LOC120560946 (p2rx4,LOC102791813)


Basic Information

Item Value
gene id LOC120560946
gene name p2rx4,LOC102791813
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 7649773 ~ 7657652 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039803853.1
ATGAGCAAGCCTGCAGGCTTCTGTCAGCGCTGTCTGCATTACGCGTTTGACTATCAAACACCTAAAACACTGGTTATTACAGACATTGGGGTAGGATGTATCTTCAGGTTTGGCCAGCTTCTGGTGTTGCTGTATGTGGTGGGgtatgtgtgtgtggtgcggaAGGCCTACCAGGAGACAGACTCTGTCATAAGTAGCGTCACCACCAAAGTCAAAGGTTTTGCCTTCACCAACACATCTGACATGGACCCCCGGTTTTGGGATGTGGCTGATTATGTTATCCCATCCAAGGGTGATAACTCATTCTTTGTTTTAACCAATATGGTTGTTACCCCCAATCAGACTCAGTCACGTTGTCCTGAGCTTCCAAACCCATCAACTACTTGTGTGGATGATTGTGACTGCATCGAAGGACACAGTGATCCTCGAGGCAATGGTATACAGACAGGGCTGTGTGAGAACTATTCCACGACTGCCAAGACCTGTGAAGTGCTCTCATGGTGCCCTCTTGAAATAGACACTAAGTTGCCCGAACACGCACTGCTGGCTTCAGCAGAGAACTTCACTGTGTTGATCAAAAACAGCATAACATACCCGAAGTTCAACGTTCACAGAAGAAATATTCTGCCACATATTAACTCCTCATACCTGAAGAGGTGTGAATTCAATCGTGCAACAGACCCTGACTGCCCCATATTTCGCCTGAAAAACATCGTCTCAGAGGCTGGAGAGGAATTTCAAGACATGGCTGTAAAGGGTGGTGTCCTCGGTATTATTATTGACTGGAGCTGTGACCTGGACTGGTGGGCAGGGAAATGTTACCCCAAGTACAGCTTCCGCAGGCTGGACAGCAAACATCCGGTCAATAATGTGGCTCCTGGATACAACTTTAGgtTTGCAAAATACTACAAGACCCAAGATGGAGAGGAAACTAGAACCTTAATCAAAGCATACGGGATCCGGTTTGACGTCATTGTATTTGGAACTGCAGGGAAATTTGGAATTGTACCAACCATAGTGAACTTGGGTGCAGCATTATCAATCCTCAGATTGATTCCCGTTGTTACTGACTGGTTTATGCTGTCATGCACGCGTAAAAGAGATATTTACAGCAAACATAAAGTCACATCTCTGAAAGAGGATGGGGAAACTGAATCAGTGTCATTGGGAACGGGCACCAGCTACGGAACCCAGTAACAtgagccgctttccgaccggagggatttttgcagttcctagaacataacgtt
>XM_039803854.1
ATGAGCAAGCCTGCAGGCTTCTGTCAGCGCTGTCTGCATTACGCGTTTGACTATCAAACACCTAAAACACTGGTTATTACAGACATTGGGGTAGGATGTATCTTCAGGTTTGGCCAGCTTCTGGTGTTGCTGTATGTGGTGGGgtatgtgtgtgtggtgcggaAGGCCTACCAGGAGACAGACTCTGTCATAAGTAGCGTCACCACCAAAGTCAAAGGTTTTGCCTTCACCAACACATCTGACATGGACCCCCGGTTTTGGGATGTGGCTGATTATGTTATCCCATCCAAGCTTCCAAACCCATCAACTACTTGTGTGGATGATTGTGACTGCATCGAAGGACACAGTGATCCTCGAGGCAATGGTATACAGACAGGGCTGTGTGAGAACTATTCCACGACTGCCAAGACCTGTGAAGTGCTCTCATGGTGCCCTCTTGAAATAGACACTAAGTTGCCCGAACACGCACTGCTGGCTTCAGCAGAGAACTTCACTGTGTTGATCAAAAACAGCATAACATACCCGAAGTTCAACGTTCACAGAAGAAATATTCTGCCACATATTAACTCCTCATACCTGAAGAGGTGTGAATTCAATCGTGCAACAGACCCTGACTGCCCCATATTTCGCCTGAAAAACATCGTCTCAGAGGCTGGAGAGGAATTTCAAGACATGGCTGTAAAGGGTGGTGTCCTCGGTATTATTATTGACTGGAGCTGTGACCTGGACTGGTGGGCAGGGAAATGTTACCCCAAGTACAGCTTCCGCAGGCTGGACAGCAAACATCCGGTCAATAATGTGGCTCCTGGATACAACTTTAGgtTTGCAAAATACTACAAGACCCAAGATGGAGAGGAAACTAGAACCTTAATCAAAGCATACGGGATCCGGTTTGACGTCATTGTATTTGGAACTGCAGGGAAATTTGGAATTGTACCAACCATAGTGAACTTGGGTGCAGCATTATCAATCCTCAGATTGATTCCCGTTGTTACTGACTGGTTTATGCTGTCATGCACGCGTAAAAGAGATATTTACAGCAAACATAAAGTCACATCTCTGAAAGAGGATGGGGAAACTGAATCAGTGTCATTGGGAACGGGCACCAGCTACGGAACCCAGTAACAtgagccgctttccgaccggagggatttttgcagttcctagaacataacgtt

