ppiaa (LOC107103142,LOC106904245,LOC103470758,LOC106953379,LOC103129635)


Basic Information

Item Value
gene id ppiaa
gene name LOC107103142,LOC106904245,LOC103470758,LOC106953379,LOC103129635
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 15070267 ~ 15076395 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039803861.1
acctccatctttttcGGTTCCTTGTGGCCCACCGTGCACCCTCGCCGAAACCTCCGTACAGTCCACTCTCTCCAGTTCAGCCTGTTAAAATGGCAAAACCAAGAGTCTTCTTCGATATCACTGCTGACGGTACACCCATGGGCCGGGTGGTGATGGAGCTCCGTGACGACGTGGTGCCCAAAACTGCTGAAAACTTCCGTGCCCTCTGCACTGGTGAGAAGGGCTTCGGCTACAAGGGCTCCAGCTTCCATCGCATCATCCCAGAATTCATGTGCCAGGGCGGTGACTTCACTAACCACAATGGAACTGGTGGCAAGTCAATCTACGGCAACAAGTTTGCTGATGAGAACTTCACCCTGAAGCACCTTGACGCGGGCACCCTGTCCATGGCTAATGCTGGCCCAAACACCAACGGCTCCCAGTTCTTTATCTGCACAGCTAAAACGTCATGGCTTGATGGAAAGCACGTGGTGTTCGGGAAAGTGATTGAGGGGATGGGTGTGGTAAAGAAAATGGAGGCACAAGGCAGCCACAGCGGCAAAACCTCAAAGAAGATCGTCATTGCAGACTGTGGGCAGCTCTGAGCTCCAGCACGTAACCCTCTCTGCTTGCCACACCCCTGTAggccccagaccccccccccccccctgccatTCAACATTCCTATTGATGGAGATTCAACCGACCCCTTGCCGTCCCCTTTTTTATTCTGTTGAAATCATGTTGCTGCATTTGTGACTTTGCCTTTTTGAAGTTTCTTTTGCATTAACGTTTTTTTCCACAAAGTCCCAACGGTTTTTTTGTTAAgtcaaaaaaatgaataaaaaaaataaaactgaaagttG

Function

NR:

description
PREDICTED: peptidyl-prolyl cis-trans isomerase-like

GO:

id name namespace
GO:0000413 protein peptidyl-prolyl isomerization biological_process
GO:0006457 protein folding biological_process
GO:0003755 peptidyl-prolyl cis-trans isomerase activity molecular_function

KEGG:

id description
K09565 PPIF; peptidyl-prolyl isomerase F (cyclophilin D)

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039803861.1 True 845 mRNA 0.50 4 15070267 15076395

Neighbor

gene id symbol gene type direction distance location
LOC120560022 slc18a1,LOC100703472,LOC106527823 coding downstream 5426 15045882 ~ 15064841 (-)
LOC120560533 NA coding downstream 79122 14989147 ~ 14991145 (-)
tsc1a tsc1 coding downstream 445070 14600261 ~ 14625197 (-)
ak8 NA coding downstream 471125 14582084 ~ 14599142 (-)
ddx31 ddx31,LOC102778005 coding downstream 490104 14566031 ~ 14580163 (-)
LOC120560949 LOC103368073,LOC103397982 coding upstream 2490 15078885 ~ 15104108 (-)
ogdha LOC103368074,LOC101476977,LOC103397981 coding upstream 32621 15109016 ~ 15152609 (-)
adam9 adam9 coding upstream 81986 15158381 ~ 15199350 (-)
ercc6l LOC102777350 coding upstream 125744 15202139 ~ 15211704 (-)
LOC120560836 LOC103398011,LOC102234551,LOC103373450,LOC107386141,LOC101064581 coding upstream 232663 15309058 ~ 15317062 (-)
G61711 NA non-coding downstream 1374 15068542 ~ 15068893 (-)
G61706 NA non-coding downstream 42872 15026519 ~ 15027395 (-)
G61699 NA non-coding downstream 76487 14993477 ~ 14993780 (-)
LOC120560531 NA non-coding downstream 85082 14983467 ~ 14985185 (-)
G61695 NA non-coding downstream 104482 14965307 ~ 14965785 (-)
G61740 NA non-coding upstream 29870 15106265 ~ 15129963 (-)
G61742 NA non-coding upstream 76599 15152994 ~ 15180419 (-)
G61813 mak16 non-coding upstream 227334 15303729 ~ 15306067 (-)
G61837 ppp2cb,LOC102205414,LOC106587035,LOC100710281,LOC105025380 non-coding upstream 349156 15425551 ~ 15427495 (-)
G61894 LOC103373661,LOC101481450,LOC102205139 non-coding upstream 382438 15458833 ~ 15462921 (-)
tti2 tti2 other downstream 28887 15029876 ~ 15041380 (-)
LOC120559984 NA other downstream 52451 15013533 ~ 15017816 (-)
trnas-gcu_3 NA other downstream 101690 14968496 ~ 14968577 (-)
trnas-gcu_2 NA other downstream 102107 14968079 ~ 14968160 (-)
trnas-gcu_1 NA other downstream 102507 14967679 ~ 14967760 (-)
sdhaf1 sdhaf1,LOC102800057 other upstream 140155 15216550 ~ 15218422 (-)
LOC120560831 NA other upstream 148575 15224970 ~ 15232693 (-)
mfsd14bb LOC103398013,LOC102210719 other upstream 176220 15252615 ~ 15278184 (-)
LOC120560838 NA other upstream 292631 15369026 ~ 15402324 (-)
LOC120560105 LOC103362503 other upstream 1076025 16152420 ~ 16452488 (-)

Expression


Co-expression Network