LOC120560962


Basic Information

Item Value
gene id LOC120560962
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 18958006 ~ 18958978 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039803884.1
GTCGTAAAGGGAGGTGTGGATCAGCTGAGGCAGACTGTATATAAACAGTGGTAGCTGAAGCCTCTGACAGCTGATCCTGAGCATAGTTGTTGTTCTGTCACCGTCTGAAGACCTCAAGTTCTCCGGAGGAATTTGCTAAAGTAAAGATCACAAGGCCACTTTGATCATGGACATAACCATCTGCATGCTGAACGGGACTTCCCGCACCCTGAGGGTGCACCCTGAGGACACAGTGGGGTCTCTGAAAATTCTCATCCAGGACAAACTAGGATTTCCCTCTGCAACGCAGAGGCTGGTGTTTGTGAACGGCATGAACACCGATCTCAGCGACGACTCGAGGCCCCTGAGCTCCTACGGCTTACGATCTGGCGCCAGGGTGTCCCTGCTGGTGACCCAGCCGGCGACCGTCCAGGTGTTCCTCAGAAACGAGAAGGGGAAGTTGAGCACATATGACATCCAACGCGACGAGACTGTGAGCCACTTCAGGAGCAGGGTCGAGAGCAGAGAGGGGATTCCGGTGAGCCAGCAGAGGCTCATTCACCAAGGCAGAGAGATGAACGAGGGCAGACTTTCCGAATACAATGTTGAAGCGCTGAGCACCATCGACCTGGGTCTCCGTCTAAGAGGAGGCTGAGGACACTTTCATATAGTTCATATTCTGTACATTCCTTTATTTAATCTAAATCAAGATCTGACAGCCTCAAATGCCATATTTcgtatttatttgtattttcatttggAAAAAGCAATGCATTCCAAGAGTAATTCTGCCATATCTAAAAAATGATCATaacgttcacacacacacacaacacagtatgTTAGAATTGtattttgacatgttttaatatattaactggacactgtttaaaaaaaaaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039803884.1 True 880 mRNA 0.47 2 18958006 18958978

Neighbor

gene id symbol gene type direction distance location
sgsm1a sgsm1 coding upstream 5864 18924315 ~ 18952142 (+)
ankrd13a ankrd13a coding upstream 53233 18896623 ~ 18904773 (+)
LOC120560157 tchp,LOC102799482 coding upstream 79916 18872282 ~ 18878090 (+)
fam222a fam222a coding upstream 116804 18794250 ~ 18841202 (+)
aldh3b2 LOC103470338,LOC103357480,LOC106944551,LOC103142889,LOC106918406,LOC107097252,LOC101157544,LOC100709454,LOC102306236,LOC104945033,LOC105926931,LOC108234466 coding upstream 221531 18730216 ~ 18736475 (+)
LOC120560963 NA coding downstream 2859 18961837 ~ 18962808 (+)
alkbh2 alkbh2 coding downstream 11306 18970284 ~ 18973314 (+)
svopa svop coding downstream 26398 18985376 ~ 18992979 (+)
ssh1a ssh1 coding downstream 43318 19002296 ~ 19022881 (+)
LOC120560931 coro1c,LOC102291280,LOC106937262,LOC107393983,LOC107091240,LOC102218412 coding downstream 70429 19029407 ~ 19074342 (+)
G62755 NA non-coding upstream 93199 18864575 ~ 18864807 (+)
G62741 NA non-coding upstream 184898 18772755 ~ 18773108 (+)
G62732 NA non-coding upstream 209510 18747490 ~ 18748496 (+)
G62667 NA non-coding upstream 320785 18636726 ~ 18637221 (+)
G62656 lztr1 non-coding upstream 340437 18617074 ~ 18617569 (+)
G62796 NA non-coding downstream 7105 18966083 ~ 18982623 (+)
G62836 NA non-coding downstream 125956 19084934 ~ 19086862 (+)
LOC120560789 NA non-coding downstream 192555 19151533 ~ 19153584 (+)
G63005 LOC104920315,LOC103374896,LOC100704901 non-coding downstream 590432 19549410 ~ 19554906 (+)
G63007 NA non-coding downstream 596405 19555383 ~ 19562350 (+)
mvk mvk,LOC102798305 other upstream 215607 18737518 ~ 18742399 (+)
acacb acacb other upstream 272543 18661157 ~ 18685463 (+)
tpcn1 tpcn1 other upstream 483275 18441347 ~ 18474731 (+)
tbx5b tbx5,LOC103470367 other upstream 538416 18407348 ~ 18419590 (+)
G62513 NA other upstream 626776 18330705 ~ 18331230 (+)
tmem119a LOC103353570,LOC104946818 other downstream 117583 19076561 ~ 19081654 (+)
rasl10a rasl10a other downstream 471423 19430401 ~ 19448950 (+)
c6h2orf68 c21h2orf68,c9h2orf68,LOC104941594,LOC103363183,LOC104920309 other downstream 800618 19759596 ~ 19763524 (+)
vps13a vps13a other downstream 1441969 20400947 ~ 20442093 (+)
wdr31 wdr31,LOC102796061 other downstream 1514673 20473651 ~ 20490586 (+)

Expression


Co-expression Network