kmt5ab (LOC102787754)


Basic Information

Item Value
gene id kmt5ab
gene name LOC102787754
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 19943828 ~ 19948469 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039803908.1
TCACGCACTATTTCGCAGTGTAGCTAGCAGTCTGATGTTTGTCGTTACAGAAGCAGTGAATTAGCTAAGCACAGTGAGGACACAGAAGGCTAAATTTAATAAACTCCTCATCCACTGAATGTTATTCTGGGAACGGACATGGCAAAAGGGAAGGAAAGTGTGCTAAGAACCGATAAAAAGCCCGAGGACACTGTTCAACATAAAGTCAACTCACGGAAGGAGACAAAGGAAAACAAACCTACAACTAACAAGGATTGCGTAGGCACAGTGCAGTCATTTTTCCAGAGTCTACGGAGTCCAAGCAAACCTAGATCCCCTCTGAGCGACAATTCAAGCATGCTGATCCAGGAAGGAAATGAATCTGATGCAACTAATCCTGACACgccaaagtttaaaaaagACCTGCCTAATGAAATAAAATCTGAGAGTTGTGAGTCTAAAGAGCAGAAGCCTGAAATGGCTTGTCACAGTCATGTGATCAGAGAACAAGGCCCTGACCAAATTGAGAAAAAAGAGTCCACCACGCACACAAATGGCAGGTCTGCAGCAGACCTCAAACTTTCAGCATCCAAACCTCAAAGTAGAACTGGTCGAAAACTCGGAGCAAAAAAGACAGAGGACAAAACTTCCCAAAACAGAAAGGTGACGGACTATTATCCCATCAGACGGAGTAACAGAAAAACTAAAGCAGAGTTAAAGagtgaagaacacagacacattgATGACCTGATAAAGAATGACATTGAAGAAGGACTGCAGATCAAACACATAGAAGGAAAAGGAAGAGGGATATTTGCTGTCAAGCGCTTCAAAAAGGGAGAGTTTGTCGTGGAGTACCATGGAGATCTACTGGAACTAGCTGAGGCTAAAATAAAAGAGGCCCAGTATGCTCTGGATCCTAAAAAAGGCTGTTACATGTACTACTTCCAGTATCAATCCAAAACGTACTGTGTGGACGCTACAGAGGAAACAAGCCGGCTTGGAAGACTGATCAACCACAGTAAAACTGGAAACTGCCAAACTAGGCTTCACCCCATCAGCGGTACCCCTCATCTGATTCTGGTGGCTTCCAGAGACATTGAAGCAGAGGAAGAGCTGCTGTATGACTACGGTGATCGGAGTAAAGCCTCAGTCTTGGCTCACCCTTGGCTCAAATACTAAATCCTCCACCACAAATGTTCATATTTTAGATGAATTGGTGCTGGTCCTATTCAGCGTTATGTAAAAGATGCTATAGATGAGTAGTCCTCAACATGCTTTTATatgaagtataaaaaaaaaatacttttgttttaaattggGGCTAATGCGTCAACTCATGAGTGTATTTTTCCAACTGTTTTTATCATGATTTTTTATatagagattttttttattttttattatctaaTTGTAGCAGACTGATGCAAGCTTGAAGGGCATTTCTCCTCATGGGGTTTCCTTTTGCAATGAATATAATTGACAATTCAATTTCCCTATTGTAAATTATTAACTGTGCTGTAAATTAAGGAATAAAACACTTGAGTTTTCA
>XM_039803909.1
TCTCACGCACTATTTCGCAGTGTAGCTAGCAGTCTGATGTTTGTCGTTACAGAAGCAGTGAATTAGCTAAGCACAGTGAGGACACAGAAGGCTAAATTTAATAAACTCCTCATCCACTGAATGTTATTCTGGGAACGGACATGGCAAAAGGGAAGGAAAGTGTGCTAAGAACCGATAAAAAGCCCGAGGACACTGTTCAACATAAAGTCAACTCACGGAAGGAGACAAAGGAAAACAAACCTACAACTAACAAGGATTGCGTAGGCACAGTGCAGTCATTTTTCCAGAGTCTACGGAGTCCAAGCAAACCTAGATCCCCTCTGAGCGACAATTCAAGCATGCTGATCCAGGAAGGAAATGAATCTGATGCAACTAATCCTGACACgccaaagtttaaaaaagACCTGCCTAATGAAATAAAATCTGAGAGTTGTGAGTCTAAAGAGCAGAAGCCTGAAATGGCTTGTCACAGTCATGTGATCAGAGAACAAGGCCCTGACCAAATTGAGAAAAAAGAGTCCACCACGCACACAAATGGCAGGTCTGCAGCAGACCTCAAACTTTCAGCATCCAAACCTCAAAGTAGAACTGGTCGAAAACTCGGAGCAAAAAAGACAGAGGACAAAACTTCCCAAAACAGAAAGGTGACGGACTATTATCCCATCAGACGGAGTAACAGAAAAACTAAAGCAGAGTTAAAGATCAAACACATAGAAGGAAAAGGAAGAGGGATATTTGCTGTCAAGCGCTTCAAAAAGGGAGAGTTTGTCGTGGAGTACCATGGAGATCTACTGGAACTAGCTGAGGCTAAAATAAAAGAGGCCCAGTATGCTCTGGATCCTAAAAAAGGCTGTTACATGTACTACTTCCAGTATCAATCCAAAACGTACTGTGTGGACGCTACAGAGGAAACAAGCCGGCTTGGAAGACTGATCAACCACAGTAAAACTGGAAACTGCCAAACTAGGCTTCACCCCATCAGCGGTACCCCTCATCTGATTCTGGTGGCTTCCAGAGACATTGAAGCAGAGGAAGAGCTGCTGTATGACTACGGTGATCGGAGTAAAGCCTCAGTCTTGGCTCACCCTTGGCTCAAATACTAAATCCTCCACCACAAATGTTCATATTTTAGATGAATTGGTGCTGGTCCTATTCAGCGTTATGTAAAAGATGCTATAGATGAGTAGTCCTCAACATGCTTTTATatgaagtataaaaaaaaaatacttttgttttaaattggGGCTAATGCGTCAACTCATGAGTGTATTTTTCCAACTGTTTTTATCATGATTTTTTATatagagattttttttattttttattatctaaTTGTAGCAGACTGATGCAAGCTTGAAGGGCATTTCTCCTCATGGGGTTTCCTTTTGCAATGAATATAATTGACAATTCAATTTCCCTATTGTAAATTATTAACTGTGCTGTAAATTAAGGAATAAAACACTTGAGTTTTCA

