zbtb34 (zbtb34,LOC100694860,LOC102780544,LOC102300203)


Basic Information

Item Value
gene id zbtb34
gene name zbtb34,LOC100694860,LOC102780544,LOC102300203
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 870031 ~ 877817 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039803888.1
CCACGTTATCTTTTACAAACTATTTGAAGAACGACTGTAGGCTActtcacatttatttttgcGCGTGTCCACGTCGTATATTAAGAACATGATGTCTTAGTACATAACACTGACATGAGCAAGGGAGGGGCAGCTGCTGCAAAACACACTGATAGAATGAATGCAAAGAGCCAAAAGAACACTTCCTGTTGATGCAAAAATTGCAGCAGCAACTGTCTGACACATCTGGACTGGAGAGGGGGGGAGGCCTGGCTGTAGTGTTAGCGAACTACTGAGTGGAATGGACAACGTTTAATGCTAATCTGCAAGACGGCAGCCGACAAACTGGAGAAACATATCCAAGAAATGGACGACGGCAGCTACATCGAGTTTGATGTGCCGGAGTTCAGTAACACTGTTCTGACCCAGCTCAATGAGCTGCGGCTGCAAGGGAAGCTGTGTGACATAATAGTTCACATTCAGGGCCAGCCATTTCGAGCCCACAAGGCCGTGCTGGCAGCTAGTTCACCCTACTTTCGTGACCACTCAGCTCTCAGCACCATGAGTGGCCTTTCCATCTCGGTCATCAAAAGCCCCGAGGTGTTTGAGCAGCTTCTTGCGTTCTGCTACACGGGTCACATGTCCCTGCAGCTCAAGGATATTATCAGTTTCCTCACTGCTGCCAGCTTTCTGCAGATGCAGGCCATCATTGACAAGTGTACCCAAATCCTGGAGAGCATCCACTCCAAGATCAGCCTCCCAGTTAGTGTTTGCAGCCCAGAGAAGGACGACTCGCAGACCGGCGGCAACGGGGTCAATGACAGCAACCTCTTTGTAAACCCTACCCAGATCTCCCCCCCTTACTACTCCCGGCAGAGTCAGGCAGGACACGACGCGCGCTTTGAGCTGTCAGGGAAAGGCCTAGGCCGGGGGCGACAGCAGCAAGAGGAAGGCCAGTCGGACCGAGGCAGTAGTGACAGTGTGTCGGAGCTTGACGCTCCCATGGATGGAGAAACGGAGCAAGTGGAACTGATCGGCAAAGATGGGCAAGTAACCGATGTGCACGTGAAGatagagaagacagacaggccCACGTACTCCGACAGCTCCTCAGCTGGTGACGACGGCTACCACACGGAGTTGGTGGATGGAGAACAGGTATTGGCTGTTAGCGTGGGCTCCTATGGTCCTGTCATCCAGTCTGCTGCCTATTCGTACTCAGGGCTGTCCTCGCCATGCTTTGTCAACCTTACCAACTCCAGTCCTTCCCGCTCCATGCTCAGTGGCTACAGAGGTGGGCGAGCCAGGGCAAAGCGACCCTTGGCCATCCCAGCGGCAGTGCTGAGTCATATCAAACCAGGCTTGGATGACGGCGAATCAGCAGTGGGACCCGCGGGGCTGGAGAACGACGTGCGCGAGCGCAGCCTGCGGAGCCAGTGGTACCCCTACAACGAGAGACTCATTTGCATCTACTGTGGAAAGACCTTCAATCAGAAAGGGAGCCTGGATCGCCACATGCGCCTGCACATGGGAATCACCCCATTTGTTTGTAAATTCTGTGGCAAGAAGTACACAAGGAAAGACCAGCTGGAGTACCACATCCGTGGCCACACGGACAACAAGCCCTTCCACTGTCAGATCTGTGGCAAGTGCTTCCCGTTTCAGGGCACCCTTAACCAGCACCTGAGGAAGAAGCACATGGGAGCATCAGAGGGCAGTAATCACATAGACTCTCCAGAGACGACGGAGGGGAACTCAGGTCAGAAGGACCAAGAGGATACGTCCGAGGGGATGGCCTTTGAGGCACAATATGCAGAAGAGGCACCAGCCAATGATATGGAGGAGAGTTCAAAATGCAGTCCAGAGGAGGCCCAAGCATCAAGATGTGATTTGTAGGTCCTGCTTCAGGTTAAAGAAGCTTTAAGAAATGTTTATCTTAACTCAACTTAtaggacttttttttccttttctttttgaatCAGCTCCCTCTACTATAGACATTTCCTGCGTCAAGGGATTCTGTCAATTTTGTGAAAGTTAGATGTTGAATGCGGAGAGCAAATGGGTGCTTTATAGAAATTTGATTATTTCAAGCAAAGGGAGTAACAACTTACTATTTTTCAGGAGGTCCCAGTAATCAAGACCCCCTCATTGATTTCTCTTTATAtctttccatgttttttaaaacatatttacagaGTTATATAGGCATGTTGCAATAATTGATAATGTGAAAGCTCTGGTAagat

