c6h5orf51 (clg12h5orf51,LOC104920657,LOC104943311,LOC103366194,LOC101465834)


Basic Information

Item Value
gene id c6h5orf51
gene name clg12h5orf51,LOC104920657,LOC104943311,LOC103366194,LOC101465834
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 24105990 ~ 24110189 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039803945.1
cacatgaatgcagcatcaTCCCTAGCTCACGTGACGCATACTTTAGTCATGGCCGACGACTACAGGCGACAAGGTTTTGAGTTGGAGAGAAGGATATTTGAGTTAGATATCAAGTGTTCCAGTCTCAGAGCTGAAAAGCAAGATGATGACTATTTACAGAATGCGTCTGCCATACTAGACAAGTTGAAAAGCTATTACAGGCAAGGAGGGGAGAGTAGCAACCTTTCCAAGGTGCTTCAGGATTACACACAGGTGATCCTAGACATCACATTTTATGAAGAGAATAAACTGGTGGACCAGGAGTTCCCTGAGGACTGTTCACCATTTAAAATCCAGCAGCTCCTGCAAGACCTGACCGAACCAGAAGTTTTGGCAGGGAGGCTAGCACCAGCACAagaaGTGCAGTCTGTTTTGGGCCTAGAGCTGTTGGAATGCCTCTATTGGAGACGTGGAGCTCTGCTGTACATGTACTGCCACACCCTTCATCAACGAAAACAGTGGATTAAGAAAAACAAGGACACATTCCTTAAGTGTATTCAGGAAGGGGTGCGCTACCTAATGCGGATGCTGCAGGTGAGAAACTCTGTGAAGCTCAACGATGGGGTAGTGCTTCATGACACTGCTACAGCAAGCTTCCTATCTGAAGGCATCTTCTCAGACACACACCTGTTGACAATGATGTACATCGGGGAAATGTGTTTCTGGGCAGTCAAGTATGAGGACTGCAGCGCTGACACTATGGATCGCAAAGAAGATCGCCTCCAGTTTCGGGACATTGGCACACAGATCCTCAACAAATATGTGCTTGCATGTGAGGGCCCTCTGCAGGGCCAGGGCTGGAACACAGAGAATGCCAAGGAAATCCTTAGTATTTTACAGTGAACCAAGCTGCTCCTGTGTTGAAGATGCCTTCGGCACAGATCTAAGTTCAGTATTCAAATGTGTGTCAACCCCAAATAAAAATGGAATCCATCAGGTGGGGTGTAATGTTGTGGAAGGTTTAGGGGGAGCATGGGAAGAAAATGTTTGAAGAAAAGATTCTTTGGATCAGTGTCTACAGGCAATCTCATCCCATGCCAAACGGCCCAGGCCAAAGCAGGTGAAAGAGAGGTTAGAAAGGATAAGGTAGGTGGTGTAAAACTGGCAGGGgctgcagagttgaatatttttTTGCCCTGTCCTGCTGAAAAAGCAGTTATCATCTTGATTCCAGACTGTTGCCCAGGGCACTTATTTTGCCCTGAGAATGTGttataataacattaatatgaatataaaaAGGGTATTAATAAAATTGAcctttttactttcattttttttaagattaaaaGTTTGAAGATAATCCAGCTGGAAATGAGACATTGCAcagtaacattttatttattgttttgttgccattttGTTATgcttttaatatattataattgcatatacattatatatgtatgtgtgtataaaaaTGTGCACACTTGAGGCAAAGAAAAGGTGTTCAAAAACTGTTTGACAATGATGTATTAATGACTATTTGAAGTATGTTCAGATTTGTTCATACCAGCTTTGTAATGCGCCACTTGTATCCCCATCTATTGCAAGTTCCATTTTCTGCCACTTCAATAATCTTGATAGTATAACTATTAGAGAACCTGTGTTGTTTGGACGAAaatcattttctgttttttatgtcCTCGTTGACAATAAACACGCGcgttgttttaagaaaaa

Function

NR:

description
PREDICTED: UPF0600 protein C5orf51 homolog

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039803945.1 True 1722 mRNA 0.42 6 24105990 24110189

Neighbor

gene id symbol gene type direction distance location
rgs7bpa rgs7bp coding upstream 92506 24004082 ~ 24013484 (+)
si:dkey-250l23.4 rnf180,LOC104964874 coding upstream 105185 23992653 ~ 24000805 (+)
ipo11 ipo11,LOC102795548 coding upstream 199534 23754325 ~ 23906456 (+)
ercc6l2 ercc6l2,LOC105014104 coding upstream 383461 23704402 ~ 23722529 (+)
dock8 dock8 coding upstream 618484 23408216 ~ 23487506 (+)
fbxo4 fbxo4,LOC102798721 coding downstream 131 24110320 ~ 24117183 (+)
ghra LOC103366197 coding downstream 16674 24126863 ~ 24162470 (+)
znf131 znf131,LOC102798529 coding downstream 64252 24174441 ~ 24181811 (+)
nim1ka nim1k coding downstream 71728 24181917 ~ 24202984 (+)
creb3l3l LOC103366202,LOC104958765 coding downstream 93333 24203522 ~ 24210442 (+)
G64188 NA non-coding upstream 1638 24101506 ~ 24104352 (+)
G64183 NA non-coding upstream 47229 24049968 ~ 24058761 (+)
G64172 NA non-coding upstream 88922 24015078 ~ 24017068 (+)
G64130 NA non-coding upstream 356155 23744939 ~ 23749835 (+)
G64127 NA non-coding upstream 370697 23734824 ~ 23735293 (+)
G64200 NA non-coding downstream 54488 24164677 ~ 24169528 (+)
G64235 NA non-coding downstream 124085 24234274 ~ 24234488 (+)
G64251 NA non-coding downstream 252286 24362475 ~ 24362909 (+)
LOC120560123 NA non-coding downstream 404630 24514819 ~ 24518873 (+)
G64279 NA non-coding downstream 750060 24860249 ~ 24862730 (+)
G64108 NA other upstream 412699 23692662 ~ 23693291 (+)
LOC120560905 clg12h9orf3,LOC103358904,LOC102294417,LOC101470200,LOC102214270 other upstream 543705 23487967 ~ 23562285 (+)
G63905 NA other upstream 1175785 22929899 ~ 22930205 (+)
LOC120560787 NA other upstream 2506701 21588876 ~ 21599289 (+)
G63480 rbm19 other upstream 3428074 20676417 ~ 20677916 (+)
prxl2c aaed1 other downstream 711125 24821314 ~ 24823066 (+)
cdc14b cdc14b,LOC102776968,LOC103141798,LOC106948523 other downstream 713529 24823718 ~ 24837448 (+)
LOC120561182 LOC104948667,LOC104930137,LOC103397628,LOC103366370,LOC107092578,LOC102226292,LOC106956829,LOC106919698,LOC103470079,LOC103141747 other downstream 1574775 25684964 ~ 25696576 (+)
LOC120560031 LOC104941040,LOC103357154,LOC102795853 other downstream 1804090 25914279 ~ 25915577 (+)
LOC120560359 NA other downstream 1815898 25926087 ~ 25928596 (+)

Expression


Co-expression Network