LOC120561006


Basic Information

Item Value
gene id LOC120561006
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 7220841 ~ 7223583 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039803946.1
tgtcaaCTACTGCTAAACTAATCCAAAGATGTGAAATGTAAGTGAAGCAGTCCTGGTCAGGTTCATATTATAttgaatgtaactaatattGATTTACATGTAACATTTCCATATTATAGCCTGAAGTCACCAaacaaacattgtatttttatgCCTATTACAGCCTGTTTCTATCTATCTTTGTAGTTTCCGTGGTTCCCAGTGAGGACTCTACTCCTTTTGAGTCAGCTGAGGAGGTTCTCACAGTGACCCAATCAGACTCCTCTCAACAAGAGTGAGATGCAGGAAACTGCAGGACATTCTGCAGAGCTCAGAAGATATTCCAGATGCAAGCGGGCATCCTTCCACCTCCACATCATGGTGCTTGCGCCAATCTGCAGCCCAAGATGAGTAGCGGAAAGCGAGGTCTCATCATCTGAGCTGCTTGCTGTCCTGCAACGTGGTTCCAGAGAAGAACTGCAGCCACTGCACATCTCCTGCCATCATTCGATGCAGAGACTGCATGCCAGAGGAGTGGCTGTGTACGGAGTGTGGCATACACAtccataaaaaacacacactccatAACAGGGAGTCCTGCATTGGGGGAATTTACAAGCCCATAGAGCCAACAGTGTGCTGCGTAAAGCAAGATGGCGGATATACACTGGTCAATCAAGTATGTCTTTTGCCtacagtgaggcctgtgcagtTGTGCACGTGTGATCCTGCAACCATAACAGAATCAGCTGGTAGAGCAATAATTATGGTTTGCATAAATGgtCGGTATGATTGGCACTTGTCAAACTTGTCTTGCAAATTATGTCTGGCACAGTGGACACCTGACATGAGCGACCTCATACGCACTGGGTATTGGCCAGCATCTGTGAATGCTGACACATTGTTTTCAGTGGATGTCTTTACTTCATTTGAAGAGTTGAAAACTGTGGCTCCCAGTTTGTCGCGTCAGGGTTTTTTGCGGATGTTGGAGAAGAGGACCTGTCAATTTGGAAGGGCTGGCAAAATCCATGGAGACGTATTCCAAAGGAGTTATTTGGAGTACACATTCTGCCAGTACCATTGGGAGAATATGGCCAGTGTAGAGCACTTCACCTGCCCGGCATGTACACCCAACAAGATAGCTCTTTGTGCAGATGGCAACAGAAAGCAGTACCGATTTCGACAGTCAAAAGGGtCAGAGCAACCATATTTTGACGGTACTTTCATCGCCAAGGACGCTGAAGTACAGCATTTTGTTGAGGAGATCGGGAGTAAAAAGTGTTagttaaatatttatatattgtttttgcaATGTATGGCTTAAAACTTGAAATGTAGGATTTTCCATTACAAATTAGTTATTTCTTCCCTCAAGACCAGATGGTGTCAGCTTAAATGGAACAGACTAGTATCTCCCAACCAGCAATTTGAGCAATATGTTGCATCTCATCCAAGTAATTTTGGGTTTGAAATTGGGTGACATCCAAAGTGGCTAGATTTCGGTAGGTATTGACCAGATAACATGAGACCATGTGATCAGGTTTACTGGTCATATTCATATAAAACCAATGTCCTGTTTGACCAA
>XM_039803947.1
tgtcaaCTACTGCTAAACTAATCCAAAGATGTGAAATGTAAGTGAAGCAGTCCTGGTCAGGTTCATATTATAttgaatgtaactaatattGATTTACATGTAACATTTCCATATTATAGCCTGAAGTCACCAaacaaacattgtatttttatgCCTATTACAGCCTGTTTCTATCTATCTTTGTAGTTTCCGTGGTTCCCAGTGAGGACTCTACTCCTTTTGAGTCAGCTGAGGAGGTTCTCACAGTGACCCAATCAGACTCCTCTCAACAAGAGTGAGATGCAGGAAACTGCAGGACATTCTGCAGAGCTCAGAAGATATTCCAGATGCAAGCGGGCATCCTTCCACCTCCACATCATGGTGCTTGCGCCAATCTGCAGCCCAAGATGAGTAGCGGAAAGCGAGGTCTCATCATCTGAGCTGCTTGCTGTCCTGCAACGTGGTTCCAGAGAAGAACTGCAGCCACTGCACATCTCCTGCCATCATTCGATGCAGAGACTGCATGCCAGAGGAGTGGCTGTGTACGGAGTGTGGCATACACAtccataaaaaacacacactccatAACAGGGAGTCCTGCATTGGGGGAATTTACAAGCCCATAGAGCCAACAGTGTGCTGCGTAAAGCAAGATGGCGGATATACACTGGTCAATCAAGTATGTCTTTTGCCtacagtgaggcctgtgcagtTGTGCACGTGTGATCCTGCAACCATAACAGAATCAGCTGGTAGAGCAATAATTATGGTTTGCATAAATGgtCGGTATGATTGGCACTTGTCAAACTTGTCTTGCAAATTATGTCTGGCACAGTGGACACCTGACATGAGCGACCTCATACGCACTGGGTATTGGCCAGCATCTGTGAATGCTGACACATTGTTTTCAGTGGATGTCTTTACTTCATTTGAAGAGTTGAAAACTGTGGCTCCCAGTTTGTCGCGTCAGGGTTTTTTGCGGATGTTGGAGAAGAGGACCTGTCAATTTGGAAGGGCTGGCAAAATCCATGGAGACGTATTCCAAAGGAGTTATTTGGAGTACACATTCTGCCAGTACCATTGGGAGAATATGGCCAGTGTAGAGCACTTCACCTGCCCGGCATGTACACCCAACAAGATAGCTCTTTGTGCAGATGGCAACAGAAAGCAGTACCGATTTCGACAGTCAAAAGGacTTGTGAAAAGGCGGAGGCTGAGTCTCAGAGACTGGAAGATTTCTACCTTCGCCTGATCTGCTCCACGATGTGCCTGGGGAGTTACAACGACATCATGGGCCGGGCCTCCGTCAAGGCAGGAAGGCTAGGAAACGGGGTAGGAGAGGCAGCCTTAGACGGCGCATCCGAGGAGCTACCAAGCTACCGCTACCACCGATGCTTCTCTGCAACCCACGATccttaaaaaacaaactggATGAACTGCGTCAACAGGTTGGAGCCTGCCAAGAATATCGTGAGTCTGGTCTAATGGCTTTTACAGAAACCTGGTTTAGTGACGAGGTGCCAGACAACTTTATTCAAATCGAAGGTTTCTCCCACCTACGTTTAGACACGGCAAGACACGGGGGGGTGGGGTGTGTATGTACATTAAAGATAGCTGGTGCCGTAACATTGCAGTGAGAGACAAAATGTAACCCAGACCTGGAGCTGCTGTGTGTTATCCTGCGGCCACATTATCTGCCAAGAGAATTTACcaacatatttgtgtgtgttgtgtatattcCACCAAGTGGGAATGCCAGCAGAGCAGCTAAGGCAATCACAGACTGTGTCCATCGCCATTTGAATTTGTACAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039803946.1 False 1564 mRNA 0.44 6 7221541 7223583
XM_039803947.1 True 1793 mRNA 0.47 6 7220841 7223583

