAACCTGTTGCTGTCTCTACCAGAGCCCAATCTGGTCACCTTCGTCTTCCTGCTCGACCACCTTAAAAGGGTGGCTGAAAATGAGAGCATCAACAAGATGTCTCTGCACAATCTGGCCACCGTTTTTGGTCCCACTTTGCTGCGGCCCTCTGAAAAAGACAGCAAAATCTCAAACAGCTCGCAGCCAATCTCCATGAACGACAGCTGGTCTCTAGAGGTCATGTCTCAGGTGCAAGTCCTTCTCTACTTCCTTCAGCTGGAGAGCATTCCAACACCTGACAGCAAACGTCAAAGCCTTCTCTTCACTACCGAAGTATAGCAGGAACATCATGCACTTGTCTGTAATTGTTCTGTTCAGAGGCAGAATGTCTGCTGCCTAATGAGGTGGATGCTGCTGAGCAGCCATGACTCTGAGGATGCTTTATTTAGCCACTAGGTGGAACCATCAACGCATTGTAAACTGTAAACAGCCCCCATGCCCAAAGCCATTCCTTTTGGAGATGTGATGAGCACGTGTGTTCTGTGTATTTACAAGCTTGCCTGCTGTGTCAGTAAAAGACATACCATTATGATGtatagacatttttttaaatttaatttaaatatcaaGGAGCGTTATTTACTGTACTTTGATATTTTACACTGCCCTGTTCTGTCACTGTGCACATTAGCTCCATATTCACAGACAGGGGTTTCTGCTGTATTTGGATTTTGTAAGATGTATTTCTGTGAATGGATAATAGTTGAATGGTTGGATGAATGGACATATGTTTTTCATGGCTATACATGTTTGTTTCCCCCCCAGAAACGTTTGTCTTGGTTGAGAGCTCACCTGTGCCTATGTTTCCTTGCTGACGATGACCAATAGAACATTTCAGTTACCCTCATGTTTACACACACTCTTCATTTTGTACAGAATTTAAAAAGTATGAGACTGAAAACTGTAGTTTACACACAGCAACATGCAGGCATGTTGACCTAACCATTTGAAGTGTGTGCTATCTGTGCTATACAATTTGTATGGTTCTTCTGGTGGTGTCCGAGCCAACGTTCATGTAGATatgagtgctttttttttttggaagtggTACAGAGAAGTGAAAGGCAAATCATTCCAGGAAAAGGCGAGGCCTAATCCTTCCACCCATGGAATGTATACTGTGCTGTGTAGAATTTTAAATCACAGTTGTCTTTTGTCCATATTTCATATGTTTTGTgtccatattgttgttgttttttctgttgaTGTTATTGCTTCCGGCATTCCTTTTCTTTAGTCTACCTATATAGGACAAAACCACACTGCTGTAGAAATGAGAGCACCATCTCAAATACCAAATGTTGCCTAGTGGGGCCCTGGAAGCATAGTGATTCACCCATATCCAAGTCTCCTGGCTTATTCATACGTTTATCATCCACATAGCTAGTATTACTTACTGAAAATATACTGTTCTTtgcattaatattttttttctcccaaatCACTACAAGTATTCAAACACTTGTTAGCACAAACTATAACCCTACAGGCTTGTGATTTATGTAAAATAAGCAATAACTCTTAGTGATTCTTAGGATGAGACTAGTGGGGAGTGTATGTATgatttatgtaaataaaaaaattggtaACATTA

Function

symbol description
bcr Predicted to enable guanyl-nucleotide exchange factor activity and protein serine/threonine kinase activity. Predicted to act upstream of or within intracellular signal transduction; positive regulation of GTPase activity; and protein phosphorylation. Predicted to be located in axon and dendritic spine. Predicted to be active in membrane. Human ortholog(s) of this gene implicated in acute lymphoblastic leukemia; chronic myeloid leukemia; and leukemia. Orthologous to human BCR (BCR activator of RhoGEF and GTPase).

NR:

description
PREDICTED: breakpoint cluster region protein

GO: NA

KEGG:

id description
K08878 BCR1, BCR; breakpoint cluster region protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039803849.1 True 6110 mRNA 0.49 23 7766806 7820472
XM_039803851.1 False 2746 mRNA 0.45 8 7766806 7776826

Neighbor

gene id symbol gene type direction distance location
adora2aa adora2aa,LOC107667526,LOC107724898,LOC107600048 coding downstream 39746 7710144 ~ 7727060 (-)
LOC120560484 NA coding downstream 60310 7702359 ~ 7706496 (-)
upb1 upb1 coding downstream 93255 7663796 ~ 7673551 (-)
lrp13 NA coding downstream 216605 7528579 ~ 7550201 (-)
LOC120560563 NA coding downstream 240315 7523110 ~ 7526491 (-)
pptc7a pptc7,LOC102794815 coding upstream 94385 7914857 ~ 7924566 (-)
ppp1cc ppp1cc coding upstream 104461 7924933 ~ 7930884 (-)
myl2b myl2,LOC101478915,LOC103358995,LOC104927948 coding upstream 112499 7932971 ~ 7939104 (-)
LOC120561008 LOC103358998 coding upstream 268564 8089036 ~ 8161257 (-)
rab35b rab35,LOC103397428 coding upstream 393474 8213946 ~ 8235009 (-)
G59875 NA non-coding downstream 149671 7610429 ~ 7617135 (-)
G59878 NA non-coding downstream 190231 7576229 ~ 7576575 (-)
G59876 NA non-coding downstream 191276 7574720 ~ 7575530 (-)
G59855 NA non-coding downstream 272627 7493888 ~ 7494179 (-)
G59802 NA non-coding downstream 342442 7424163 ~ 7424364 (-)
G59951 NA non-coding upstream 6669 7827141 ~ 7877205 (-)
G59970 NA non-coding upstream 81759 7902231 ~ 7902539 (-)
G59972 NA non-coding upstream 83221 7903693 ~ 7903912 (-)
G60064 NA non-coding upstream 349913 8170385 ~ 8170606 (-)
G60072 NA non-coding upstream 380564 8201036 ~ 8201375 (-)
specc1la specc1l other downstream 794 7727560 ~ 7766012 (-)
G59881 NA other downstream 182287 7584086 ~ 7584519 (-)
G59739 LOC102786375,LOC102210956 other downstream 769950 6991203 ~ 6996856 (-)
G59563 NA other downstream 1243132 6522759 ~ 6523674 (-)
G59521 NA other downstream 1339995 6426206 ~ 6426811 (-)
anapc7 anapc7 other upstream 56927 7877399 ~ 7887425 (-)
G60145 NA other upstream 580550 8401022 ~ 8402566 (-)
tacr1a tacr1,LOC102799894,LOC100703444,LOC102196095 other upstream 822931 8643403 ~ 8727443 (-)
unc5db unc5d other upstream 2301680 10122152 ~ 10518967 (-)
G60715 NA other upstream 3368670 11189142 ~ 11189741 (-)

Expression


Co-expression Network