zcchc8 (zcchc8)


Basic Information

Item Value
gene id zcchc8
gene name zcchc8
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 20076882 ~ 20082990 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039803889.1
ATAGTTGCTTTCGTTAGTAGCTGGGTAAAAATGGCTGAAGTTGATTTCGGCGATTGTGAGCTCTTTCAGCTGCTTGATGATTCCGCACCGGTCCCGACGCATATTCGCTTCACAGATGATgaggaggacaaggaggagACGAGCCAGGTCCGGAGCAGACTGGAGGAGTATGATGACTACATTCAGAGACTCACCGAGGAGAATAAAGGTTTAAGAAGAAAACTGAAAATCCTGACACGACCAAGCGGCATCACAATAGAAGATGTCAACATCGACGGGCCAGCTCTTCAAATCCTTTATGCAAACAATATTATTTCAAAGCAGTGTCGTCAAGAAATTGAAGATTGCATCTGCAATGTGATTTTGAAGCACCAGAAACCGagcaatgaaaagaaaaactccaTCTTGCAAATGAAACCTCAGAATTCAGCTTTTGCTTTGGATGAAGATCTGCATAAGTCCTCTTCCAGTAGCGTAAAAACAACAACCGAAGCGTTTAAAGTGGTTGGAAGTGTCTTATATTTCACTACATTTAGTGTTGATAAACTTGGACAGCCTCTGGTGAATGAAAACCCCCAGCTGACAGATGGATGGGACGTTCCAACATATCACCAGGTTTTTAACCAAGTCGTTGGCACAGATGGACAGGATATAgaaatgaaagacaaaagACCCAAATCAATGTGTTTCAACTGTGGTTTGAGTGGTCATCAGCTGAGAGACTGTCCCAAGCCTAAAGACATGGCTGCAATTAatgagagaaggaaggagtttAATCAGAACAACAACCAGGCCATGCAGAGTAACCAGCGATACCATGCTGATGAAGTGGAGGAGCGGTTTGCTAAATACAAGCCTGGAGTCATGAGTGAGGATCTGTTGACAGCGCTGGGAATTGATGGAAACACCCTCCCACCTCTAATTTATCGCATGAGGCAGTTAGGCTATCCACCAGGTTGGCTCAAAGAGGCAGAGATGGAAAACTCTGGCTTAACAATGTATGATGGAAATGtTTCAAATGATGGTAAAATAACAGACGATACCAATTCGCAAAACATCTCTTATGATGTTTCCAAACTGGTAGATTTCCCAGGCTTCAATGTAACTGCATCACACAACGTGAAAGATGAGTTCATGCAGTATGGTTCTATTCCAATGCAGACCAACCACATGAAGCAAAACTATGCAGCTTATCTGTCCAACAACTTCCCTATGCCTGGTGCCACCTGCAACAAGAGACGGCATGAATCTGAATCATCTCCACAGCAAAGGAAGAAGACGAGGTCCAGTCCGGATCGAAACTCTGATAGAAGCTCGGACATGGATATTGAATCAGACCCAGGAACACCTTATAATCATGGCCTGGGTGACTTCCAGTTCCAACCTCCGATGCCCCCTGGCTCCCCATGCTTTAGTTCACCGCCTCCTTTACCCCAGGGCACTCCTCCTGCTACACCCACTCCCCCACCTCTCCCTAAAGGTACTCCTCCTCCCACACCCACCAACGGCTCTCCAGCTCTGCGGGGGAGTAACTGGGTAGTAGTTGATGAAACTGTGGACGGAACAGAGGATGAATTGTCATTGGAGGAACTGGAGGAGCAGCAGAGGCTGATTTGGGCAGCTCTAGAAAATGCTGACACTGCCACGAATAGCGAATCTGAGACACCTGCAGTGGGAACACCTGTACCCAGTTCAGACACAGAAACGGAGGAGGTTGAAGAAAcgatggacaaaacaagacctgCAGAAACTTGCCATAGCAGTGAAAATAAAAGTGAACCAGGGGTTCAAGAGATTTGCTCTCAGAGCCCTGGTCTAATCAAAGCCCCAGACGACAGCCCCCAGAGCCCTGGTCCGGTCAAAGCCCCAGACGACAGCCCCCAGAGCCCTGGTCCGGTCAAAGCCCCAGACGACAGCCCCCAGAGCCCTGGTCCGGTCAAAGCCCCAGACGACAGCCCCCAGAGCCCTTGTCCGGTCAAAACCCGAGACGACAGCCCCCAGAGCCCTGGTCCAATCAAACGTCAGGAAGGTAACCCCCAGAGCCCTGATCTAGATTTCTCTAATGGAGCAGCTGGAGATTGTGCTTCTCCTACGCATGACGAGAAGATAACCGCTGTTCCTCATCGTAGCAGGTTTGCAGCTGGCATCGTTCCGTTTGAAGATACACCAGAGTACACTGAAGTTGCTGAAGCCACAGGGACATACCTTAGGATCAGAGACTTGCTTAAAAGTTCCCCTCGAagtttagcaaaaaaaaaataactgtacGGTCTTCATTTGGAACACAAGGGTacattgatattttttaaacaaacttcTATTTTCATGACCATCCTATCAGGCATGTTTTagctgtttattttttgtaccaAATTGAATGTCTATGCTGTGTATATACATTTGATCTGTAAACAAGGAGGGACATCAAGGGATGTTGCAACAACAGTAGTTTTTAAGTTTTGACCAATACGTCTAAGTTTTTTGTAACAGTTATGTTACTCATgctgtttattttattgtaaaatttgtGAAATGGTCATTTTTTGACCTGTAAAAAATTTTAATACCATGATGTTAAAATGaccttttctatttttgttcTACTTAAATTGCTTAAAACCCTTAAGTAAACATGCTTTCACTTGCttcagtgcttttattttgtctggCAGCCATGGATAGATGTTGGTTTGATTTCATTTTGCTGTATGTTGTACACAGATGGTGTAGTTGATTGTTTAACCATCTTTAGCAGAGTTTAGTGAATAAATTGGTCAATTTGTTCACTAAACTCTGCTAAAGATGCTACCTTCTTTCTAAAATCAGCTCCTTGCTGATGTAATGCACATTGGCAATCAAATTGCATGTAATTGGAACTACACTACAACAATGTGTATTTTTGTCCCTGGGACATTATAAACCTTGGTCTACATTTTGTCTATATCACAGCTGAAATAAAGTTAATTGTCCCATTTCACGCTCATCTGCAagcaaaaaaacatcaaactgCTTTAAAGAAGCTATAGAGGCTAGATATGCACTGAAGTGTCAATCATGGTTAGGCATTTAATAAAATGGTTACCTGTTGTGTGTTA
>XM_039803890.1
ATAGTTGCTTTCGTTAGTAGCTGGGTAAAAATGGCTGAAGTTGATTTCGGCGATTGTGAGCTCTTTCAGCTGCTTGATGATTCCGCACCGGTCCCGACGCATATTCGCTTCACAGATGATgaggaggacaaggaggagACGAGCCAGGTCCGGAGCAGACTGGAGGAGTATGATGACTACATTCAGAGACTCACCGAGGAGAATAAAGGTTTAAGAAGAAAACTGAAAATCCTGACACGACCAAGCGGCATCACAATAGAAGATGTCAACATCGACGGGCCAGCTCTTCAAATCCTTTATGCAAACAATATTATTTCAAAGCAGTGTCGTCAAGAAATTGAAGATTGCATCTGCAATGTGATTTTGAAGCACCAGAAACCGagcaatgaaaagaaaaactccaTCTTGCAAATGAAACCTCAGAATTCAGCTTTTGCTTTGGATGAAGATCTGCATAAGTCCTCTTCCAGTAGCGTAAAAACAACAACCGAAGCGTTTAAAGTGGTTGGAAGTGTCTTATATTTCACTACATTTAGTGTTGATAAACTTGGACAGCCTCTGGTGAATGAAAACCCCCAGCTGACAGATGGATGGGACGTTCCAACATATCACCAGGTTTTTAACCAAGTCGTTGGCACAGATGGACAGGATATAgaaatgaaagacaaaagACCCAAATCAATGTGTTTCAACTGTGGTTTGAGTGGTCATCAGCTGAGAGACTGTCCCAAGCCTAAAGACATGGCTGCAATTAatgagagaaggaaggagtttAATCAGAACAACAACCAGGCCATGCAGAGTAACCAGCGATACCATGCTGATGAAGTGGAGGAGCGGTTTGCTAAATACAAGCCTGGAGTCATGAGTGAGGATCTGTTGACAGCGCTGGGAATTGATGGAAACACCCTCCCACCTCTAATTTATCGCATGAGGCAGTTAGGCTATCCACCAGGTTGGCTCAAAGAGGCAGAGATGGAAAACTCTGGCTTAACAATGTATGATGGAAATGtTTCAAATGATGGTAAAATAACAGACGATACCAATTCGCAAAACATCTCTTATGATGTTTCCAAACTGGTAGATTTCCCAGGCTTCAATGTAACTGCATCACACAACGTGAAAGATGAGTTCATGCAGTATGGTTCTATTCCAATGCAGACCAACCACATGAAGCAAAACTATGCAGCTTATCTGTCCAACAACTTCCCTATGCCTGGTGCCACCTGCAACAAGAGACGGCATGAATCTGAATCATCTCCACAGCAAAGGAAGAAGACGAGGTCCAGTCCGGATCGAAACTCTGATAGAAGCTCGGACATGGATATTGAATCAGACCCAGGAACACCTTATAATCATGGCCTGGGTGACTTCCAGTTCCAACCTCCGATGCCCCCTGGCTCCCCATGCTTTAGTTCACCGCCTCCTTTACCCCAGGGCACTCCTCCTGCTACACCCACTCCCCCACCTCTCCCTAAAGGTACTCCTCCTCCCACACCCACCAACGGCTCTCCAGCTCTGCGGGGGAGTAACTGGGTAGTAGTTGATGAAACTGTGGACGGAACAGAGGATGAATTGTCATTGGAGGAACTGGAGGAGCAGCAGAGGCTGATTTGGGCAGCTCTAGAAAATGCTGACACTGCCACGAATAGCGAATCTGAGACACCTGCAGTGGGAACACCTGTACCCAGTTCAGACACAGAAACGGAGGAGGTTGAAGAAAcgatggacaaaacaagacctgCAGAAACTTGCCATAGCAGTGAAAATAAAAGTGAACCAGGGGTTCAAGAGATTTGCTCTCAGAGCCCTGGTCCGGTCAAAGCCCCAGACGACAGCCCCCAGAGCCCTGGTCCGGTCAAAGCCCCAGACGACAGCCCCCAGAGCCCTGGTCCGGTCAAAGCCCCAGACGACAGCCCCCAGAGCCCTTGTCCGGTCAAAACCCGAGACGACAGCCCCCAGAGCCCTGGTCCAATCAAACGTCAGGAAGGTAACCCCCAGAGCCCTGATCTAGATTTCTCTAATGGAGCAGCTGGAGATTGTGCTTCTCCTACGCATGACGAGAAGATAACCGCTGTTCCTCATCGTAGCAGGTTTGCAGCTGGCATCGTTCCGTTTGAAGATACACCAGAGTACACTGAAGTTGCTGAAGCCACAGGGACATACCTTAGGATCAGAGACTTGCTTAAAAGTTCCCCTCGAagtttagcaaaaaaaaaataactgtacGGTCTTCATTTGGAACACAAGGGTacattgatattttttaaacaaacttcTATTTTCATGACCATCCTATCAGGCATGTTTTagctgtttattttttgtaccaAATTGAATGTCTATGCTGTGTATATACATTTGATCTGTAAACAAGGAGGGACATCAAGGGATGTTGCAACAACAGTAGTTTTTAAGTTTTGACCAATACGTCTAAGTTTTTTGTAACAGTTATGTTACTCATgctgtttattttattgtaaaatttgtGAAATGGTCATTTTTTGACCTGTAAAAAATTTTAATACCATGATGTTAAAATGaccttttctatttttgttcTACTTAAATTGCTTAAAACCCTTAAGTAAACATGCTTTCACTTGCttcagtgcttttattttgtctggCAGCCATGGATAGATGTTGGTTTGATTTCATTTTGCTGTATGTTGTACACAGATGGTGTAGTTGATTGTTTAACCATCTTTAGCAGAGTTTAGTGAATAAATTGGTCAATTTGTTCACTAAACTCTGCTAAAGATGCTACCTTCTTTCTAAAATCAGCTCCTTGCTGATGTAATGCACATTGGCAATCAAATTGCATGTAATTGGAACTACACTACAACAATGTGTATTTTTGTCCCTGGGACATTATAAACCTTGGTCTACATTTTGTCTATATCACAGCTGAAATAAAGTTAATTGTCCCATTTCACGCTCATCTGCAagcaaaaaaacatcaaactgCTTTAAAGAAGCTATAGAGGCTAGATATGCACTGAAGTGTCAATCATGGTTAGGCATTTAATAAAATGGTTACCTGTTGTGTGTTA