Function

symbol description
p2rx4 Enables several functions, including cadherin binding activity; identical protein binding activity; and ligand-gated cation channel activity. Involved in several processes, including cellular response to ATP; positive regulation of endothelial cell migration; and regulation of muscle system process. Located in cell junction; perinuclear region of cytoplasm; and plasma membrane. Is integral component of plasma membrane.

NR:

description
PREDICTED: P2X purinoceptor 4

GO:

id name namespace
GO:0034220 ion transmembrane transport biological_process
GO:0035590 purinergic nucleotide receptor signaling pathway biological_process
GO:0016021 integral component of membrane cellular_component
GO:0005524 ATP binding molecular_function
GO:0005216 ion channel activity molecular_function
GO:0001614 purinergic nucleotide receptor activity molecular_function

KEGG:

id description
K05218 P2RX4; P2X purinoceptor 4

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039803853.1 True 1250 mRNA 0.46 12 7649773 7657652
XM_039803854.1 False 1178 mRNA 0.47 11 7649773 7657652

Neighbor

gene id symbol gene type direction distance location
LOC120560421 p2rx4,LOC102791813 coding upstream 10364 7632692 ~ 7639409 (+)
si:ch211-12e13.1 NA coding upstream 52559 7576235 ~ 7597214 (+)
LOC120560565 LOC103361063,LOC101470473,LOC101159109,LOC100710325,LOC108235010,LOC107393511 coding upstream 76805 7550614 ~ 7572968 (+)
rchy1 rchy1 coding upstream 130001 7512039 ~ 7519772 (+)
bmp10 bmp10,LOC101468345 coding upstream 506753 7140197 ~ 7143020 (+)
gucd1 gucd1 coding downstream 520 7658172 ~ 7663129 (+)
LOC120561481 NA coding downstream 26993 7684645 ~ 7684763 (+)
LOC120561492 NA coding downstream 33022 7690674 ~ 7690792 (+)
LOC120561498 NA coding downstream 35439 7693091 ~ 7693209 (+)
LOC120561496 NA coding downstream 40275 7697927 ~ 7698045 (+)
G59839 NA non-coding upstream 2624 7646705 ~ 7647149 (+)
G59837 NA non-coding upstream 13719 7635595 ~ 7636054 (+)
G59826 NA non-coding upstream 18532 7630506 ~ 7631241 (+)
G59833 NA non-coding upstream 61143 7587795 ~ 7588630 (+)
G59804 tia1,LOC104967008 non-coding upstream 145759 7498489 ~ 7504014 (+)
G59931 pptc7,LOC106585473,LOC104951761 non-coding downstream 263125 7920777 ~ 7924556 (+)
G60082 NA non-coding downstream 569240 8226892 ~ 8227173 (+)
G60084 gcn1 non-coding downstream 574352 8232004 ~ 8238788 (+)
G60080 NA non-coding downstream 644606 8302258 ~ 8313113 (+)
G60109 NA non-coding downstream 667401 8325053 ~ 8326953 (+)
zbtb26 LOC104940087,LOC100710858,LOC102306976,LOC102206222,LOC101473380,LOC102792103 other upstream 19593 7625736 ~ 7630180 (+)
susd1 susd1 other upstream 26058 7600092 ~ 7623715 (+)
LOC120560567 ier3ip1,yee9,LOC103361062,LOC100710589,LOC107393509,LOC105014506,LOC103152384 other upstream 73637 7574725 ~ 7576136 (+)
zgc:65851 LOC103361079,LOC101467048,LOC102210174 other upstream 599001 7009646 ~ 7050772 (+)
add2 LOC102210956,LOC102786375 other upstream 652917 6969119 ~ 6996856 (+)
atp2a2a atp2a2,LOC102794349,LOC101476777,LOC102310403 other downstream 190019 7847671 ~ 7878371 (+)
cux2b cux2,LOC102795992 other downstream 289600 7947252 ~ 8051340 (+)
LOC120560006 NA other downstream 765537 8423189 ~ 8427745 (+)
LOC120560007 NA other downstream 773885 8431537 ~ 8434672 (+)
vps37ba vps37b,vps37c,LOC102776795 other downstream 1333789 8991441 ~ 9014903 (+)

Expression


Co-expression Network