svopa (svop)


Basic Information

Item Value
gene id svopa
gene name svop
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 18985376 ~ 18992979 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039804001.1
TAGTGTTAATAAGTAATGTGGAGGACCCCAGTAATCAGCATTCATGTATAGTGTCAGGTCCTCCTGAGCTCATCCTGtcctctctccctgtgtctcGTGCTGTGACTCTCGCAGCGCGGCTTCTCATTGGCTGCCGGCGGACACTCGGAGCAGGTAGCTCTCCTCGGTGCTGAAATCGCTGCTCGTCGTGATAATGTAAACGGCGATGAGGCCAAACGGAGCGTCAGACAGTAAACACCAAAATGGACGATGATCAGTTCCAACTGAGACAGCTGCCTGTTGTCCGATTCCGTCGCACAGGTGAGAGCATACACTCTGAGGATGATGGCGAGAATAGAGAACAGGATATCAGGATTGCAGAGCAGATTGATCTGGAGTCCGTGGCCCTTGCAGACGGAGCTCCCGTTCCCCGGGAGTTTGCCAATCCAACTGATGATACATTCATGGTAGAAGATGCTGTTGAGGCCATCGGCTTTGGGACATTTCAGTGGAAACTCTCCATCCTCACTGGTCTGTCCTGGATGGCTGATGCTATGGAGATGATGATTCTCAGCATCTTAGCCCCACAGCTCCACTGTGAGTGGAGGCTGCCCACCCTCGAGGTGGCACTGCTTACATCGGCAGTGTTTATTGGGATGATGATCAGCTCTTCTCTTTGGGGAAACATATCTGACAGATACGGCAGAAAGACAGGTCTCAAGATGAGTGTGCTGTGGACTATGTTCTATGGCGTGATGAGTGCATTTGCACCTATTTATGGGTGGATCCTCGTCCTCCGTGCACTGGTGGGCTTTGGCATCGGAGGAGCCCCACAGTCGGTGACACTGTATGCTGAGTTTCTGCCTATGAAGTCCAGAGCCACATGCATCTTGCTGATTGAGATATTTTGGGCACTGGGCACTGTGTTCGAGGTCCTCCTAGCGATTCTGGTGATGCCCACTCTGGGCTGGCGTTGGCTGCTTGGCCTTTCTACCATTCCTCTATTCATCTTCTCCATCCTGTGTTTTTGGCTACCAGAGAGTGCTCGATACGACGTGCTGACAGGGAATCAGGAAAAAGCTTTGGCCACACTGAAGCGCATCGCTACAGAAAACGGAGCACCAATGCCACTGGGAAAACTTATAGCTGCCAGACAGGAGGACCGTGGAAAGATTCAAGACTTATTTTCATCACACTTTCGCTGGACCACAGttctgctgtggtttatttgGTTCGCAAATGCCTTCTCTTACTATGGGCTGGTGCTGCTCACTACAGAGCTGTTTCAGGAGGGAGGTGCATGTGGAATGTCCAAAGGTAAAAAGAGGGAGCTCCGATGCAACTTGGAGTGTAAATATCTGAACTCTGACGACTACAAAGACCTGTTGTGGACAACCTTGTCTGAATTCCCAGGACTGCTGGTGCCACTGTGGGCTATTGATCGATTGGGAAGGAAGAAGACCATGGCATTGTGTTTCTTCGTCTTCTCTATGTGCATTATTCCACTCTATGGCTGTGTTGGGAGAGTTTCCATGACAGTGTTGATATTCATCGCCAGAGCTTTCATCGCAGGAGGATTCCAGACTGCTTATGTTTACACTCCAGAGGTGTACCCAACAGCGACCAGGGCTTTAGGTCTGGGAACGAGCAGTGGAATGGCCAGAGTCGGTGCCCTCATTACACCTTTTGTTGCACAGGTGATGTTGGAGTCATCTGTGTACCTGGCTCTGTCCGTGTACTGCTGCTGTTGCCTCCTAGCTGCTGTAGCCTCCTGTGCACTGCCAATTGAGACAACAGGCCGGGGCCTGCAGGAGTCCAGCCACCGCGAGTGGGGCCAGGAGATGGTGGGCCGCGCCTCCTCCCAAAGCTCAGGGGGAAACCCACCCTCCAGCTCCGGCTCCCAAGGCTGAGGAAGACACATTGGCTGGAGTAAAACTGAGAGAGGGGACCACAGTGAGGAAAAGAGGCAAGGAGAGGCAAAAAAGCTGGACCAGCTTTCGGTGTCCATCTCCAGTCCCATCCTAAGACTCTTCAGTTTATGCACCACAGTGGCTTCAGAGAGCCAGGCAGcacaatattatattatatagtcTTCAACCACCATTGCTGTCCCAATTTTGCCACTGAATAACTGCACACAGGGCGACAGCCAGGAAAGACCAAATGACCTACACAGGGGTTAAGATTGAGAAAATAAATGGTGGATGACATGTGAAACATTCTTGGACAAGTTAGAATTTAACTACTTCAAGCAAAGTATTTGAATGCTGCTTGTCTAATGATAGAGAAGCAAAAGAGACTAAAGAGAGTAAAAGTGTTAGCTTAAAATAACCATCTTCTTCTCAAAGAGCCTTAAAACTACCTATTCTATTTGTGCTTCGGAGACCTTCTCTTAACTTAAAAAAGGCTTTAACAAGCTGCGTCTATTTCATACTGGACAAAGATGTATAGATAAGAAAGAGCATCATCTTGTGCACACAAATGTAAGTTAAAATGTACAAGCTTTGTAAAAATTGAGGAACAGTTCCACATTGTCAAATTAACAAACCGTTGGATTAAAAAAGGTCTGGGGTTACTTCATTTAAGATCCACTTCTGTCAAGGTAGTGAAAGGGCATACTGCACAGTAAGTCACTGGGTTAAATATGTTCATTTTTCTTGTGACAGTCATATTTCACATTTCAACATGGATGATATTTGTCTGCTAAAGAATGTTGAGGCCTTTtaatttacaacaacctgacaaATCTGCCGAAGCCTTCATCAGATCATAATAACATCAGTGACATCATACAGTCGACAATATGTCATAATTATACTGTAACGCAACTGGAACAAGTCCACAGATCCTGGGCTGCATTTGAAGACAACATTATGTAAGTTAATGCTGAAGTATTAGTAAAAATCTAAATCTGAGTCTTTTCATCACCCAAAGCAGACTCAACCTAGTTAGTAAGAGttacatgatttaaaaaatgacattaacACGAGTATATGGTGTTACGATCTATAAATGCTGCGTCTCTCGCTCTACTCTACCAGACTTTGAGGCTGCGCACACATAGACCTACACGTGTATGTACACAACTATTTAGCAGGATGGTACATTCTGTCTTTCTGTATATAATGTATCAATACCTGGTTTAGTTGTTGTCTTTGACTTTTGTTTGTAACAAAGGTGATGTGAAGACAGACTTTGCCCAGTCTGAGTGACACACTCAGCAAAGttttgttgaaaaaataaaaagagattaACTAGTACAGGTCCAGCAAGCCGAATCTCTACCTGTCAGTGTTTGAGATTTAGTGCTGCATTAAGTGTCAGTGTGCACATATTCTTGTCAATGCACTGGATGTAAATGTGTATGATAACTAAAGTAAATAATCTTTCAAAAACTA