Neighbor

gene id symbol gene type direction distance location
erlin2 LOC100709255,LOC101468631,LOC102303107,LOC102789125,LOC102208735 coding downstream 8830 7182813 ~ 7212011 (-)
ch25hl3 NA coding downstream 51141 7161301 ~ 7169700 (-)
hk2 LOC103369118,LOC106531304 coding downstream 279105 6895202 ~ 6941736 (-)
tbx1 tbx1 coding downstream 1158979 6048963 ~ 6061862 (-)
tango2 tango2 coding downstream 1553632 5643204 ~ 5667209 (-)
znf703 znf703,LOC103397455 coding upstream 58833 7282416 ~ 7285425 (-)
LOC120560561 tia1 coding upstream 272928 7496511 ~ 7510835 (-)
trnag-ccc NA coding upstream 287638 7511221 ~ 7511291 (-)
LOC120560563 NA coding upstream 299527 7523110 ~ 7526491 (-)
lrp13 NA coding upstream 304996 7528579 ~ 7550201 (-)
G59756 NA non-coding downstream 72035 7101573 ~ 7148806 (-)
G59743 NA non-coding downstream 137628 7025606 ~ 7083213 (-)
G59734 NA non-coding downstream 191428 6976605 ~ 7029413 (-)
LOC120560930 NA non-coding upstream 141849 7365432 ~ 7366200 (-)
LOC120560966 NA non-coding upstream 142674 7366257 ~ 7367921 (-)
G59802 NA non-coding upstream 200580 7424163 ~ 7424364 (-)
G59855 NA non-coding upstream 270305 7493888 ~ 7494179 (-)
G59876 NA non-coding upstream 351137 7574720 ~ 7575530 (-)
G59739 LOC102786375,LOC102210956 other downstream 223985 6991203 ~ 6996856 (-)
G59563 NA other downstream 697167 6522759 ~ 6523674 (-)
G59521 NA other downstream 794030 6426206 ~ 6426811 (-)
LOC120561494 NA other downstream 1629031 5589573 ~ 5591810 (-)
LOC120561493 NA other downstream 1754404 5466223 ~ 5466437 (-)
G59881 NA other upstream 360503 7584086 ~ 7584519 (-)
specc1la specc1l other upstream 503977 7727560 ~ 7766012 (-)
anapc7 anapc7 other upstream 653816 7877399 ~ 7887425 (-)
G60145 NA other upstream 1177439 8401022 ~ 8402566 (-)
tacr1a tacr1,LOC102799894,LOC100703444,LOC102196095 other upstream 1419820 8643403 ~ 8727443 (-)

Expression


Co-expression Network