Function

symbol description
zbtb34 Predicted to enable DNA-binding transcription repressor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be active in nucleoplasm. Orthologous to human ZBTB34 (zinc finger and BTB domain containing 34).

NR:

description
PREDICTED: zinc finger and BTB domain-containing protein 34

GO:

id name namespace
GO:0005634 nucleus cellular_component
GO:0046872 metal ion binding molecular_function
GO:0003676 nucleic acid binding molecular_function

KEGG:

id description
K10508 ZBTB34; zinc finger and BTB domain-containing protein 34

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039803888.1 True 2228 mRNA 0.50 2 870031 877817

Neighbor

gene id symbol gene type direction distance location
mvb12bb LOC104950954 coding upstream 96818 732697 ~ 773213 (+)
pbx3b pbx3 coding upstream 276226 532813 ~ 593805 (+)
gapvd1 gapvd1,LOC102777314 coding upstream 437402 381172 ~ 432629 (+)
unm_hu7912 LOC102295462,LOC101483439,LOC103375604,LOC100694328 coding upstream 493116 367381 ~ 376915 (+)
syn1 syn1,LOC102209911 coding upstream 513678 340977 ~ 356353 (+)
adamts13 adamts13 coding downstream 151440 1029257 ~ 1052283 (+)
LOC120560446 LOC104936599 coding downstream 228147 1105964 ~ 1127084 (+)
si:dkeyp-14d3.1 tmem132c coding downstream 279653 1157470 ~ 1329623 (+)
glt1d1 glt1d1 coding downstream 493967 1371784 ~ 1396195 (+)
fzd10 fzd10 coding downstream 599271 1477088 ~ 1480626 (+)
G57999 NA non-coding upstream 266851 166018 ~ 603180 (+)
G58057 NA non-coding upstream 297499 541890 ~ 572532 (+)
G58024 dtx1,LOC106585516,LOC106579922 non-coding upstream 610334 257568 ~ 259697 (+)
G58021 dtx1 non-coding upstream 617959 245891 ~ 252072 (+)
G58011 NA non-coding upstream 659355 209281 ~ 210676 (+)
G58151 NA non-coding downstream 1437 879254 ~ 882251 (+)
G58156 NA non-coding downstream 14280 892097 ~ 892439 (+)
G58157 NA non-coding downstream 21076 898893 ~ 899506 (+)
G58209 crat,LOC107393635,LOC102215149,LOC101477431 non-coding downstream 175198 1053015 ~ 1053413 (+)
G58215 ier5l,LOC103375736 non-coding downstream 183212 1061029 ~ 1062510 (+)
lmx1bb lmx1b,LOC102213269,LOC100696266 other upstream 32170 789405 ~ 837861 (+)
LOC120560799 NA other upstream 657648 210742 ~ 212383 (+)
dock5 dock5 other downstream 1395861 2273678 ~ 2312665 (+)
lman2lb NA other downstream 2000557 2878374 ~ 2883861 (+)
LOC120560521 tjp2 other downstream 2557348 3435165 ~ 3522756 (+)
G59086 NA other downstream 3239462 4117279 ~ 4117631 (+)
G59172 sub1 other downstream 3546324 4424141 ~ 4429981 (+)

Expression


Co-expression Network