Function

symbol description
svop Predicted to enable transmembrane transporter activity. Predicted to be involved in transmembrane transport. Predicted to be located in synaptic vesicle.

NR:

description
synaptic vesicle 2-related protein

GO:

id name namespace
GO:0055085 transmembrane transport biological_process
GO:0016021 integral component of membrane cellular_component
GO:0022857 transmembrane transporter activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039804001.1 True 3377 mRNA 0.46 16 18985376 18992979

Neighbor

gene id symbol gene type direction distance location
alkbh2 alkbh2 coding upstream 12062 18970284 ~ 18973314 (+)
LOC120560963 NA coding upstream 22568 18961837 ~ 18962808 (+)
gatc gatc coding upstream 23892 18953824 ~ 18961484 (+)
LOC120560962 NA coding upstream 26398 18958006 ~ 18958978 (+)
sgsm1a sgsm1 coding upstream 33234 18924315 ~ 18952142 (+)
ssh1a ssh1 coding downstream 9317 19002296 ~ 19022881 (+)
LOC120560931 coro1c,LOC102291280,LOC106937262,LOC107393983,LOC107091240,LOC102218412 coding downstream 36428 19029407 ~ 19074342 (+)
sart3 sart3,LOC102781133 coding downstream 94818 19087797 ~ 19099604 (+)
cmklr1 NA coding downstream 127166 19120145 ~ 19122475 (+)
limk2 limk2 coding downstream 214800 19207779 ~ 19226925 (+)
G62796 NA non-coding upstream 2753 18966083 ~ 18982623 (+)
G62755 NA non-coding upstream 120569 18864575 ~ 18864807 (+)
G62741 NA non-coding upstream 212268 18772755 ~ 18773108 (+)
G62732 NA non-coding upstream 236880 18747490 ~ 18748496 (+)
G62667 NA non-coding upstream 348155 18636726 ~ 18637221 (+)
G62836 NA non-coding downstream 91955 19084934 ~ 19086862 (+)
LOC120560789 NA non-coding downstream 158554 19151533 ~ 19153584 (+)
G63005 LOC104920315,LOC103374896,LOC100704901 non-coding downstream 556431 19549410 ~ 19554906 (+)
G63007 NA non-coding downstream 562404 19555383 ~ 19562350 (+)
G63015 LOC107394186,LOC104941583 non-coding downstream 582582 19575561 ~ 19633642 (+)
mvk mvk,LOC102798305 other upstream 242977 18737518 ~ 18742399 (+)
acacb acacb other upstream 299913 18661157 ~ 18685463 (+)
tpcn1 tpcn1 other upstream 510645 18441347 ~ 18474731 (+)
tbx5b tbx5,LOC103470367 other upstream 565786 18407348 ~ 18419590 (+)
G62513 NA other upstream 654146 18330705 ~ 18331230 (+)
tmem119a LOC103353570,LOC104946818 other downstream 83582 19076561 ~ 19081654 (+)
rasl10a rasl10a other downstream 437422 19430401 ~ 19448950 (+)
c6h2orf68 c21h2orf68,c9h2orf68,LOC104941594,LOC103363183,LOC104920309 other downstream 766617 19759596 ~ 19763524 (+)
vps13a vps13a other downstream 1407968 20400947 ~ 20442093 (+)
wdr31 wdr31,LOC102796061 other downstream 1480672 20473651 ~ 20490586 (+)

Expression


Co-expression Network