Function

symbol description
zcchc8 Predicted to enable RNA binding activity. Predicted to be involved in ncRNA processing. Predicted to be part of catalytic step 2 spliceosome. Orthologous to human ZCCHC8 (zinc finger CCHC-type containing 8).

NR:

description
PREDICTED: zinc finger CCHC domain-containing protein 8

GO: NA

KEGG:

id description
K13128 ZCCHC8; zinc finger CCHC domain-containing protein 8

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039803889.1 True 3095 mRNA 0.44 14 20076882 20082990
XM_039803890.1 False 3056 mRNA 0.44 15 20076882 20082990

Neighbor

gene id symbol gene type direction distance location
rsrc2 rsrc2 coding upstream 2618 20067457 ~ 20074264 (+)
LOC120560988 kntc1 coding upstream 42785 20031875 ~ 20034097 (+)
LOC120560984 NA coding upstream 72987 20001950 ~ 20003895 (+)
LOC120560983 NA coding upstream 91914 19983835 ~ 19984968 (+)
kmt5ab LOC102787754 coding upstream 128413 19943828 ~ 19948469 (+)
clip1a clip1,LOC102789884 coding downstream 923 20083913 ~ 20109984 (+)
LOC120561472 LOC104952314,LOC103366651 coding downstream 79007 20161997 ~ 20168159 (+)
psmd9 psmd9 coding downstream 85730 20168720 ~ 20172092 (+)
LOC120561473 NA coding downstream 98194 20181184 ~ 20191466 (+)
LOC120561477 NA coding downstream 108929 20191919 ~ 20220630 (+)
G63204 NA non-coding upstream 49716 20026910 ~ 20027166 (+)
G63203 NA non-coding upstream 50127 20025755 ~ 20026755 (+)
G63202 NA non-coding upstream 51134 20024913 ~ 20025748 (+)
G63192 NA non-coding upstream 58470 20018117 ~ 20018412 (+)
G63190 NA non-coding upstream 60221 20016232 ~ 20016661 (+)
G63385 NA non-coding downstream 309417 20392407 ~ 20392631 (+)
G63377 NA non-coding downstream 359164 20442154 ~ 20442952 (+)
LOC120560275 NA non-coding downstream 475350 20558340 ~ 20564445 (+)
G63451 NA non-coding downstream 482678 20565668 ~ 20566142 (+)
G63457 NA non-coding downstream 552599 20635589 ~ 20637358 (+)
c6h2orf68 c21h2orf68,c9h2orf68,LOC104941594,LOC103363183,LOC104920309 other upstream 313358 19759596 ~ 19763524 (+)
rasl10a rasl10a other upstream 627932 19430401 ~ 19448950 (+)
tmem119a LOC103353570,LOC104946818 other upstream 995228 19076561 ~ 19081654 (+)
mvk mvk,LOC102798305 other upstream 1334483 18737518 ~ 18742399 (+)
acacb acacb other upstream 1391419 18661157 ~ 18685463 (+)
vps13a vps13a other downstream 317957 20400947 ~ 20442093 (+)
wdr31 wdr31,LOC102796061 other downstream 390661 20473651 ~ 20490586 (+)
G63480 rbm19 other downstream 593427 20676417 ~ 20677916 (+)
LOC120560787 NA other downstream 1505886 21588876 ~ 21599289 (+)
G63905 NA other downstream 2846909 22929899 ~ 22930205 (+)

Expression


Co-expression Network