XLOC_005155


Basic Information

Item Value
gene id XLOC_005155
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007123.7
NCBI id CM002896.2
chromosome length 49182954
location 7017519 ~ 7044694 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00011092
ATTTGCAGAACATTGAAACAAAATGCAAAATCATAAGTTTGCCACTAATTAAAAGTGTAATATTCCagtaatactaataaaactacaaGTTACAAGACGTATGTTATTAATTACGTCATGATAATTTTGTTGGGCTGACGTAAGTGCTCGGTGTCGACTCGAATGAATCATGCGTTGCTAAAGGACGTTTGTTTGTaatataactgtttatttatgctttgtagTTGTAAACTTTGGCTGTCCTAATGATTGTATTTTAAAGGGACATCGAATGACGCCAAAATGGAGACGTTACAGtcgatattttatttataatttgttgttttgtttacgaCAAGTACTTTCTTAGTTACTGACGAATGTGCTCGGTGTTGAGTCGAATGAATCAAACAGTGCTGACTGGACATGTTTGTCTTTAGTAAATATAATTGTTGATTAAGGCTTTATTCTTTTGAACTTTGGCCATCTGTATGATTGTACCTTAAGAGGACATCAAATGACGCCAAATAGAGGTGTTACagtcaatattttttatatagattttgTTATTTTATCAGAAGTAGGCCTACAAAGTTCCACAGTTTGTGACTGTGCCTGATAAAGCAGCACGTATACAGGAGAAAAGGGAATGATAAAGCTAAAAGTGTTGTCTGGCTCAGGATTCACCACAGGAGGACCTCACACACCCTTCATCTCAGTGCTTCGAGAAGAGAAGGGTCATCTGAAAAGGATATGAAATTGTCGTCAAATTGTCCAGCCCTTGCACATGCAGTAAAGTATGTACTGTCTTCTC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00011092 True 793 lncRNA 0.36 3 7017519 7044694

Neighbor

gene id symbol gene type direction distance location
XLOC_005154 pcdh15b coding downstream 112144 6566233 ~ 6905375 (-)
XLOC_005153 si:ch211-253p2.2 coding downstream 465838 6542789 ~ 6551681 (-)
XLOC_005151 NA coding downstream 524427 6306823 ~ 6493092 (-)
XLOC_005152 NA coding downstream 653939 6348703 ~ 6363580 (-)
XLOC_005150 a1cf coding downstream 839625 6160446 ~ 6177894 (-)
XLOC_005156 NA coding upstream 25945 7070639 ~ 7083373 (-)
XLOC_005157 NA coding upstream 97773 7142467 ~ 7142830 (-)
XLOC_005158 si:dkey-187i8.2 coding upstream 104754 7149448 ~ 7157527 (-)
XLOC_005159 ipmkb coding upstream 149085 7193779 ~ 7235103 (-)
XLOC_005160 ube2d1b coding upstream 192972 7237666 ~ 7253270 (-)
XLOC_005148 NA non-coding downstream 861560 6151831 ~ 6155959 (-)
XLOC_005147 NA non-coding downstream 867833 6142282 ~ 6149686 (-)
XLOC_005143 NA non-coding downstream 1044950 5756203 ~ 5972569 (-)
XLOC_005162 NA non-coding upstream 258871 7303565 ~ 7322951 (-)
XLOC_005163 NA non-coding upstream 361394 7406088 ~ 7441307 (-)
XLOC_005164 FP102277.1 non-coding upstream 458268 7502962 ~ 7503098 (-)

Expression


Co-expression Network