asgrl1


Basic Information

Item Value
gene id asgrl1
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 14454088 ~ 14456312 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039803997.1
ACTTTGTGTGATCTCATGGTCAGAGTCCAACCAGAGAGATTCAGAGAGCTTCTGATTCTTGATGACGTAATGGAGGCTCAGTATCACCGGTTTGCATCGTCTGATAACAGCTCTGTCCAGGAAGAGCACAAAACGACTGCCCAAACGGTGTCTGCAGGTCTGAGGAGGATAGTGGTGTATGTCCTGTAtggagtgctgctgctgctgctgttaattCTGCTGATGGTCACTGGGATAAGATTCTCCCAGTTAAACAAGGGAATCACTGACGTCAAACTGAGCCTTGAGAGGATCAGCAATGGAAGGACAACTTCATCGTCCAGTTCAGGTCAGGAAATGGTTTCAGGTGCAACAACTATGCAGGAGGTCGTCTTACAGAAACTTGTCCCAGTTCAAGGAACATGCAGGGAAGGATGGGTGTCTTTCCAGAGGAGCTGCTACCTGCTATCCAGGACCGCCGTGACCTGGAGCAAAGCAGAGGAGCGGTGCCAAACACACGGAGCACACCTGGTGGTTCTGAACAACGCGGAGGAACTGGACTACATTTCAAAAGTAGTTGAAATCAGATATAACTATTGGATTGGACTTGTGGAGCGAGAACACGAGGGACACTGGAGCTGGGTGGATGGAACGGACTTCAATTCCACCCCAACTTTCTGGGATAAGGGTCAGCCTGACAACTGGGACTACAGAGAGAACGGAGAGGACTGTGGGCAGATTCACAGTTCTGCGATACGCAAACGCAAGCTGTGGAATGATGCAGACTGCAACCTGGCGTATCCATACATCTGTGAAACCAAGGCGTGATGTGAGAGACAGTGAACCTGTCCGAGCCACTGAACCCTCACCAACATGACAGGCCTGATATGTTGGAAAATAATGGCTCAAATTAAGACAGAAGGAAATGATGTTTTTGATATCAATGTATTAATTTTGAGAGTCACAAAAAGGGATAAAAGTTGCATATACAGTACGTGTGCGTGGCATTTGTTGGAGACAACAAAACACTAACTATGAATACAATGACACTTGTTGATTTTGAATAAAGACACACTCTTCTGCGTGTT
>XM_039803998.1
ACTTTGTGTGATCTCATGGTCAGAGTCCAACCAGAGAGATTCAGAGAGCTTCTGATTCTTGATGACGTAATGGAGGCTCAGTATCACCGGTTTGCATCGTCTGATAACAGCTCTGTCCAGGAAGAGCACAAAACGACTGCCCAAACGGGTCTGAGGAGGATAGTGGTGTATGTCCTGTAtggagtgctgctgctgctgctgttaattCTGCTGATGGTCACTGGGATAAGATTCTCCCAGTTAAACAAGGGAATCACTGACGTCAAACTGAGCCTTGAGAGGATCAGCAATGGAAGGACAACTTCATCGTCCAGTTCAGGTCAGGAAATGGTTTCAGGTGCAACAACTATGCAGGAGGTCGTCTTACAGAAACTTGTCCCAGTTCAAGGAACATGCAGGGAAGGATGGGTGTCTTTCCAGAGGAGCTGCTACCTGCTATCCAGGACCGCCGTGACCTGGAGCAAAGCAGAGGAGCGGTGCCAAACACACGGAGCACACCTGGTGGTTCTGAACAACGCGGAGGAACTGGACTACATTTCAAAAGTAGTTGAAATCAGATATAACTATTGGATTGGACTTGTGGAGCGAGAACACGAGGGACACTGGAGCTGGGTGGATGGAACGGACTTCAATTCCACCCCAACTTTCTGGGATAAGGGTCAGCCTGACAACTGGGACTACAGAGAGAACGGAGAGGACTGTGGGCAGATTCACAGTTCTGCGATACGCAAACGCAAGCTGTGGAATGATGCAGACTGCAACCTGGCGTATCCATACATCTGTGAAACCAAGGCGTGATGTGAGAGACAGTGAACCTGTCCGAGCCACTGAACCCTCACCAACATGACAGGCCTGATATGTTGGAAAATAATGGCTCAAATTAAGACAGAAGGAAATGATGTTTTTGATATCAATGTATTAATTTTGAGAGTCACAAAAAGGGATAAAAGTTGCATATACAGTACGTGTGCGTGGCATTTGTTGGAGACAACAAAACACTAACTATGAATACAATGACACTTGTTGATTTTGAATAAAGACACACTCTTCTGCGTGTT