Function

NR:

description
N-lysine methyltransferase KMT5A-like isoform X1

GO: NA

KEGG:

id description
K11428 SETD8; [histone H4]-lysine20 N-methyltransferase SETD8

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039803908.1 True 1531 mRNA 0.41 8 19943830 19948469
XM_039803909.1 False 1473 mRNA 0.41 7 19943828 19948469

Neighbor

gene id symbol gene type direction distance location
mtrfr clg12h12orf65,LOC102787453,LOC102198566,LOC102302482,LOC104962307 coding upstream 979 19941473 ~ 19942849 (+)
arl6ip4 arl6ip4,LOC102787162 coding upstream 52169 19889250 ~ 19891659 (+)
mthfd2 mthfd2,LOC103363193 coding upstream 56358 19883210 ~ 19887470 (+)
selenom selenom,LOC100701119,LOC101070319,LOC101478641 coding upstream 137286 19800122 ~ 19806542 (+)
sftpbb sftpb coding upstream 189851 19749201 ~ 19753977 (+)
LOC120560983 NA coding downstream 35366 19983835 ~ 19984968 (+)
LOC120560984 NA coding downstream 53481 20001950 ~ 20003895 (+)
LOC120560988 kntc1 coding downstream 83406 20031875 ~ 20034097 (+)
rsrc2 rsrc2 coding downstream 118988 20067457 ~ 20074264 (+)
zcchc8 zcchc8 coding downstream 128413 20076882 ~ 20082990 (+)
G63128 NA non-coding upstream 68684 19873101 ~ 19875144 (+)
G63087 NA non-coding upstream 111501 19780965 ~ 19832327 (+)
G63076 LOC103376870 non-coding upstream 196359 19746949 ~ 19747469 (+)
G63068 LOC103148513,LOC106959092,LOC106925485,LOC102232144 non-coding upstream 226353 19716498 ~ 19717475 (+)
G63029 NA non-coding upstream 287332 19656232 ~ 19656496 (+)
G63189 NA non-coding downstream 66535 20015004 ~ 20015249 (+)
G63190 NA non-coding downstream 67763 20016232 ~ 20016661 (+)
G63192 NA non-coding downstream 69648 20018117 ~ 20018412 (+)
G63202 NA non-coding downstream 76444 20024913 ~ 20025748 (+)
G63203 NA non-coding downstream 77286 20025755 ~ 20026755 (+)
c6h2orf68 c21h2orf68,c9h2orf68,LOC104941594,LOC103363183,LOC104920309 other upstream 180304 19759596 ~ 19763524 (+)
rasl10a rasl10a other upstream 494878 19430401 ~ 19448950 (+)
tmem119a LOC103353570,LOC104946818 other upstream 862174 19076561 ~ 19081654 (+)
mvk mvk,LOC102798305 other upstream 1201429 18737518 ~ 18742399 (+)
acacb acacb other upstream 1258365 18661157 ~ 18685463 (+)
vps13a vps13a other downstream 452478 20400947 ~ 20442093 (+)
wdr31 wdr31,LOC102796061 other downstream 525182 20473651 ~ 20490586 (+)
G63480 rbm19 other downstream 727948 20676417 ~ 20677916 (+)
LOC120560787 NA other downstream 1640407 21588876 ~ 21599289 (+)
G63905 NA other downstream 2981430 22929899 ~ 22930205 (+)

Expression


Co-expression Network