Function

NR:

description
CD209 antigen-like protein C isoform X1

GO:

id name namespace
GO:0030246 carbohydrate binding molecular_function

KEGG:

id description
K10059 CLEC4E, MINCLE; C-type lectin domain family 4 member E

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039803997.1 True 1067 mRNA 0.47 7 14454088 14456312
XM_039803998.1 False 1058 mRNA 0.47 7 14454088 14456312

Neighbor

gene id symbol gene type direction distance location
LOC120561207 NA coding downstream 6073 14445463 ~ 14448015 (-)
hnf1a hnf1a coding downstream 54121 14392607 ~ 14399967 (-)
pop5 pop5 coding downstream 77231 14374656 ~ 14376857 (-)
rnf10 rnf10,LOC102784202 coding downstream 79855 14365222 ~ 14374233 (-)
LOC120561371 crybb3,LOC103469711,LOC102784487 coding downstream 126576 14324930 ~ 14327512 (-)
LOC120559985 nacc2,LOC102304562,LOC102778489,LOC103397964,LOC101483941 coding upstream 59487 14515799 ~ 14532759 (-)
qsox2 qsox2,LOC102781541 coding upstream 78956 14535268 ~ 14547863 (-)
ddx31 ddx31,LOC102778005 coding upstream 109719 14566031 ~ 14580163 (-)
ak8 NA coding upstream 125772 14582084 ~ 14599142 (-)
tsc1a tsc1 coding upstream 143949 14600261 ~ 14625197 (-)
G61566 NA non-coding downstream 30277 14417175 ~ 14423811 (-)
G61564 msi1,LOC102299939,LOC108239862,LOC107687968,LOC107550984,LOC107712472 non-coding downstream 35183 14411397 ~ 14418905 (-)
G61559 NA non-coding downstream 66349 14387523 ~ 14387739 (-)
G61425 NA non-coding downstream 140156 14313595 ~ 14313932 (-)
G61423 NA non-coding downstream 168201 14284175 ~ 14285887 (-)
LOC120561033 NA non-coding upstream 4614 14460926 ~ 14466354 (-)
G61586 NA non-coding upstream 28930 14485242 ~ 14485537 (-)
LOC120560922 NA non-coding upstream 97891 14554203 ~ 14556499 (-)
LOC120560921 NA non-coding upstream 102774 14559086 ~ 14559729 (-)
G61601 NA non-coding upstream 173299 14629611 ~ 14630973 (-)
si:ch73-138n13.1 LOC102794857,LOC107084631 other downstream 89762 14328151 ~ 14364326 (-)
G61264 NA other downstream 864756 13589039 ~ 13589332 (-)
LOC120561038 LOC102778062,LOC101486272,LOC102199534,LOC108245630 other downstream 1898803 12293707 ~ 12555285 (-)
LOC120561001 whrn,LOC102797690 other downstream 2392442 11901650 ~ 12061646 (-)
abca2 abca2 other downstream 2860428 11285385 ~ 11593660 (-)
trnaa-agc_14 NA other upstream 482663 14938975 ~ 14939047 (-)
trnaa-agc_15 NA other upstream 488184 14944496 ~ 14944568 (-)
trnae-cuc_15 NA other upstream 492447 14948759 ~ 14948830 (-)
trnas-gcu NA other upstream 495190 14951502 ~ 14951583 (-)
trnas-gcu_1 NA other upstream 511367 14967679 ~ 14967760 (-)

Expression


Co-expression Network